RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A TIM8P57744 87 aa8.85□□□□□ -0.99
TGA1tA(UGC)A STP1Q00947 519 aa8.85□□□□□ -0.99
TGA1tA(UGC)A RLP24Q07915 199 aaKnown RBP8.85□□□□□ -0.99
TGA1tA(UGC)A TLG2Q08144 397 aa8.85□□□□□ -0.99
TGA1tA(UGC)A FAL1Q12099 399 aaKnown RBP8.85□□□□□ -0.99
TGA1tA(UGC)A SGT2Q12118 346 aaKnown RBP8.85□□□□□ -0.99
TGA1tA(UGC)A CCH1P50077 2039 aa8.85□□□□□ -0.99
TGA1tA(UGC)A FAB1P34756 2278 aa8.84□□□□□ -0.99
TGA1tA(UGC)A TPK1P06244 397 aa8.84□□□□□ -0.99
TGA1tA(UGC)A ATP1P07251 545 aaKnown RBP8.84□□□□□ -0.99
TGA1tA(UGC)A CIT2P08679 460 aa8.84□□□□□ -0.99
TGA1tA(UGC)A YNR014WP53719 212 aa8.84□□□□□ -0.99
TGA1tA(UGC)A LCD1Q04377 747 aa8.84□□□□□ -0.99
TGA1tA(UGC)A SPP382Q06411 708 aaPredicted RBP8.84□□□□□ -0.99
TGA1tA(UGC)A CDD1Q06549 142 aa8.84□□□□□ -0.99
TGA1tA(UGC)A AFT2Q08957 416 aa8.84□□□□□ -0.99
TGA1tA(UGC)A PLP2Q12017 286 aa8.84□□□□□ -0.99
TGA1tA(UGC)A APC11Q12157 165 aa8.84□□□□□ -0.99
TGA1tA(UGC)A GIS3Q12418 502 aa8.84□□□□□ -0.99
TGA1tA(UGC)A APM4Q99186 491 aa8.84□□□□□ -0.99
TGA1tA(UGC)A GAL80P04387 435 aa8.83□□□□□ -1
TGA1tA(UGC)A SSB1P11484 613 aaKnown RBP8.83□□□□□ -1
TGA1tA(UGC)A SAC6P32599 642 aaKnown RBP8.83□□□□□ -1
TGA1tA(UGC)A PEX2P32800 271 aa8.83□□□□□ -1
TGA1tA(UGC)A SSB2P40150 613 aaKnown RBP8.83□□□□□ -1
TGA1tA(UGC)A MAF1P41910 395 aa8.83□□□□□ -1
TGA1tA(UGC)A POL31P46957 487 aa8.83□□□□□ -1
TGA1tA(UGC)A YGR237CP50089 785 aa8.83□□□□□ -1
TGA1tA(UGC)A CWC21Q03375 135 aaKnown RBP8.83□□□□□ -1
TGA1tA(UGC)A MLH2Q07980 695 aa8.83□□□□□ -1
TGA1tA(UGC)A TAF13P11747 167 aa8.82□□□□□ -1
TGA1tA(UGC)A NAT1P12945 854 aaKnown RBP8.82□□□□□ -1
TGA1tA(UGC)A OM45P16547 393 aa8.82□□□□□ -1
TGA1tA(UGC)A CDC42P19073 191 aa8.82□□□□□ -1
TGA1tA(UGC)A PSO2P30620 661 aa8.82□□□□□ -1
TGA1tA(UGC)A VPH1P32563 840 aaKnown RBP8.82□□□□□ -1
TGA1tA(UGC)A RIM4P38741 713 aa8.82□□□□□ -1
TGA1tA(UGC)A RVS167P39743 482 aaKnown RBP8.82□□□□□ -1
TGA1tA(UGC)A FTR1P40088 404 aa8.82□□□□□ -1
TGA1tA(UGC)A FYV8P46949 817 aaKnown RBP8.82□□□□□ -1
TGA1tA(UGC)A NUT1P53114 1132 aa8.82□□□□□ -1
TGA1tA(UGC)A MAP1Q01662 387 aaKnown RBP RIP-Chip data8.82□□□□□ -1not detected
TGA1tA(UGC)A COG4Q06096 861 aa8.82□□□□□ -1
TGA1tA(UGC)A SDH5Q08230 162 aa8.82□□□□□ -1
TGA1tA(UGC)A SGO1Q08490 590 aa8.82□□□□□ -1
TGA1tA(UGC)A FMP27Q06179 2628 aa8.82□□□□□ -1
TGA1tA(UGC)A CHS2P14180 963 aa8.81□□□□□ -1
TGA1tA(UGC)A PEX1P24004 1043 aa8.81□□□□□ -1
TGA1tA(UGC)A RAD27P26793 382 aa8.81□□□□□ -1
TGA1tA(UGC)A RDH54P38086 958 aa8.81□□□□□ -1
TGA1tA(UGC)A NPR3P38742 1146 aa8.81□□□□□ -1
TGA1tA(UGC)A ZAP1P47043 880 aa8.81□□□□□ -1
TGA1tA(UGC)A ADA2Q02336 434 aa8.81□□□□□ -1
TGA1tA(UGC)A VMS1Q04311 632 aaKnown RBP8.81□□□□□ -1
TGA1tA(UGC)A YML083CQ04526 418 aa8.81□□□□□ -1
TGA1tA(UGC)A REC8Q12188 680 aa8.81□□□□□ -1
TGA1tA(UGC)A MNL2Q12205 849 aa8.81□□□□□ -1
TGA1tA(UGC)A TRS33Q99394 268 aa8.81□□□□□ -1
TGA1tA(UGC)A APE1P14904 514 aa8.8□□□□□ -1
TGA1tA(UGC)A IME1P21190 360 aa8.8□□□□□ -1
TGA1tA(UGC)A SPO11P23179 398 aa8.8□□□□□ -1
TGA1tA(UGC)A GSY2P27472 705 aa8.8□□□□□ -1
TGA1tA(UGC)A SLA2P33338 968 aa8.8□□□□□ -1
TGA1tA(UGC)A PIN4P34217 668 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
TGA1tA(UGC)A AGP2P38090 596 aa8.8□□□□□ -1
TGA1tA(UGC)A SIP5P40210 489 aaKnown RBP8.8□□□□□ -1
TGA1tA(UGC)A DJP1P40564 432 aa8.8□□□□□ -1
TGA1tA(UGC)A NOP13P53883 403 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
TGA1tA(UGC)A PPM1Q04081 328 aa8.8□□□□□ -1
TGA1tA(UGC)A YAP7Q08182 245 aa8.8□□□□□ -1
TGA1tA(UGC)A ETT1Q08421 412 aaKnown RBP8.8□□□□□ -1
TGA1tA(UGC)A SLX4Q12098 748 aa8.8□□□□□ -1
TGA1tA(UGC)A SNF1P06782 633 aaKnown RBP8.79□□□□□ -1
TGA1tA(UGC)A CHS1P08004 1131 aa8.79□□□□□ -1
TGA1tA(UGC)A KEX2P13134 814 aa8.79□□□□□ -1
TGA1tA(UGC)A MSP1P28737 362 aa8.79□□□□□ -1
TGA1tA(UGC)A SWI3P32591 825 aa8.79□□□□□ -1
TGA1tA(UGC)A BFA1P47113 574 aa8.79□□□□□ -1
TGA1tA(UGC)A YDR344CQ05510 147 aa8.79□□□□□ -1
TGA1tA(UGC)A RAD59Q12223 238 aa8.79□□□□□ -1
TGA1tA(UGC)A TFC8Q12308 588 aa8.79□□□□□ -1
TGA1tA(UGC)A YDL206WQ12424 762 aa8.79□□□□□ -1
TGA1tA(UGC)A SPE1P08432 466 aa8.78□□□□□ -1
TGA1tA(UGC)A PGS1P25578 521 aa8.78□□□□□ -1
TGA1tA(UGC)A COQ8P27697 501 aa8.78□□□□□ -1
TGA1tA(UGC)A CDC11P32458 415 aa8.78□□□□□ -1
TGA1tA(UGC)A EFM2P38347 419 aa8.78□□□□□ -1
TGA1tA(UGC)A PEX28P38848 579 aa8.78□□□□□ -1
TGA1tA(UGC)A MOB1P40484 314 aa8.78□□□□□ -1
TGA1tA(UGC)A SLG1P54867 378 aa8.78□□□□□ -1
TGA1tA(UGC)A RPA49Q01080 415 aaPredicted RBP8.78□□□□□ -1
TGA1tA(UGC)A EBS1Q03466 884 aaKnown RBP8.78□□□□□ -1
TGA1tA(UGC)A TIF35Q04067 274 aaKnown RBP8.78□□□□□ -1
TGA1tA(UGC)A YLR257WQ06146 321 aaKnown RBP8.78□□□□□ -1
TGA1tA(UGC)A YPR027CQ12079 277 aa8.78□□□□□ -1
TGA1tA(UGC)A COX11P19516 300 aaKnown RBP8.77□□□□□ -1.01
TGA1tA(UGC)A VPS3P23643 1011 aa8.77□□□□□ -1.01
TGA1tA(UGC)A IME2P32581 645 aa8.77□□□□□ -1.01
TGA1tA(UGC)A PSY4P38193 441 aa8.77□□□□□ -1.01
TGA1tA(UGC)A SIF2P38262 535 aa8.77□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 62.7 ms