RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C ACE2P21192 770 aa4.04□□□□□ -1.76
VPS9YML097C CCR4P31384 837 aaKnown RBP4.04□□□□□ -1.76
VPS9YML097C AIM26P32858 118 aa4.04□□□□□ -1.76
VPS9YML097C MRS6P32864 603 aaKnown RBP4.04□□□□□ -1.76
VPS9YML097C DID4P36108 232 aa4.04□□□□□ -1.76
VPS9YML097C SAF1P38352 637 aa4.04□□□□□ -1.76
VPS9YML097C RIM4P38741 713 aa4.04□□□□□ -1.76
VPS9YML097C UBP5P39944 805 aa4.04□□□□□ -1.76
VPS9YML097C HXT16P47185 567 aa4.04□□□□□ -1.76
VPS9YML097C YKE2P52553 114 aa4.04□□□□□ -1.76
VPS9YML097C ECM9Q02202 377 aa4.04□□□□□ -1.76
VPS9YML097C XYL2Q07993 356 aa4.04□□□□□ -1.76
VPS9YML097C YOR022CQ12204 715 aa4.04□□□□□ -1.76
VPS9YML097C YVC1Q12324 675 aa4.04□□□□□ -1.76
VPS9YML097C Q0142Q9ZZW4 58 aa4.04□□□□□ -1.76
VPS9YML097C RPS21AP0C0V8 87 aaKnown RBP4.03□□□□□ -1.76
VPS9YML097C COX11P19516 300 aaKnown RBP4.03□□□□□ -1.76
VPS9YML097C MIH1P23748 554 aa4.03□□□□□ -1.76
VPS9YML097C KCC4P25389 1037 aa4.03□□□□□ -1.76
VPS9YML097C PTP2P29461 750 aa4.03□□□□□ -1.76
VPS9YML097C RPD3P32561 433 aa4.03□□□□□ -1.76
VPS9YML097C SRP101P32916 621 aa4.03□□□□□ -1.76
VPS9YML097C YKL133CP36066 463 aa4.03□□□□□ -1.76
VPS9YML097C YKR051WP36142 418 aa4.03□□□□□ -1.76
VPS9YML097C SET5P38890 526 aaKnown RBP4.03□□□□□ -1.76
VPS9YML097C RRT14P40470 206 aa4.03□□□□□ -1.76
VPS9YML097C MMM1P41800 426 aa4.03□□□□□ -1.76
VPS9YML097C BFA1P47113 574 aa4.03□□□□□ -1.76
VPS9YML097C VPS30Q02948 557 aa4.03□□□□□ -1.76
VPS9YML097C ECM38Q05902 660 aaPredicted RBP4.03□□□□□ -1.76
VPS9YML097C RPN7Q06103 429 aaKnown RBP4.03□□□□□ -1.76
VPS9YML097C SAM35P14693 329 aa4.02□□□□□ -1.77
VPS9YML097C PFK1P16861 987 aaKnown RBP4.02□□□□□ -1.77
VPS9YML097C RPA135P22138 1203 aaKnown RBP4.02□□□□□ -1.77
VPS9YML097C APL1P27351 700 aa4.02□□□□□ -1.77
VPS9YML097C ELM1P32801 640 aa4.02□□□□□ -1.77
VPS9YML097C MDL2P33311 773 aa4.02□□□□□ -1.77
VPS9YML097C ECM21P38167 1117 aaKnown RBP4.02□□□□□ -1.77
VPS9YML097C SLD3P53135 668 aa4.02□□□□□ -1.77
VPS9YML097C PBP1P53297 722 aaKnown RBP4.02□□□□□ -1.77
VPS9YML097C PTA1Q01329 785 aaPredicted RBP4.02□□□□□ -1.77
VPS9YML097C MLC2Q06580 163 aa4.02□□□□□ -1.77
VPS9YML097C RSC58Q07979 502 aa4.02□□□□□ -1.77
VPS9YML097C RPS21BQ3E754 87 aaKnown RBP4.02□□□□□ -1.77
VPS9YML097C YBR182C-AQ8TGU6 64 aa4.02□□□□□ -1.77
VPS9YML097C APA1P16550 321 aaKnown RBP4.02□□□□□ -1.77
VPS9YML097C SRO9P25567 434 aaKnown RBP4.02□□□□□ -1.77
VPS9YML097C HEM12P32347 362 aaPredicted RBP4.02□□□□□ -1.77
VPS9YML097C YKU70P32807 602 aa4.02□□□□□ -1.77
VPS9YML097C SER1P33330 395 aaKnown RBP4.02□□□□□ -1.77
VPS9YML097C TRZ1P36159 838 aaPredicted RBP4.02□□□□□ -1.77
VPS9YML097C YAP1801P38856 637 aa4.02□□□□□ -1.77
VPS9YML097C ERP2P39704 215 aa4.02□□□□□ -1.77
VPS9YML097C IES5P40060 125 aa4.02□□□□□ -1.77
VPS9YML097C CCT5P40413 562 aaKnown RBP4.02□□□□□ -1.77
VPS9YML097C HIS6P40545 261 aa4.02□□□□□ -1.77
VPS9YML097C GTS1P40956 396 aa4.02□□□□□ -1.77
VPS9YML097C HDA1P53973 706 aa4.02□□□□□ -1.77
VPS9YML097C SKY1Q03656 742 aa4.02□□□□□ -1.77
VPS9YML097C NKP1Q12493 238 aa4.02□□□□□ -1.77
VPS9YML097C TYE7P33122 291 aaPredicted RBP4.01□□□□□ -1.77
VPS9YML097C STE13P33894 931 aa4.01□□□□□ -1.77
VPS9YML097C KTR4P38131 464 aa4.01□□□□□ -1.77
VPS9YML097C POA1P38218 177 aa4.01□□□□□ -1.77
VPS9YML097C RFC5P38251 354 aa4.01□□□□□ -1.77
VPS9YML097C YIL108WP40483 696 aaKnown RBP4.01□□□□□ -1.77
VPS9YML097C RSC8P43609 557 aaKnown RBP4.01□□□□□ -1.77
VPS9YML097C CIT3P43635 486 aa4.01□□□□□ -1.77
VPS9YML097C RAI1P53063 387 aaKnown RBP4.01□□□□□ -1.77
VPS9YML097C RCM1P53972 490 aa4.01□□□□□ -1.77
VPS9YML097C YKR011CQ02209 353 aa4.01□□□□□ -1.77
VPS9YML097C TMA64Q04600 565 aaKnown RBP4.01□□□□□ -1.77
VPS9YML097C YOR059CQ08448 450 aaKnown RBP4.01□□□□□ -1.77
VPS9YML097C YPL277CQ08989 487 aa4.01□□□□□ -1.77
VPS9YML097C HAL9Q12180 1030 aa4.01□□□□□ -1.77
VPS9YML097C SPS1P08458 490 aa4□□□□□ -1.77
VPS9YML097C SEC65P29478 273 aa4□□□□□ -1.77
VPS9YML097C RPC82P32349 654 aa4□□□□□ -1.77
VPS9YML097C PTH2P34222 208 aa4□□□□□ -1.77
VPS9YML097C MNN4P36044 1178 aa4□□□□□ -1.77
VPS9YML097C PTC7P38797 343 aa4□□□□□ -1.77
VPS9YML097C HXT6P39003 570 aaKnown RBP4□□□□□ -1.77
VPS9YML097C HXT7P39004 570 aa4□□□□□ -1.77
VPS9YML097C EMP65P40085 556 aa4□□□□□ -1.77
VPS9YML097C VID27P40157 782 aa4□□□□□ -1.77
VPS9YML097C BNA2P47125 453 aa4□□□□□ -1.77
VPS9YML097C RNR4P49723 345 aaKnown RBP4□□□□□ -1.77
VPS9YML097C PUF3Q07807 879 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
VPS9YML097C PEX15Q08215 383 aa4□□□□□ -1.77
VPS9YML097C RRP6Q12149 733 aaKnown RBP4□□□□□ -1.77
VPS9YML097C OAF3P36023 863 aa3.99□□□□□ -1.77
VPS9YML097C YKR075CP36155 307 aa3.99□□□□□ -1.77
VPS9YML097C FLR1P38124 548 aa3.99□□□□□ -1.77
VPS9YML097C FAT1P38225 669 aa3.99□□□□□ -1.77
VPS9YML097C YHL041WP38730 149 aa3.99□□□□□ -1.77
VPS9YML097C ENV11P53246 860 aa3.99□□□□□ -1.77
VPS9YML097C SSL1Q04673 461 aaPredicted RBP3.99□□□□□ -1.77
VPS9YML097C TRE1Q08919 783 aa3.99□□□□□ -1.77
VPS9YML097C YLR149CQ99296 730 aa3.99□□□□□ -1.77
VPS9YML097C KIN2P13186 1147 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms