RNA–Protein interactions for RNA: YNR023W

SNF12, Transcript of 73 kDa subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF12, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF12YNR023W SSB2P40150 613 aaKnown RBP3.39□□□□□ -1.87
SNF12YNR023W CEP3P40969 608 aa3.39□□□□□ -1.87
SNF12YNR023W PER1P25625 357 aa3.39□□□□□ -1.87
SNF12YNR023W PCL2P25693 308 aa3.39□□□□□ -1.87
SNF12YNR023W HOG1P32485 435 aa3.39□□□□□ -1.87
SNF12YNR023W MGS1P40151 587 aa3.39□□□□□ -1.87
SNF12YNR023W ATF1P40353 525 aa3.39□□□□□ -1.87
SNF12YNR023W RLP7P40693 322 aaKnown RBP3.39□□□□□ -1.87
SNF12YNR023W ALY2P47029 1046 aa3.39□□□□□ -1.87
SNF12YNR023W PUS2P53167 370 aa3.39□□□□□ -1.87
SNF12YNR023W HDA1P53973 706 aa3.39□□□□□ -1.87
SNF12YNR023W THI73Q07904 523 aa3.39□□□□□ -1.87
SNF12YNR023W GPB1Q08886 897 aa3.39□□□□□ -1.87
SNF12YNR023W NUP145P49687 1317 aa3.38□□□□□ -1.87
SNF12YNR023W DIF1O13577 133 aa3.38□□□□□ -1.87
SNF12YNR023W SPE1P08432 466 aa3.38□□□□□ -1.87
SNF12YNR023W RAD18P10862 487 aa3.38□□□□□ -1.87
SNF12YNR023W SFL1P20134 766 aa3.38□□□□□ -1.87
SNF12YNR023W OAR1P35731 278 aa3.38□□□□□ -1.87
SNF12YNR023W SAP190P36123 1033 aa3.38□□□□□ -1.87
SNF12YNR023W POA1P38218 177 aa3.38□□□□□ -1.87
SNF12YNR023W SET5P38890 526 aaKnown RBP3.38□□□□□ -1.87
SNF12YNR023W HXT16P47185 567 aa3.38□□□□□ -1.87
SNF12YNR023W YGR237CP50089 785 aa3.38□□□□□ -1.87
SNF12YNR023W UME1Q03010 460 aa3.38□□□□□ -1.87
SNF12YNR023W IOC4Q04213 475 aa3.38□□□□□ -1.87
SNF12YNR023W PRC1P00729 532 aa3.37□□□□□ -1.87
SNF12YNR023W YEN1P40028 759 aa3.37□□□□□ -1.87
SNF12YNR023W YIL108WP40483 696 aaKnown RBP3.37□□□□□ -1.87
SNF12YNR023W SHR5P41912 237 aa3.37□□□□□ -1.87
SNF12YNR023W MET12P46151 657 aa3.37□□□□□ -1.87
SNF12YNR023W KIN4Q01919 800 aa3.37□□□□□ -1.87
SNF12YNR023W PLB2Q03674 706 aa3.37□□□□□ -1.87
SNF12YNR023W LRS4Q04087 347 aaKnown RBP3.37□□□□□ -1.87
SNF12YNR023W NHX1Q04121 633 aa3.37□□□□□ -1.87
SNF12YNR023W ADY3Q07732 790 aa3.37□□□□□ -1.87
SNF12YNR023W TPO1Q07824 586 aa3.37□□□□□ -1.87
SNF12YNR023W YBR182C-AQ8TGU6 64 aa3.37□□□□□ -1.87
SNF12YNR023W FBP1P09201 348 aa3.36□□□□□ -1.87
SNF12YNR023W YCL002CP25565 263 aa3.36□□□□□ -1.87
SNF12YNR023W HSL7P38274 827 aa3.36□□□□□ -1.87
SNF12YNR023W PCM1P38628 557 aaKnown RBP3.36□□□□□ -1.87
SNF12YNR023W URM1P40554 99 aaPredicted RBP3.36□□□□□ -1.87
SNF12YNR023W MET13P53128 600 aa3.36□□□□□ -1.87
SNF12YNR023W GUP2Q08929 609 aa3.36□□□□□ -1.87
SNF12YNR023W GIN4Q12263 1142 aa3.36□□□□□ -1.87
SNF12YNR023W PMA1P05030 918 aaKnown RBP3.36□□□□□ -1.87
SNF12YNR023W RPD3P32561 433 aa3.36□□□□□ -1.87
SNF12YNR023W TOM20P35180 183 aa3.36□□□□□ -1.87
SNF12YNR023W DOT6P40059 670 aaKnown RBP3.36□□□□□ -1.87
SNF12YNR023W LGE1Q02796 332 aaKnown RBP3.36□□□□□ -1.87
SNF12YNR023W HFD1Q04458 532 aa3.36□□□□□ -1.87
SNF12YNR023W SSL1Q04673 461 aaPredicted RBP3.36□□□□□ -1.87
SNF12YNR023W ATG33Q06485 197 aa3.36□□□□□ -1.87
SNF12YNR023W GUD1Q07729 489 aa3.36□□□□□ -1.87
SNF12YNR023W THI21Q08975 551 aa3.36□□□□□ -1.87
SNF12YNR023W HIS5P07172 385 aa3.35□□□□□ -1.87
SNF12YNR023W MRC1P25588 1096 aa3.35□□□□□ -1.87
SNF12YNR023W TYS1P36421 394 aaKnown RBP3.35□□□□□ -1.87
SNF12YNR023W PAF1P38351 445 aa3.35□□□□□ -1.87
SNF12YNR023W CTF8P38877 133 aa3.35□□□□□ -1.87
SNF12YNR023W MSS4P38994 779 aa3.35□□□□□ -1.87
SNF12YNR023W SDP1P40479 209 aa3.35□□□□□ -1.87
SNF12YNR023W GTF1P53260 183 aaPredicted RBP3.35□□□□□ -1.87
SNF12YNR023W DUS1P53759 423 aaKnown RBP3.35□□□□□ -1.87
SNF12YNR023W FAP7Q12055 197 aaPredicted RBP3.35□□□□□ -1.87
SNF12YNR023W HAL9Q12180 1030 aa3.35□□□□□ -1.87
SNF12YNR023W YOR022CQ12204 715 aa3.35□□□□□ -1.87
SNF12YNR023W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
SNF12YNR023W SED4P25365 1065 aa3.34□□□□□ -1.87
SNF12YNR023W DEF1P35732 738 aaKnown RBP3.34□□□□□ -1.87
SNF12YNR023W MOH1P38191 138 aa3.34□□□□□ -1.87
SNF12YNR023W CKB2P38930 258 aa3.34□□□□□ -1.87
SNF12YNR023W YFL052WP43551 465 aa3.34□□□□□ -1.87
SNF12YNR023W CHA4P43634 648 aa3.34□□□□□ -1.87
SNF12YNR023W BNA2P47125 453 aa3.34□□□□□ -1.87
SNF12YNR023W ZIP2P53061 704 aa3.34□□□□□ -1.87
SNF12YNR023W NPY1P53164 384 aa3.34□□□□□ -1.87
SNF12YNR023W VPS62P53285 467 aa3.34□□□□□ -1.87
SNF12YNR023W MTQ2Q03920 221 aaPredicted RBP3.34□□□□□ -1.87
SNF12YNR023W NOP12Q08208 459 aaKnown RBP3.34□□□□□ -1.87
SNF12YNR023W HMI1Q12039 706 aa3.34□□□□□ -1.87
SNF12YNR023W HMG1P12683 1054 aa3.33□□□□□ -1.88
SNF12YNR023W YHR078WP38799 552 aa3.33□□□□□ -1.88
SNF12YNR023W AIM14P53109 570 aa3.33□□□□□ -1.88
SNF12YNR023W GPG1P53130 126 aa3.33□□□□□ -1.88
SNF12YNR023W YDR338CQ05497 695 aa3.33□□□□□ -1.88
SNF12YNR023W CRR1Q05790 422 aa3.33□□□□□ -1.88
SNF12YNR023W UPC2Q12151 913 aa3.33□□□□□ -1.88
SNF12YNR023W CDC6P09119 513 aa3.33□□□□□ -1.88
SNF12YNR023W EMC1P25574 760 aa3.33□□□□□ -1.88
SNF12YNR023W CCR4P31384 837 aaKnown RBP3.33□□□□□ -1.88
SNF12YNR023W PRP19P32523 503 aaKnown RBP3.33□□□□□ -1.88
SNF12YNR023W STU2P46675 888 aa3.33□□□□□ -1.88
SNF12YNR023W YJR096WP47137 282 aa3.33□□□□□ -1.88
SNF12YNR023W RPN7Q06103 429 aaKnown RBP3.33□□□□□ -1.88
SNF12YNR023W YTM1Q12024 460 aaPredicted RBP3.33□□□□□ -1.88
SNF12YNR023W MIH1P23748 554 aa3.32□□□□□ -1.88
SNF12YNR023W YKR018CP36114 725 aa3.32□□□□□ -1.88
SNF12YNR023W GPP1P41277 250 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms