RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeast

Gene RET3, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET3	YPL010W	YOR352W	Q08816	343 aa		4.91	□□□□□ -1.62
RET3	YPL010W	FAS2	P19097	1887 aa	Known RBP	4.91	□□□□□ -1.62
RET3	YPL010W	CYC1	P00044	109 aa	Predicted RBP	4.9	□□□□□ -1.63
RET3	YPL010W	PMA1	P05030	918 aa	Known RBP	4.9	□□□□□ -1.63
RET3	YPL010W	GCR1	P07261	785 aa		4.9	□□□□□ -1.63
RET3	YPL010W	DBP5	P20449	482 aa	Known RBP	4.9	□□□□□ -1.63
RET3	YPL010W	KEL1	P38853	1164 aa	Known RBP	4.9	□□□□□ -1.63
RET3	YPL010W	UBP12	P39538	1254 aa		4.9	□□□□□ -1.63
RET3	YPL010W	LYS14	P40971	790 aa		4.9	□□□□□ -1.63
RET3	YPL010W	MPP10	P47083	593 aa	Known RBP	4.9	□□□□□ -1.63
RET3	YPL010W	VPS62	P53285	467 aa		4.9	□□□□□ -1.63
RET3	YPL010W	RSM24	Q03976	319 aa		4.9	□□□□□ -1.63
RET3	YPL010W	RRP15	Q06511	250 aa	Predicted RBP	4.9	□□□□□ -1.63
RET3	YPL010W	CFT2	Q12102	859 aa	Predicted RBP	4.9	□□□□□ -1.63
RET3	YPL010W	YER152C	P10356	443 aa		4.89	□□□□□ -1.63
RET3	YPL010W	CDC60	P26637	1090 aa	Known RBP	4.89	□□□□□ -1.63
RET3	YPL010W	RFC5	P38251	354 aa		4.89	□□□□□ -1.63
RET3	YPL010W	TAT2	P38967	592 aa		4.89	□□□□□ -1.63
RET3	YPL010W	MPH1	P40562	993 aa		4.89	□□□□□ -1.63
RET3	YPL010W	NOP2	P40991	618 aa	Known RBP	4.89	□□□□□ -1.63
RET3	YPL010W	POL32	P47110	350 aa		4.89	□□□□□ -1.63
RET3	YPL010W	RMD1	Q03441	430 aa		4.89	□□□□□ -1.63
RET3	YPL010W	SIZ1	Q04195	904 aa		4.89	□□□□□ -1.63
RET3	YPL010W	ATE1	P16639	503 aa		4.88	□□□□□ -1.63
RET3	YPL010W	CTS1	P29029	562 aa		4.88	□□□□□ -1.63
RET3	YPL010W	RPT3	P33298	428 aa	Known RBP	4.88	□□□□□ -1.63
RET3	YPL010W	SHM2	P37291	469 aa	Known RBP	4.88	□□□□□ -1.63
RET3	YPL010W	SPT20	P50875	604 aa		4.88	□□□□□ -1.63
RET3	YPL010W	PLB2	Q03674	706 aa		4.88	□□□□□ -1.63
RET3	YPL010W	MRL1	Q06815	381 aa		4.88	□□□□□ -1.63
RET3	YPL010W	SRM1	P21827	482 aa		4.87	□□□□□ -1.63
RET3	YPL010W	HEM3	P28789	327 aa		4.87	□□□□□ -1.63
RET3	YPL010W	ACA1	P39970	489 aa		4.87	□□□□□ -1.63
RET3	YPL010W	SNU71	P53207	620 aa	Known RBP	4.87	□□□□□ -1.63
RET3	YPL010W	FMP30	Q02883	468 aa		4.87	□□□□□ -1.63
RET3	YPL010W	ESF1	Q06344	628 aa	Known RBP	4.87	□□□□□ -1.63
RET3	YPL010W	ECM30	Q06673	1274 aa		4.87	□□□□□ -1.63
RET3	YPL010W	RTT10	Q08924	1013 aa		4.87	□□□□□ -1.63
RET3	YPL010W	PCL8	Q08966	492 aa		4.87	□□□□□ -1.63
RET3	YPL010W	CDC6	P09119	513 aa		4.86	□□□□□ -1.63
RET3	YPL010W	KIN2	P13186	1147 aa	Known RBP	4.86	□□□□□ -1.63
RET3	YPL010W	MCM2	P29469	868 aa		4.86	□□□□□ -1.63
RET3	YPL010W	MLS1	P30952	554 aa		4.86	□□□□□ -1.63
RET3	YPL010W	SWC3	P31376	625 aa		4.86	□□□□□ -1.63
RET3	YPL010W	YBL028C	P38202	106 aa		4.86	□□□□□ -1.63
RET3	YPL010W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
RET3	YPL010W	MXR1	P40029	184 aa		4.86	□□□□□ -1.63
RET3	YPL010W	AIM21	P40563	679 aa		4.86	□□□□□ -1.63
RET3	YPL010W	PBP1	P53297	722 aa	Known RBP	4.86	□□□□□ -1.63
RET3	YPL010W	HEF3	P53978	1044 aa	Known RBP	4.86	□□□□□ -1.63
RET3	YPL010W	YDL144C	Q07589	356 aa		4.86	□□□□□ -1.63
RET3	YPL010W	ICL2	Q12031	575 aa		4.86	□□□□□ -1.63
RET3	YPL010W	GNT1	Q12096	491 aa		4.86	□□□□□ -1.63
RET3	YPL010W	RIB2	Q12362	591 aa	Known RBP	4.86	□□□□□ -1.63
RET3	YPL010W	YOR131C	Q12486	218 aa		4.86	□□□□□ -1.63
RET3	YPL010W	GAL10	P04397	699 aa		4.85	□□□□□ -1.63
RET3	YPL010W	PIF1	P07271	859 aa		4.85	□□□□□ -1.63
RET3	YPL010W	STE11	P23561	717 aa		4.85	□□□□□ -1.63
RET3	YPL010W	PER1	P25625	357 aa		4.85	□□□□□ -1.63
RET3	YPL010W	RAD27	P26793	382 aa		4.85	□□□□□ -1.63
RET3	YPL010W	RER2	P35196	286 aa		4.85	□□□□□ -1.63
RET3	YPL010W	PTK1	P36002	662 aa	Predicted RBP	4.85	□□□□□ -1.63
RET3	YPL010W	FYV10	P40492	516 aa		4.85	□□□□□ -1.63
RET3	YPL010W	YFL054C	P43549	646 aa		4.85	□□□□□ -1.63
RET3	YPL010W	TMA46	Q12000	345 aa	Known RBP	4.85	□□□□□ -1.63
RET3	YPL010W	SVS1	Q12254	260 aa		4.85	□□□□□ -1.63
RET3	YPL010W	RRI2	Q12348	645 aa		4.85	□□□□□ -1.63
RET3	YPL010W	HKR1	P41809	1802 aa		4.85	□□□□□ -1.63
RET3	YPL010W	SNF3	P10870	884 aa		4.84	□□□□□ -1.63
RET3	YPL010W	SEC18	P18759	758 aa	Known RBP	4.84	□□□□□ -1.63
RET3	YPL010W	CDC20	P26309	610 aa		4.84	□□□□□ -1.63
RET3	YPL010W	UIP5	P36137	443 aa		4.84	□□□□□ -1.63
RET3	YPL010W	FUN12	P39730	1002 aa	Known RBP	4.84	□□□□□ -1.63
RET3	YPL010W	ROT1	Q03691	256 aa		4.84	□□□□□ -1.63
RET3	YPL010W	TIF35	Q04067	274 aa	Known RBP	4.84	□□□□□ -1.63
RET3	YPL010W	RXT3	Q07458	294 aa		4.84	□□□□□ -1.63
RET3	YPL010W	MET7	Q08645	548 aa		4.84	□□□□□ -1.63
RET3	YPL010W	CMP2	P14747	604 aa		4.83	□□□□□ -1.64
RET3	YPL010W	BAS1	P22035	811 aa		4.83	□□□□□ -1.64
RET3	YPL010W	ASF1	P32447	279 aa		4.83	□□□□□ -1.64
RET3	YPL010W	RAD24	P32641	659 aa		4.83	□□□□□ -1.64
RET3	YPL010W	GEM1	P39722	662 aa		4.83	□□□□□ -1.64
RET3	YPL010W	PIP2	P52960	996 aa		4.83	□□□□□ -1.64
RET3	YPL010W	SPR28	Q04921	423 aa		4.83	□□□□□ -1.64
RET3	YPL010W	INM2	Q05533	292 aa		4.83	□□□□□ -1.64
RET3	YPL010W	ACM1	Q08981	209 aa		4.83	□□□□□ -1.64
RET3	YPL010W	SUT2	Q12286	268 aa		4.83	□□□□□ -1.64
RET3	YPL010W	YMR084W	A2P2R3	262 aa		4.82	□□□□□ -1.64
RET3	YPL010W	CYB2	P00175	591 aa		4.82	□□□□□ -1.64
RET3	YPL010W	TUB2	P02557	457 aa	Known RBP	4.82	□□□□□ -1.64
RET3	YPL010W	DAL5	P15365	543 aa		4.82	□□□□□ -1.64
RET3	YPL010W	VMA2	P16140	517 aa	Known RBP	4.82	□□□□□ -1.64
RET3	YPL010W	ACE2	P21192	770 aa		4.82	□□□□□ -1.64
RET3	YPL010W	CST26	P38226	397 aa		4.82	□□□□□ -1.64
RET3	YPL010W	YIR042C	P40586	236 aa		4.82	□□□□□ -1.64
RET3	YPL010W	MSC2	Q03455	724 aa		4.82	□□□□□ -1.64
RET3	YPL010W	YML020W	Q03722	664 aa		4.82	□□□□□ -1.64
RET3	YPL010W	YDL124W	Q07551	312 aa	Known RBP	4.82	□□□□□ -1.64
RET3	YPL010W	GPB1	Q08886	897 aa		4.82	□□□□□ -1.64
RET3	YPL010W	MDM20	Q12387	796 aa	Known RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms