RNA–Protein interactions for RNA: YLR447C

VMA6, Transcript of Subunit d of the V0 integral membrane domain of V-ATPase, yeast

Gene VMA6, Length 1,038 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA6	YLR447C	HSP60	P19882	572 aa	Known RBP	5.21	□□□□□ -1.58
VMA6	YLR447C	SAK1	P38990	1142 aa		5.21	□□□□□ -1.58
VMA6	YLR447C	YJL163C	P46996	555 aa		5.21	□□□□□ -1.58
VMA6	YLR447C	RIA1	P53893	1110 aa		5.21	□□□□□ -1.58
VMA6	YLR447C	RSC3	Q06639	885 aa		5.21	□□□□□ -1.58
VMA6	YLR447C	YOR022C	Q12204	715 aa		5.21	□□□□□ -1.58
VMA6	YLR447C	PRP4	P20053	465 aa	Known RBP	5.2	□□□□□ -1.58
VMA6	YLR447C	YIR042C	P40586	236 aa		5.2	□□□□□ -1.58
VMA6	YLR447C	HUL4	P40985	892 aa		5.2	□□□□□ -1.58
VMA6	YLR447C	DAM1	P53267	343 aa		5.2	□□□□□ -1.58
VMA6	YLR447C	MRPS35	P53292	345 aa		5.2	□□□□□ -1.58
VMA6	YLR447C	MUS81	Q04149	632 aa	Predicted RBP	5.2	□□□□□ -1.58
VMA6	YLR447C	YDL124W	Q07551	312 aa	Known RBP	5.2	□□□□□ -1.58
VMA6	YLR447C	YLR415C	O13578	112 aa		5.19	□□□□□ -1.58
VMA6	YLR447C	YBR053C	P38235	358 aa		5.19	□□□□□ -1.58
VMA6	YLR447C	TAD1	P53065	400 aa		5.19	□□□□□ -1.58
VMA6	YLR447C	HCA4	P20448	770 aa	Known RBP	5.18	□□□□□ -1.58
VMA6	YLR447C	PCL5	P38794	229 aa		5.18	□□□□□ -1.58
VMA6	YLR447C	UBP6	P43593	499 aa	Known RBP	5.18	□□□□□ -1.58
VMA6	YLR447C	HSV2	P50079	448 aa	Predicted RBP	5.18	□□□□□ -1.58
VMA6	YLR447C	YGR125W	P53273	1036 aa		5.18	□□□□□ -1.58
VMA6	YLR447C	TOM70	P07213	617 aa	Known RBP	5.17	□□□□□ -1.58
VMA6	YLR447C	TOP3	P13099	656 aa		5.17	□□□□□ -1.58
VMA6	YLR447C	RAD4	P14736	754 aa		5.17	□□□□□ -1.58
VMA6	YLR447C	EMC3	P36039	253 aa		5.17	□□□□□ -1.58
VMA6	YLR447C	PAM1	P37304	830 aa	Known RBP	5.17	□□□□□ -1.58
VMA6	YLR447C	YDR514C	Q04408	483 aa		5.17	□□□□□ -1.58
VMA6	YLR447C	REH1	Q06709	432 aa		5.17	□□□□□ -1.58
VMA6	YLR447C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
VMA6	YLR447C	NDJ1	Q12366	352 aa		5.17	□□□□□ -1.58
VMA6	YLR447C	CIT1	P00890	479 aa		5.16	□□□□□ -1.58
VMA6	YLR447C	LAT1	P12695	482 aa	Known RBP	5.16	□□□□□ -1.58
VMA6	YLR447C	KIN3	P22209	435 aa		5.16	□□□□□ -1.58
VMA6	YLR447C	HIS7	P33734	552 aa	Known RBP	5.16	□□□□□ -1.58
VMA6	YLR447C	TDP1	P38319	544 aa		5.16	□□□□□ -1.58
VMA6	YLR447C	PFA3	P42836	336 aa		5.16	□□□□□ -1.58
VMA6	YLR447C	CBR1	P38626	284 aa	Known RBP	5.15	□□□□□ -1.59
VMA6	YLR447C	SET5	P38890	526 aa	Known RBP	5.15	□□□□□ -1.59
VMA6	YLR447C	SHR5	P41912	237 aa		5.15	□□□□□ -1.59
VMA6	YLR447C	TIM54	P47045	478 aa		5.15	□□□□□ -1.59
VMA6	YLR447C	MTR3	P48240	250 aa	Predicted RBP	5.15	□□□□□ -1.59
VMA6	YLR447C	SSL2	Q00578	843 aa		5.15	□□□□□ -1.59
VMA6	YLR447C	LRS4	Q04087	347 aa	Known RBP	5.15	□□□□□ -1.59
VMA6	YLR447C	SGO1	Q08490	590 aa		5.15	□□□□□ -1.59
VMA6	YLR447C	IRC13	Q08630	104 aa		5.15	□□□□□ -1.59
VMA6	YLR447C	YCL002C	P25565	263 aa		5.14	□□□□□ -1.59
VMA6	YLR447C	PPZ2	P33329	710 aa		5.14	□□□□□ -1.59
VMA6	YLR447C	ZDS1	P50111	915 aa	Known RBP	5.14	□□□□□ -1.59
VMA6	YLR447C	YGR283C	P53336	341 aa	Predicted RBP	5.14	□□□□□ -1.59
VMA6	YLR447C	YBR259W	P38338	688 aa		5.13	□□□□□ -1.59
VMA6	YLR447C	VPS73	P53142	486 aa	Known RBP	5.13	□□□□□ -1.59
VMA6	YLR447C	ATG11	Q12527	1178 aa		5.13	□□□□□ -1.59
VMA6	YLR447C	PEX2	P32800	271 aa		5.12	□□□□□ -1.59
VMA6	YLR447C	FMP52	P40008	231 aa		5.12	□□□□□ -1.59
VMA6	YLR447C	GYP8	P43570	497 aa		5.12	□□□□□ -1.59
VMA6	YLR447C	ALG2	P43636	503 aa		5.12	□□□□□ -1.59
VMA6	YLR447C	TAF8	Q03750	510 aa		5.12	□□□□□ -1.59
VMA6	YLR447C	THI21	Q08975	551 aa		5.12	□□□□□ -1.59
VMA6	YLR447C	TGL5	Q12043	749 aa		5.12	□□□□□ -1.59
VMA6	YLR447C	DMC1	P25453	334 aa		5.11	□□□□□ -1.59
VMA6	YLR447C	ILV6	P25605	309 aa	Known RBP	5.11	□□□□□ -1.59
VMA6	YLR447C	SIC1	P38634	284 aa		5.11	□□□□□ -1.59
VMA6	YLR447C	GGA2	P38817	585 aa	Known RBP	5.11	□□□□□ -1.59
VMA6	YLR447C	REV7	P38927	245 aa		5.11	□□□□□ -1.59
VMA6	YLR447C	YBP2	P53169	641 aa		5.11	□□□□□ -1.59
VMA6	YLR447C	DIF1	O13577	133 aa		5.1	□□□□□ -1.59
VMA6	YLR447C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
VMA6	YLR447C	BCD1	P38772	366 aa		5.1	□□□□□ -1.59
VMA6	YLR447C	YIL166C	P40445	542 aa		5.1	□□□□□ -1.59
VMA6	YLR447C	SNM1	P40993	198 aa		5.1	□□□□□ -1.59
VMA6	YLR447C	YJL049W	P47048	450 aa		5.1	□□□□□ -1.59
VMA6	YLR447C	TAH11	P47112	604 aa		5.1	□□□□□ -1.59
VMA6	YLR447C	TEL2	P53038	688 aa		5.1	□□□□□ -1.59
VMA6	YLR447C	YAP1802	P53309	568 aa		5.1	□□□□□ -1.59
VMA6	YLR447C	GAD1	Q04792	585 aa		5.1	□□□□□ -1.59
VMA6	YLR447C	FLC1	Q08967	793 aa		5.1	□□□□□ -1.59
VMA6	YLR447C	MET6	P05694	767 aa	Known RBP	5.09	□□□□□ -1.59
VMA6	YLR447C	TUB1	P09733	447 aa	Known RBP	5.09	□□□□□ -1.59
VMA6	YLR447C	RLP7	P40693	322 aa	Known RBP	5.09	□□□□□ -1.59
VMA6	YLR447C	MET7	Q08645	548 aa		5.09	□□□□□ -1.59
VMA6	YLR447C	SUT2	Q12286	268 aa		5.09	□□□□□ -1.59
VMA6	YLR447C	YBR182C-A	Q8TGU6	64 aa		5.09	□□□□□ -1.59
VMA6	YLR447C	RIX1	P38883	763 aa	Predicted RBP	5.08	□□□□□ -1.6
VMA6	YLR447C	HOS4	P40480	1083 aa		5.08	□□□□□ -1.6
VMA6	YLR447C	UBC11	P52492	156 aa		5.08	□□□□□ -1.6
VMA6	YLR447C	ZIP2	P53061	704 aa		5.08	□□□□□ -1.6
VMA6	YLR447C	ATP25	Q03153	612 aa		5.08	□□□□□ -1.6
VMA6	YLR447C	NOP7	P53261	605 aa	Known RBP	5.07	□□□□□ -1.6
VMA6	YLR447C	ASM4	Q05166	528 aa		5.07	□□□□□ -1.6
VMA6	YLR447C	BNR1	P40450	1375 aa		5.06	□□□□□ -1.6
VMA6	YLR447C	YJL206C	P39529	758 aa		5.06	□□□□□ -1.6
VMA6	YLR447C	SMX3	P54999	86 aa	Predicted RBP	5.06	□□□□□ -1.6
VMA6	YLR447C	BET3	P36149	193 aa		5.05	□□□□□ -1.6
VMA6	YLR447C	YHR020W	P38708	688 aa	Known RBP	5.05	□□□□□ -1.6
VMA6	YLR447C	ECM1	P39715	212 aa		5.05	□□□□□ -1.6
VMA6	YLR447C	BAP3	P41815	604 aa		5.05	□□□□□ -1.6
VMA6	YLR447C	ALY2	P47029	1046 aa		5.05	□□□□□ -1.6
VMA6	YLR447C	IMO32	P53219	342 aa		5.05	□□□□□ -1.6
VMA6	YLR447C	CTK1	Q03957	528 aa	Known RBP	5.05	□□□□□ -1.6
VMA6	YLR447C	COQ11	Q05892	277 aa		5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms