RNA–Protein interactions for RNA: YNL272C

SEC2, Transcript of Guanyl-nucleotide exchange factor for the small G-protein Sec4p, yeast

Gene SEC2, Length 2,280 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC2	YNL272C	YDR341C	Q05506	607 aa	Known RBP	4.58	□□□□□ -1.68
SEC2	YNL272C	YLR407W	Q06070	228 aa		4.58	□□□□□ -1.68
SEC2	YNL272C	PSK2	Q08217	1101 aa		4.58	□□□□□ -1.68
SEC2	YNL272C	DSE3	Q08729	430 aa		4.58	□□□□□ -1.68
SEC2	YNL272C	CLF1	Q12309	687 aa	Predicted RBP	4.58	□□□□□ -1.68
SEC2	YNL272C	CIT1	P00890	479 aa		4.58	□□□□□ -1.68
SEC2	YNL272C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	RIP-Chip
SEC2	YNL272C	BMH2	P34730	273 aa	Known RBP	4.58	□□□□□ -1.68
SEC2	YNL272C	APE3	P37302	537 aa	Known RBP	4.58	□□□□□ -1.68
SEC2	YNL272C	PES4	P39684	611 aa		4.58	□□□□□ -1.68
SEC2	YNL272C	VAB2	P40003	282 aa		4.58	□□□□□ -1.68
SEC2	YNL272C	PCI8	P40512	444 aa		4.58	□□□□□ -1.68
SEC2	YNL272C	FAA4	P47912	694 aa	Known RBP	4.58	□□□□□ -1.68
SEC2	YNL272C	SOL4	P53315	255 aa		4.58	□□□□□ -1.68
SEC2	YNL272C	ALD6	P54115	500 aa	Known RBP	4.58	□□□□□ -1.68
SEC2	YNL272C	ROD1	Q02805	837 aa		4.58	□□□□□ -1.68
SEC2	YNL272C	YMR187C	Q03236	431 aa		4.58	□□□□□ -1.68
SEC2	YNL272C	UBX5	Q06682	500 aa		4.58	□□□□□ -1.68
SEC2	YNL272C	CPA2	P03965	1118 aa	Known RBP	4.57	□□□□□ -1.68
SEC2	YNL272C	DED1	P06634	604 aa	Known RBP	4.57	□□□□□ -1.68
SEC2	YNL272C	RAD18	P10862	487 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	BIK1	P11709	440 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	VPS1	P21576	704 aa	Known RBP	4.57	□□□□□ -1.68
SEC2	YNL272C	SFA1	P32771	386 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	RFC5	P38251	354 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	RXT2	P38255	430 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	NDT80	P38830	627 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	MAD1	P40957	749 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	NET1	P47035	1189 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	ASE1	P50275	885 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	LSB1	P53281	241 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	MCA1	Q08601	432 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	RTT10	Q08924	1013 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	YPR053C	Q6Q5F3	151 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	CDC6	P09119	513 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	SAM1	P10659	382 aa	Known RBP	4.57	□□□□□ -1.68
SEC2	YNL272C	PRX1	P34227	261 aa	Known RBP	4.57	□□□□□ -1.68
SEC2	YNL272C	ARL1	P38116	183 aa	Known RBP	4.57	□□□□□ -1.68
SEC2	YNL272C	PHO88	P38264	188 aa	Predicted RBP	4.57	□□□□□ -1.68
SEC2	YNL272C	TOM71	P38825	639 aa	Known RBP	4.57	□□□□□ -1.68
SEC2	YNL272C	SKN7	P38889	622 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	VAC8	P39968	578 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	DUS1	P53759	423 aa	Known RBP	4.57	□□□□□ -1.68
SEC2	YNL272C	SIW14	P53965	281 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	EEB1	Q02891	456 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	YOR223W	Q12015	292 aa		4.57	□□□□□ -1.68
SEC2	YNL272C	CFT2	Q12102	859 aa	Predicted RBP	4.57	□□□□□ -1.68
SEC2	YNL272C	RPL8A	P17076	256 aa	Known RBP	4.56	□□□□□ -1.68
SEC2	YNL272C	PER1	P25625	357 aa		4.56	□□□□□ -1.68
SEC2	YNL272C	TPM2	P40414	161 aa		4.56	□□□□□ -1.68
SEC2	YNL272C	FMS1	P50264	508 aa		4.56	□□□□□ -1.68
SEC2	YNL272C	PEX14	P53112	341 aa		4.56	□□□□□ -1.68
SEC2	YNL272C	YGR045C	P53229	120 aa		4.56	□□□□□ -1.68
SEC2	YNL272C	GDE1	Q02979	1223 aa		4.56	□□□□□ -1.68
SEC2	YNL272C	SMD2	Q06217	110 aa	Known RBP	4.56	□□□□□ -1.68
SEC2	YNL272C	VIP1	Q06685	1146 aa	Known RBP	4.56	□□□□□ -1.68
SEC2	YNL272C	GSC2	P40989	1895 aa		4.56	□□□□□ -1.68
SEC2	YNL272C	VMA2	P16140	517 aa	Known RBP	4.56	□□□□□ -1.68
SEC2	YNL272C	CBP3	P21560	335 aa		4.56	□□□□□ -1.68
SEC2	YNL272C	PWP2	P25635	923 aa	Known RBP	4.56	□□□□□ -1.68
SEC2	YNL272C	MOT2	P34909	587 aa	Known RBP	4.56	□□□□□ -1.68
SEC2	YNL272C	DJP1	P40564	432 aa		4.56	□□□□□ -1.68
SEC2	YNL272C	PIL1	P53252	339 aa	Known RBP	4.56	□□□□□ -1.68
SEC2	YNL272C	YNR063W	P53749	607 aa		4.56	□□□□□ -1.68
SEC2	YNL272C	DOT1	Q04089	582 aa	Known RBP	4.56	□□□□□ -1.68
SEC2	YNL272C	TMA64	Q04600	565 aa	Known RBP	4.56	□□□□□ -1.68
SEC2	YNL272C	HRQ1	Q05549	1077 aa		4.56	□□□□□ -1.68
SEC2	YNL272C	YPL150W	Q12152	901 aa		4.56	□□□□□ -1.68
SEC2	YNL272C	RKM4	Q12504	494 aa		4.56	□□□□□ -1.68
SEC2	YNL272C	TAF13	P11747	167 aa		4.55	□□□□□ -1.68
SEC2	YNL272C	CLN2	P20438	545 aa		4.55	□□□□□ -1.68
SEC2	YNL272C	MKK2	P32491	506 aa		4.55	□□□□□ -1.68
SEC2	YNL272C	SHP1	P34223	423 aa		4.55	□□□□□ -1.68
SEC2	YNL272C	ADD66	P36040	267 aa		4.55	□□□□□ -1.68
SEC2	YNL272C	VPS24	P36095	224 aa	Known RBP	4.55	□□□□□ -1.68
SEC2	YNL272C	GPT2	P36148	743 aa		4.55	□□□□□ -1.68
SEC2	YNL272C	MAL33	P38157	468 aa		4.55	□□□□□ -1.68
SEC2	YNL272C	ERG7	P38604	731 aa		4.55	□□□□□ -1.68
SEC2	YNL272C	YGR053C	P53234	283 aa		4.55	□□□□□ -1.68
SEC2	YNL272C	ELA1	P53861	379 aa	Predicted RBP	4.55	□□□□□ -1.68
SEC2	YNL272C	RDS1	P25611	832 aa		4.55	□□□□□ -1.68
SEC2	YNL272C	CDC60	P26637	1090 aa	Known RBP	4.55	□□□□□ -1.68
SEC2	YNL272C	UTR4	P32626	227 aa		4.55	□□□□□ -1.68
SEC2	YNL272C	CCT3	P39077	534 aa	Known RBP	4.55	□□□□□ -1.68
SEC2	YNL272C	ARI1	P53111	347 aa	Known RBP	4.55	□□□□□ -1.68
SEC2	YNL272C	YGL138C	P53122	345 aa		4.55	□□□□□ -1.68
SEC2	YNL272C	SGD1	Q06132	899 aa		4.55	□□□□□ -1.68
SEC2	YNL272C	DCS2	Q12123	353 aa		4.55	□□□□□ -1.68
SEC2	YNL272C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
SEC2	YNL272C	IME2	P32581	645 aa		4.54	□□□□□ -1.68
SEC2	YNL272C	TGL1	P34163	548 aa		4.54	□□□□□ -1.68
SEC2	YNL272C	YAR028W	P39548	234 aa		4.54	□□□□□ -1.68
SEC2	YNL272C	BNI5	P53890	448 aa	Known RBP	4.54	□□□□□ -1.68
SEC2	YNL272C	EIS1	Q05050	843 aa	Known RBP	4.54	□□□□□ -1.68
SEC2	YNL272C	GET3	Q12154	354 aa	Known RBP	4.54	□□□□□ -1.68
SEC2	YNL272C	LSP1	Q12230	341 aa	Known RBP	4.54	□□□□□ -1.68
SEC2	YNL272C	YLL054C	Q12244	843 aa		4.54	□□□□□ -1.68
SEC2	YNL272C	CEX1	Q12453	761 aa		4.54	□□□□□ -1.68
SEC2	YNL272C	MBR1	P23493	339 aa		4.53	□□□□□ -1.68
SEC2	YNL272C	NAM7	P30771	971 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms