RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 GPN3Q9UHW5 284 aaPredicted RBP8.56□□□□□ -1.04
LINC00838-201ENST00000562956 B3GALT1Q9Y5Z6 326 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 HEATR5AQ86XA9 2040 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 PNMA8CA0A1B0GUJ8 204 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 PMS2P1A4D2B8 440 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 B4DXG7 233 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 BLOC1S5-TXNDC5H3BN57 136 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 CDX4O14627 284 aaPredicted RBP8.56□□□□□ -1.04
LINC00838-201ENST00000562956 SNPHO15079 494 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 LRRTM2O43300 516 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 KLF7O75840 302 aaPredicted RBP8.56□□□□□ -1.04
LINC00838-201ENST00000562956 GYPBP06028 91 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 ENDOUP21128 410 aaKnown RBP8.56□□□□□ -1.04
LINC00838-201ENST00000562956 SLC2A5P22732 501 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 UGT2B10P36537 528 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 RPL4P36578 427 aaKnown RBP8.56□□□□□ -1.04
LINC00838-201ENST00000562956 P2RX1P51575 399 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 SLC16A1P53985 500 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 RPS7P62081 194 aaKnown RBP8.56□□□□□ -1.04
LINC00838-201ENST00000562956 CBFBQ13951 182 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 RSBN1Q5VWQ0 802 aaPredicted RBP8.56□□□□□ -1.04
LINC00838-201ENST00000562956 DPY19L2P2Q6ZN68 376 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 ADCK1Q86TW2 530 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 SLC43A2Q8N370 569 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 SDR9C7Q8NEX9 313 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 OR8K3Q8NH51 312 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 HGDQ93099 445 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 TRMT61AQ96FX7 289 aaKnown RBP8.56□□□□□ -1.04
LINC00838-201ENST00000562956 ZNF486Q96H40 463 aaPredicted RBP8.56□□□□□ -1.04
LINC00838-201ENST00000562956 LRFN5Q96NI6 719 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 RACGAP1Q9H0H5 632 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 GALNT9Q9HCQ5 603 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 KLHL1Q9NR64 748 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 ERVK13-1Q9NX77 482 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 NXT1Q9UKK6 140 aaKnown RBP8.56□□□□□ -1.04
LINC00838-201ENST00000562956 B3GNT3Q9Y2A9 372 aa8.56□□□□□ -1.04
LINC00838-201ENST00000562956 TBX1O43435 398 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 OR2J2O76002 312 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 IGF2P01344 180 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 CD59P13987 128 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 PGCP20142 388 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 CCKBRP32239 447 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 AQP2P41181 271 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 CRYBB2P43320 205 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 RPS5P46782 204 aaKnown RBP8.55□□□□□ -1.04
LINC00838-201ENST00000562956 ERVK-25P63136 954 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 EFR3AQ14156 821 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 PCOLCEQ15113 449 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 QPRTQ15274 297 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 COL28A1Q2UY09 1125 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 ZNF791Q3KP31 576 aaPredicted RBP8.55□□□□□ -1.04
LINC00838-201ENST00000562956 C1QL3Q5VWW1 255 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 BICRALQ6AI39 1079 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 ZNF517Q6ZMY9 492 aaPredicted RBP8.55□□□□□ -1.04
LINC00838-201ENST00000562956 SPATC1Q76KD6 591 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 TMEM99Q8N816 258 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 POC5Q8NA72 575 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 FAM98AQ8NCA5 519 aaKnown RBP8.55□□□□□ -1.04
LINC00838-201ENST00000562956 OR5L2Q8NGL0 311 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 OR9Q1Q8NGQ5 310 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 LILRB4Q8NHJ6 448 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 GPR119Q8TDV5 335 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 LIPHQ8WWY8 451 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 TAAR8Q969N4 342 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 CMKLR1Q99788 373 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 C12orf10Q9HB07 376 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 NRIP3Q9NQ35 241 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 NANSQ9NR45 359 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 DDX28Q9NUL7 540 aaKnown RBP8.55□□□□□ -1.04
LINC00838-201ENST00000562956 MYOTQ9UBF9 498 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 PTRH2Q9Y3E5 179 aaKnown RBP8.55□□□□□ -1.04
LINC00838-201ENST00000562956 SPIN1Q9Y657 262 aaPredicted RBP8.55□□□□□ -1.04
LINC00838-201ENST00000562956 IMPA2O14732 288 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 CDC40O60508 579 aaKnown RBP eCLIP8.55□□□□□ -1.04
LINC00838-201ENST00000562956 ZFAND5O76080 213 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 LALBAP00709 142 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 MRPL3P09001 348 aaKnown RBP8.55□□□□□ -1.04
LINC00838-201ENST00000562956 ASAH2BP0C7U1 165 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 GP1BBP13224 206 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 SPNP16150 400 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 CPEP16870 476 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 PAICSP22234 425 aaKnown RBP8.55□□□□□ -1.04
LINC00838-201ENST00000562956 CXCR1P25024 350 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 TUBA1BP68363 451 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 TIMM50Q3ZCQ8 353 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 RFPL4BQ6ZWI9 263 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 TUBA1AQ71U36 451 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 GHDCQ8N2G8 530 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 SMAP2Q8WU79 429 aaPredicted RBP8.55□□□□□ -1.04
LINC00838-201ENST00000562956 RASD2Q96D21 266 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 DMRTB1Q96MA1 342 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 DACH2Q96NX9 599 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 TBX5Q99593 518 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 ARHGAP9Q9BRR9 750 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 KATNB1Q9BVA0 655 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 JAM3Q9BX67 310 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 NEK6Q9HC98 313 aa8.55□□□□□ -1.04
LINC00838-201ENST00000562956 LOC102723996A0A087X1L8 192 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 SLC22A31A6NKX4 558 aa8.54□□□□□ -1.04
LINC00838-201ENST00000562956 C4orf47A7E2U8 309 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms