RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	ASM4	Q05166	528 aa		4.19	□□□□□ -1.74
RUD3	YOR216C	TAF3	Q12297	353 aa		4.19	□□□□□ -1.74
RUD3	YOR216C	STE5	P32917	917 aa		4.18	□□□□□ -1.74
RUD3	YOR216C	HIS7	P33734	552 aa	Known RBP	4.18	□□□□□ -1.74
RUD3	YOR216C	PZF1	P39933	429 aa		4.18	□□□□□ -1.74
RUD3	YOR216C	SSL2	Q00578	843 aa		4.18	□□□□□ -1.74
RUD3	YOR216C	YPR071W	Q12346	211 aa		4.18	□□□□□ -1.74
RUD3	YOR216C	YLR415C	O13578	112 aa		4.18	□□□□□ -1.74
RUD3	YOR216C	LAT1	P12695	482 aa	Known RBP	4.18	□□□□□ -1.74
RUD3	YOR216C	FMP52	P40008	231 aa		4.18	□□□□□ -1.74
RUD3	YOR216C	IRR1	P40541	1150 aa		4.18	□□□□□ -1.74
RUD3	YOR216C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
RUD3	YOR216C	DAM1	P53267	343 aa		4.18	□□□□□ -1.74
RUD3	YOR216C	CYS3	P31373	394 aa	Known RBP	4.17	□□□□□ -1.74
RUD3	YOR216C	NGG1	P32494	702 aa		4.17	□□□□□ -1.74
RUD3	YOR216C	BCD1	P38772	366 aa		4.17	□□□□□ -1.74
RUD3	YOR216C	SAK1	P38990	1142 aa		4.17	□□□□□ -1.74
RUD3	YOR216C	HOS4	P40480	1083 aa		4.17	□□□□□ -1.74
RUD3	YOR216C	PFA3	P42836	336 aa		4.17	□□□□□ -1.74
RUD3	YOR216C	CCT7	P42943	550 aa	Known RBP	4.17	□□□□□ -1.74
RUD3	YOR216C	HSV2	P50079	448 aa	Predicted RBP	4.17	□□□□□ -1.74
RUD3	YOR216C	TEL2	P53038	688 aa		4.17	□□□□□ -1.74
RUD3	YOR216C	SMX3	P54999	86 aa	Predicted RBP	4.17	□□□□□ -1.74
RUD3	YOR216C	ENV7	Q12003	364 aa		4.17	□□□□□ -1.74
RUD3	YOR216C	TGL5	Q12043	749 aa		4.17	□□□□□ -1.74
RUD3	YOR216C	EMP70	P32802	667 aa		4.16	□□□□□ -1.74
RUD3	YOR216C	YJL206C	P39529	758 aa		4.16	□□□□□ -1.74
RUD3	YOR216C	SSY5	P47002	699 aa		4.16	□□□□□ -1.74
RUD3	YOR216C	MRI1	Q06489	411 aa	Known RBP	4.16	□□□□□ -1.74
RUD3	YOR216C	YUR1	P26725	428 aa		4.15	□□□□□ -1.75
RUD3	YOR216C	YBR284W	P38150	797 aa		4.15	□□□□□ -1.75
RUD3	YOR216C	PFD1	P46988	109 aa		4.15	□□□□□ -1.75
RUD3	YOR216C	YOR022C	Q12204	715 aa		4.15	□□□□□ -1.75
RUD3	YOR216C	PRP9	P19736	530 aa	Known RBP	4.14	□□□□□ -1.75
RUD3	YOR216C	SPF1	P39986	1215 aa	Known RBP	4.14	□□□□□ -1.75
RUD3	YOR216C	UBC11	P52492	156 aa		4.14	□□□□□ -1.75
RUD3	YOR216C	RPN13	O13563	156 aa		4.13	□□□□□ -1.75
RUD3	YOR216C	SPO11	P23179	398 aa		4.13	□□□□□ -1.75
RUD3	YOR216C	YBR184W	P38299	523 aa		4.13	□□□□□ -1.75
RUD3	YOR216C	ATG11	Q12527	1178 aa		4.13	□□□□□ -1.75
RUD3	YOR216C	HIR1	P32479	840 aa		4.12	□□□□□ -1.75
RUD3	YOR216C	YEL020C	P39994	560 aa		4.12	□□□□□ -1.75
RUD3	YOR216C	NOG2	P53742	486 aa	Known RBP	4.12	□□□□□ -1.75
RUD3	YOR216C	DAL7	P21826	554 aa		4.11	□□□□□ -1.75
RUD3	YOR216C	NAP1	P25293	417 aa	Known RBP	4.11	□□□□□ -1.75
RUD3	YOR216C	ORC2	P32833	620 aa		4.11	□□□□□ -1.75
RUD3	YOR216C	PET10	P36139	283 aa		4.11	□□□□□ -1.75
RUD3	YOR216C	SIC1	P38634	284 aa		4.11	□□□□□ -1.75
RUD3	YOR216C	ALR2	P43553	858 aa		4.11	□□□□□ -1.75
RUD3	YOR216C	JIP5	Q06214	492 aa	Predicted RBP	4.11	□□□□□ -1.75
RUD3	YOR216C	GPR1	Q12361	961 aa		4.11	□□□□□ -1.75
RUD3	YOR216C	MSD1	P15179	658 aa	Known RBP	4.11	□□□□□ -1.75
RUD3	YOR216C	YCL002C	P25565	263 aa		4.11	□□□□□ -1.75
RUD3	YOR216C	CDC11	P32458	415 aa		4.11	□□□□□ -1.75
RUD3	YOR216C	NDC80	P40460	691 aa		4.11	□□□□□ -1.75
RUD3	YOR216C	BAP3	P41815	604 aa		4.11	□□□□□ -1.75
RUD3	YOR216C	YAP1802	P53309	568 aa		4.11	□□□□□ -1.75
RUD3	YOR216C	PRC1	P00729	532 aa		4.1	□□□□□ -1.75
RUD3	YOR216C	UBS1	P38290	277 aa		4.1	□□□□□ -1.75
RUD3	YOR216C	LRS4	Q04087	347 aa	Known RBP	4.1	□□□□□ -1.75
RUD3	YOR216C	TDA5	Q06417	326 aa	Known RBP	4.1	□□□□□ -1.75
RUD3	YOR216C	FMP25	Q08023	583 aa		4.1	□□□□□ -1.75
RUD3	YOR216C	SIR3	P06701	978 aa		4.09	□□□□□ -1.75
RUD3	YOR216C	GAT1	P43574	510 aa		4.09	□□□□□ -1.75
RUD3	YOR216C	BNA3	P47039	444 aa	Known RBP	4.09	□□□□□ -1.75
RUD3	YOR216C	UTP8	P53276	713 aa	Known RBP	4.09	□□□□□ -1.75
RUD3	YOR216C	SEG1	Q04279	960 aa		4.09	□□□□□ -1.75
RUD3	YOR216C	RSC3	Q06639	885 aa		4.09	□□□□□ -1.75
RUD3	YOR216C	THI21	Q08975	551 aa		4.09	□□□□□ -1.75
RUD3	YOR216C	HBN1	Q96VH4	193 aa		4.09	□□□□□ -1.75
RUD3	YOR216C	TOP3	P13099	656 aa		4.08	□□□□□ -1.76
RUD3	YOR216C	PAC2	P39937	518 aa		4.08	□□□□□ -1.76
RUD3	YOR216C	SCS3	P53012	380 aa		4.08	□□□□□ -1.76
RUD3	YOR216C	TAD1	P53065	400 aa		4.08	□□□□□ -1.76
RUD3	YOR216C	TEX1	P53851	422 aa	Known RBP	4.08	□□□□□ -1.76
RUD3	YOR216C	RIM13	Q03792	727 aa		4.08	□□□□□ -1.76
RUD3	YOR216C	UBX5	Q06682	500 aa		4.08	□□□□□ -1.76
RUD3	YOR216C	REV7	P38927	245 aa		4.07	□□□□□ -1.76
RUD3	YOR216C	VAC8	P39968	578 aa		4.07	□□□□□ -1.76
RUD3	YOR216C	NIT3	P49954	291 aa		4.07	□□□□□ -1.76
RUD3	YOR216C	SCT1	P32784	759 aa		4.06	□□□□□ -1.76
RUD3	YOR216C	YBR259W	P38338	688 aa		4.06	□□□□□ -1.76
RUD3	YOR216C	ALD6	P54115	500 aa	Known RBP	4.06	□□□□□ -1.76
RUD3	YOR216C	PYC1	P11154	1178 aa	Known RBP	4.05	□□□□□ -1.76
RUD3	YOR216C	HOM2	P13663	365 aa	Known RBP	4.05	□□□□□ -1.76
RUD3	YOR216C	VPS34	P22543	875 aa		4.05	□□□□□ -1.76
RUD3	YOR216C	GLG1	P36143	616 aa		4.05	□□□□□ -1.76
RUD3	YOR216C	BDH2	P39713	417 aa		4.05	□□□□□ -1.76
RUD3	YOR216C	LTP1	P40347	161 aa		4.05	□□□□□ -1.76
RUD3	YOR216C	MRK1	P50873	501 aa		4.05	□□□□□ -1.76
RUD3	YOR216C	SVF1	Q05515	481 aa		4.05	□□□□□ -1.76
RUD3	YOR216C	SAP190	P36123	1033 aa		4.05	□□□□□ -1.76
RUD3	YOR216C	CCT3	P39077	534 aa	Known RBP	4.05	□□□□□ -1.76
RUD3	YOR216C	CTR1	P49573	406 aa		4.05	□□□□□ -1.76
RUD3	YOR216C	OSW1	Q08692	278 aa		4.05	□□□□□ -1.76
RUD3	YOR216C	YKL033W-A	Q86ZR7	236 aa		4.05	□□□□□ -1.76
RUD3	YOR216C	EMC3	P36039	253 aa		4.04	□□□□□ -1.76
RUD3	YOR216C	ARG2	P40360	574 aa		4.04	□□□□□ -1.76
RUD3	YOR216C	GYP8	P43570	497 aa		4.04	□□□□□ -1.76
RUD3	YOR216C	MTR3	P48240	250 aa	Predicted RBP	4.04	□□□□□ -1.76

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