RNA–Protein interactions for RNA: YLL046C

RNP1, Transcript of Ribonucleoprotein that contains two RNA recognition motifs (RRM), yeast

Gene RNP1, Length 750 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNP1	YLL046C	BUL2	Q03758	920 aa	Known RBP	3.91	□□□□□ -1.78
RNP1	YLL046C	MUS81	Q04149	632 aa	Predicted RBP	3.91	□□□□□ -1.78
RNP1	YLL046C	LAT1	P12695	482 aa	Known RBP	3.9	□□□□□ -1.79
RNP1	YLL046C	NGG1	P32494	702 aa		3.9	□□□□□ -1.79
RNP1	YLL046C	YKL069W	P36088	180 aa		3.9	□□□□□ -1.79
RNP1	YLL046C	BCD1	P38772	366 aa		3.9	□□□□□ -1.79
RNP1	YLL046C	PZF1	P39933	429 aa		3.9	□□□□□ -1.79
RNP1	YLL046C	CCT7	P42943	550 aa	Known RBP	3.9	□□□□□ -1.79
RNP1	YLL046C	HAL9	Q12180	1030 aa		3.9	□□□□□ -1.79
RNP1	YLL046C	TAF3	Q12297	353 aa		3.9	□□□□□ -1.79
RNP1	YLL046C	YLR415C	O13578	112 aa		3.89	□□□□□ -1.79
RNP1	YLL046C	ASF1	P32447	279 aa		3.89	□□□□□ -1.79
RNP1	YLL046C	SAK1	P38990	1142 aa		3.89	□□□□□ -1.79
RNP1	YLL046C	HOS4	P40480	1083 aa		3.89	□□□□□ -1.79
RNP1	YLL046C	DUS1	P53759	423 aa	Known RBP	3.89	□□□□□ -1.79
RNP1	YLL046C	CWC24	P53769	259 aa		3.89	□□□□□ -1.79
RNP1	YLL046C	LCD1	Q04377	747 aa		3.89	□□□□□ -1.79
RNP1	YLL046C	OPI10	Q08202	246 aa		3.89	□□□□□ -1.79
RNP1	YLL046C	PRI2	P20457	528 aa		3.88	□□□□□ -1.79
RNP1	YLL046C	REC104	P33323	182 aa		3.88	□□□□□ -1.79
RNP1	YLL046C	YEL020C	P39994	560 aa		3.88	□□□□□ -1.79
RNP1	YLL046C	TPO2	P53283	614 aa		3.88	□□□□□ -1.79
RNP1	YLL046C	RIM13	Q03792	727 aa		3.88	□□□□□ -1.79
RNP1	YLL046C	TGL5	Q12043	749 aa		3.88	□□□□□ -1.79
RNP1	YLL046C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
RNP1	YLL046C	UBC11	P52492	156 aa		3.87	□□□□□ -1.79
RNP1	YLL046C	CYS3	P31373	394 aa	Known RBP	3.86	□□□□□ -1.79
RNP1	YLL046C	PFA3	P42836	336 aa		3.86	□□□□□ -1.79
RNP1	YLL046C	SSY5	P47002	699 aa		3.86	□□□□□ -1.79
RNP1	YLL046C	RGT2	Q12300	763 aa		3.86	□□□□□ -1.79
RNP1	YLL046C	HOM2	P13663	365 aa	Known RBP	3.85	□□□□□ -1.79
RNP1	YLL046C	HIR1	P32479	840 aa		3.85	□□□□□ -1.79
RNP1	YLL046C	HBS1	P32769	611 aa	Known RBP	3.85	□□□□□ -1.79
RNP1	YLL046C	PBY1	P38254	753 aa		3.85	□□□□□ -1.79
RNP1	YLL046C	NDC80	P40460	691 aa		3.85	□□□□□ -1.79
RNP1	YLL046C	BPL1	P48445	690 aa	Predicted RBP	3.85	□□□□□ -1.79
RNP1	YLL046C	SEG1	Q04279	960 aa		3.85	□□□□□ -1.79
RNP1	YLL046C	YOR022C	Q12204	715 aa		3.85	□□□□□ -1.79
RNP1	YLL046C	RPN13	O13563	156 aa		3.84	□□□□□ -1.79
RNP1	YLL046C	PTP1	P25044	335 aa		3.84	□□□□□ -1.79
RNP1	YLL046C	MRP8	P35719	219 aa		3.84	□□□□□ -1.79
RNP1	YLL046C	YML020W	Q03722	664 aa		3.84	□□□□□ -1.79
RNP1	YLL046C	YPR071W	Q12346	211 aa		3.84	□□□□□ -1.79
RNP1	YLL046C	UBS1	P38290	277 aa		3.83	□□□□□ -1.8
RNP1	YLL046C	YAP1802	P53309	568 aa		3.83	□□□□□ -1.8
RNP1	YLL046C	MPS1	P54199	764 aa		3.83	□□□□□ -1.8
RNP1	YLL046C	VPS34	P22543	875 aa		3.82	□□□□□ -1.8
RNP1	YLL046C	YBR284W	P38150	797 aa		3.82	□□□□□ -1.8
RNP1	YLL046C	OSW1	Q08692	278 aa		3.82	□□□□□ -1.8
RNP1	YLL046C	ENV7	Q12003	364 aa		3.82	□□□□□ -1.8
RNP1	YLL046C	GLG1	P36143	616 aa		3.81	□□□□□ -1.8
RNP1	YLL046C	REV7	P38927	245 aa		3.81	□□□□□ -1.8
RNP1	YLL046C	IRR1	P40541	1150 aa		3.81	□□□□□ -1.8
RNP1	YLL046C	MAD1	P40957	749 aa		3.81	□□□□□ -1.8
RNP1	YLL046C	CTR1	P49573	406 aa		3.81	□□□□□ -1.8
RNP1	YLL046C	TDA9	Q04545	1251 aa		3.81	□□□□□ -1.8
RNP1	YLL046C	PRC1	P00729	532 aa		3.8	□□□□□ -1.8
RNP1	YLL046C	DAL7	P21826	554 aa		3.8	□□□□□ -1.8
RNP1	YLL046C	STE5	P32917	917 aa		3.8	□□□□□ -1.8
RNP1	YLL046C	SIC1	P38634	284 aa		3.8	□□□□□ -1.8
RNP1	YLL046C	BAP3	P41815	604 aa		3.8	□□□□□ -1.8
RNP1	YLL046C	BNA3	P47039	444 aa	Known RBP	3.8	□□□□□ -1.8
RNP1	YLL046C	NOG2	P53742	486 aa	Known RBP	3.8	□□□□□ -1.8
RNP1	YLL046C	RSC3	Q06639	885 aa		3.8	□□□□□ -1.8
RNP1	YLL046C	PIN2	Q12057	282 aa		3.8	□□□□□ -1.8
RNP1	YLL046C	ATG11	Q12527	1178 aa		3.8	□□□□□ -1.8
RNP1	YLL046C	SIR3	P06701	978 aa		3.79	□□□□□ -1.8
RNP1	YLL046C	BDH2	P39713	417 aa		3.79	□□□□□ -1.8
RNP1	YLL046C	PAC2	P39937	518 aa		3.79	□□□□□ -1.8
RNP1	YLL046C	ARG2	P40360	574 aa		3.79	□□□□□ -1.8
RNP1	YLL046C	NET1	P47035	1189 aa		3.79	□□□□□ -1.8
RNP1	YLL046C	UBC9	P50623	157 aa	Predicted RBP	3.79	□□□□□ -1.8
RNP1	YLL046C	PYC1	P11154	1178 aa	Known RBP	3.78	□□□□□ -1.8
RNP1	YLL046C	PRP9	P19736	530 aa	Known RBP	3.78	□□□□□ -1.8
RNP1	YLL046C	YCL002C	P25565	263 aa		3.78	□□□□□ -1.8
RNP1	YLL046C	TEX1	P53851	422 aa	Known RBP	3.78	□□□□□ -1.8
RNP1	YLL046C	LRS4	Q04087	347 aa	Known RBP	3.78	□□□□□ -1.8
RNP1	YLL046C	GPR1	Q12361	961 aa		3.78	□□□□□ -1.8
RNP1	YLL046C	YKL033W-A	Q86ZR7	236 aa		3.78	□□□□□ -1.8
RNP1	YLL046C	AIM44	Q99299	758 aa		3.78	□□□□□ -1.8
RNP1	YLL046C	TOP3	P13099	656 aa		3.77	□□□□□ -1.81
RNP1	YLL046C	SFB3	P38810	929 aa		3.77	□□□□□ -1.81
RNP1	YLL046C	PAN2	P53010	1115 aa	Predicted RBP	3.77	□□□□□ -1.81
RNP1	YLL046C	TAD1	P53065	400 aa		3.77	□□□□□ -1.81
RNP1	YLL046C	GAD1	Q04792	585 aa		3.77	□□□□□ -1.81
RNP1	YLL046C	ERG11	P10614	530 aa		3.76	□□□□□ -1.81
RNP1	YLL046C	CDC11	P32458	415 aa		3.76	□□□□□ -1.81
RNP1	YLL046C	SAP190	P36123	1033 aa		3.76	□□□□□ -1.81
RNP1	YLL046C	YBR184W	P38299	523 aa		3.76	□□□□□ -1.81
RNP1	YLL046C	YBR259W	P38338	688 aa		3.76	□□□□□ -1.81
RNP1	YLL046C	ALR2	P43553	858 aa		3.76	□□□□□ -1.81
RNP1	YLL046C	PFD1	P46988	109 aa		3.76	□□□□□ -1.81
RNP1	YLL046C	NIT3	P49954	291 aa		3.76	□□□□□ -1.81
RNP1	YLL046C	NOP8	Q08287	484 aa	Predicted RBP	3.76	□□□□□ -1.81
RNP1	YLL046C	MSD1	P15179	658 aa	Known RBP	3.75	□□□□□ -1.81
RNP1	YLL046C	NOP1	P15646	327 aa	Known RBP	3.75	□□□□□ -1.81
RNP1	YLL046C	SPC29	P33419	253 aa		3.75	□□□□□ -1.81
RNP1	YLL046C	CCT3	P39077	534 aa	Known RBP	3.75	□□□□□ -1.81
RNP1	YLL046C	LTP1	P40347	161 aa		3.75	□□□□□ -1.81
RNP1	YLL046C	XBP1	P40489	647 aa		3.75	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms