RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C APT2P36973 181 aa2.34□□□□□ -2.03
NIP100YPL174C ELO3P40319 345 aa2.34□□□□□ -2.03
NIP100YPL174C MUP1P50276 574 aa2.34□□□□□ -2.03
NIP100YPL174C PPM2Q08282 695 aa2.34□□□□□ -2.03
NIP100YPL174C FRE5Q08908 694 aa2.34□□□□□ -2.03
NIP100YPL174C ACF2Q12168 779 aa2.34□□□□□ -2.03
NIP100YPL174C HAL9Q12180 1030 aa2.34□□□□□ -2.03
NIP100YPL174C YOL098CQ12496 1037 aa2.34□□□□□ -2.03
NIP100YPL174C AFR1P33304 620 aa2.34□□□□□ -2.04
NIP100YPL174C CTF8P38877 133 aa2.34□□□□□ -2.04
NIP100YPL174C YKE2P52553 114 aa2.34□□□□□ -2.04
NIP100YPL174C LRS4Q04087 347 aaKnown RBP2.34□□□□□ -2.04
NIP100YPL174C NSE3Q05541 303 aa2.34□□□□□ -2.04
NIP100YPL174C OMS1Q06668 471 aa2.34□□□□□ -2.04
NIP100YPL174C YLR040CQ07988 224 aa2.34□□□□□ -2.04
NIP100YPL174C CAN1P04817 590 aa2.33□□□□□ -2.04
NIP100YPL174C TRP4P07285 380 aaPredicted RBP2.33□□□□□ -2.04
NIP100YPL174C CIT2P08679 460 aa2.33□□□□□ -2.04
NIP100YPL174C YCL002CP25565 263 aa2.33□□□□□ -2.04
NIP100YPL174C HSV2P50079 448 aaPredicted RBP2.33□□□□□ -2.04
NIP100YPL174C TAF8Q03750 510 aa2.33□□□□□ -2.04
NIP100YPL174C RLP7P40693 322 aaKnown RBP2.33□□□□□ -2.04
NIP100YPL174C GYP8P43570 497 aa2.33□□□□□ -2.04
NIP100YPL174C OSW7P43611 510 aa2.33□□□□□ -2.04
NIP100YPL174C COX18P53239 316 aa2.33□□□□□ -2.04
NIP100YPL174C ORC4P54791 529 aa2.33□□□□□ -2.04
NIP100YPL174C BDF2Q07442 638 aa2.33□□□□□ -2.04
NIP100YPL174C PPR1P07272 904 aaPredicted RBP2.32□□□□□ -2.04
NIP100YPL174C STE14P32584 239 aa2.32□□□□□ -2.04
NIP100YPL174C PCL5P38794 229 aa2.32□□□□□ -2.04
NIP100YPL174C RTA1P53047 317 aa2.32□□□□□ -2.04
NIP100YPL174C YGR283CP53336 341 aaPredicted RBP2.32□□□□□ -2.04
NIP100YPL174C MOH1P38191 138 aa2.32□□□□□ -2.04
NIP100YPL174C STB4P50104 949 aa2.32□□□□□ -2.04
NIP100YPL174C NPY1P53164 384 aa2.32□□□□□ -2.04
NIP100YPL174C GAD1Q04792 585 aa2.32□□□□□ -2.04
NIP100YPL174C THI4P32318 326 aa2.31□□□□□ -2.04
NIP100YPL174C PPS1P38148 807 aa2.31□□□□□ -2.04
NIP100YPL174C CHZ1P40019 153 aaPredicted RBP2.31□□□□□ -2.04
NIP100YPL174C PFA3P42836 336 aa2.31□□□□□ -2.04
NIP100YPL174C BFA1P47113 574 aa2.31□□□□□ -2.04
NIP100YPL174C ASI2P53895 289 aa2.31□□□□□ -2.04
NIP100YPL174C YLR415CO13578 112 aa2.31□□□□□ -2.04
NIP100YPL174C CTF13P35203 478 aa2.31□□□□□ -2.04
NIP100YPL174C SPC42P36094 363 aa2.31□□□□□ -2.04
NIP100YPL174C BET3P36149 193 aa2.31□□□□□ -2.04
NIP100YPL174C CHS7P38843 316 aa2.31□□□□□ -2.04
NIP100YPL174C YIR042CP40586 236 aa2.31□□□□□ -2.04
NIP100YPL174C AMA1P50082 593 aa2.31□□□□□ -2.04
NIP100YPL174C MUS81Q04149 632 aaPredicted RBP2.31□□□□□ -2.04
NIP100YPL174C YLR125WQ12138 136 aa2.31□□□□□ -2.04
NIP100YPL174C KIN3P22209 435 aa2.3□□□□□ -2.04
NIP100YPL174C TIM23P32897 222 aa2.3□□□□□ -2.04
NIP100YPL174C STO1P34160 861 aaKnown RBP2.3□□□□□ -2.04
NIP100YPL174C BUL2Q03758 920 aaKnown RBP2.3□□□□□ -2.04
NIP100YPL174C ERR1P0CX10 437 aa2.3□□□□□ -2.04
NIP100YPL174C ERR2P0CX11 437 aa2.3□□□□□ -2.04
NIP100YPL174C PHO8P11491 566 aa2.3□□□□□ -2.04
NIP100YPL174C SPC29P33419 253 aa2.3□□□□□ -2.04
NIP100YPL174C YHL017WP38745 532 aa2.3□□□□□ -2.04
NIP100YPL174C REV7P38927 245 aa2.3□□□□□ -2.04
NIP100YPL174C GND2P53319 492 aa2.3□□□□□ -2.04
NIP100YPL174C MUK1Q02866 612 aa2.3□□□□□ -2.04
NIP100YPL174C LAS17Q12446 633 aa2.3□□□□□ -2.04
NIP100YPL174C MVD1P32377 396 aaKnown RBP2.29□□□□□ -2.04
NIP100YPL174C PBP2P38151 413 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
NIP100YPL174C GDH3P39708 457 aa2.29□□□□□ -2.04
NIP100YPL174C NUP82P40368 713 aa2.29□□□□□ -2.04
NIP100YPL174C PRP31P49704 494 aaPredicted RBP2.29□□□□□ -2.04
NIP100YPL174C RIA1P53893 1110 aa2.29□□□□□ -2.04
NIP100YPL174C TUB3P09734 445 aaKnown RBP2.29□□□□□ -2.04
NIP100YPL174C YBR259WP38338 688 aa2.29□□□□□ -2.04
NIP100YPL174C ZIP2P53061 704 aa2.29□□□□□ -2.04
NIP100YPL174C RAD18P10862 487 aa2.28□□□□□ -2.04
NIP100YPL174C GFA1P14742 717 aaKnown RBP2.28□□□□□ -2.04
NIP100YPL174C HCA4P20448 770 aaKnown RBP2.28□□□□□ -2.04
NIP100YPL174C SEC15P22224 910 aa2.28□□□□□ -2.04
NIP100YPL174C PPG1P32838 368 aa2.28□□□□□ -2.04
NIP100YPL174C YHR020WP38708 688 aaKnown RBP2.28□□□□□ -2.04
NIP100YPL174C ORC1P54784 914 aaPredicted RBP2.28□□□□□ -2.04
NIP100YPL174C SSL2Q00578 843 aa2.28□□□□□ -2.04
NIP100YPL174C CTK1Q03957 528 aaKnown RBP2.28□□□□□ -2.04
NIP100YPL174C TMN2Q04562 672 aa2.28□□□□□ -2.04
NIP100YPL174C ADY4Q05955 493 aa2.28□□□□□ -2.04
NIP100YPL174C IRC13Q08630 104 aa2.28□□□□□ -2.04
NIP100YPL174C TGL5Q12043 749 aa2.28□□□□□ -2.04
NIP100YPL174C TRM13Q12383 476 aa2.28□□□□□ -2.04
NIP100YPL174C DMC1P25453 334 aa2.28□□□□□ -2.04
NIP100YPL174C PPZ2P33329 710 aa2.28□□□□□ -2.04
NIP100YPL174C YKR075CP36155 307 aa2.28□□□□□ -2.04
NIP100YPL174C LGE1Q02796 332 aaKnown RBP2.28□□□□□ -2.04
NIP100YPL174C ATP25Q03153 612 aa2.28□□□□□ -2.04
NIP100YPL174C POB3Q04636 552 aaKnown RBP2.28□□□□□ -2.04
NIP100YPL174C SGO1Q08490 590 aa2.28□□□□□ -2.04
NIP100YPL174C TAD3Q9URQ3 322 aa2.28□□□□□ -2.04
NIP100YPL174C VBA3P25594 458 aa2.27□□□□□ -2.05
NIP100YPL174C RPN7Q06103 429 aaKnown RBP2.27□□□□□ -2.05
NIP100YPL174C FBP1P09201 348 aa2.27□□□□□ -2.05
NIP100YPL174C LAT1P12695 482 aaKnown RBP2.27□□□□□ -2.05
NIP100YPL174C SFP1P32432 683 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms