RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C ATG17Q06410 417 aa5.16□□□□□ -1.58
CAF4YKR036C TSR2Q06672 205 aaKnown RBP5.16□□□□□ -1.58
CAF4YKR036C UTP4Q06679 776 aaKnown RBP5.16□□□□□ -1.58
CAF4YKR036C CSR1Q06705 408 aaKnown RBP5.16□□□□□ -1.58
CAF4YKR036C OPY2Q06810 360 aa5.16□□□□□ -1.58
CAF4YKR036C AI2P03876 854 aa5.15□□□□□ -1.58
CAF4YKR036C GFA1P14742 717 aaKnown RBP5.15□□□□□ -1.58
CAF4YKR036C PWP1P21304 576 aaKnown RBP5.15□□□□□ -1.58
CAF4YKR036C DIT2P21595 489 aa5.15□□□□□ -1.58
CAF4YKR036C PDC6P26263 563 aaKnown RBP5.15□□□□□ -1.58
CAF4YKR036C APL1P27351 700 aa5.15□□□□□ -1.58
CAF4YKR036C KIP1P28742 1111 aa5.15□□□□□ -1.58
CAF4YKR036C BMH1P29311 267 aaKnown RBP5.15□□□□□ -1.58
CAF4YKR036C ASF1P32447 279 aa5.15□□□□□ -1.58
CAF4YKR036C SLA2P33338 968 aa5.15□□□□□ -1.58
CAF4YKR036C MCD4P36051 919 aa5.15□□□□□ -1.58
CAF4YKR036C BCD1P38772 366 aa5.15□□□□□ -1.58
CAF4YKR036C VAB2P40003 282 aa5.15□□□□□ -1.58
CAF4YKR036C SIP5P40210 489 aaKnown RBP5.15□□□□□ -1.58
CAF4YKR036C LYS14P40971 790 aa5.15□□□□□ -1.58
CAF4YKR036C ATG1P53104 897 aa5.15□□□□□ -1.58
CAF4YKR036C YMR114CQ04471 368 aaKnown RBP5.15□□□□□ -1.58
CAF4YKR036C MGR3Q04472 501 aa5.15□□□□□ -1.58
CAF4YKR036C TY3A-GQ12173 290 aa5.15□□□□□ -1.58
CAF4YKR036C CLF1Q12309 687 aaPredicted RBP5.15□□□□□ -1.58
CAF4YKR036C TY3A-IQ99219 290 aa5.15□□□□□ -1.58
CAF4YKR036C CYB2P00175 591 aa5.15□□□□□ -1.59
CAF4YKR036C FBP1P09201 348 aa5.15□□□□□ -1.59
CAF4YKR036C THR1P17423 357 aaKnown RBP5.15□□□□□ -1.59
CAF4YKR036C CBP3P21560 335 aa5.15□□□□□ -1.59
CAF4YKR036C VPS1P21576 704 aaKnown RBP5.15□□□□□ -1.59
CAF4YKR036C VMA4P22203 233 aaKnown RBP5.15□□□□□ -1.59
CAF4YKR036C ADY2P25613 283 aa5.15□□□□□ -1.59
CAF4YKR036C OXP1P28273 1286 aa5.15□□□□□ -1.59
CAF4YKR036C YKL091CP33324 310 aaKnown RBP5.15□□□□□ -1.59
CAF4YKR036C UTP11P34247 250 aaPredicted RBP5.15□□□□□ -1.59
CAF4YKR036C BOI1P38041 980 aaKnown RBP5.15□□□□□ -1.59
CAF4YKR036C TBS1P38114 1094 aa5.15□□□□□ -1.59
CAF4YKR036C HSM3P38348 480 aa5.15□□□□□ -1.59
CAF4YKR036C BRL1P38770 471 aa5.15□□□□□ -1.59
CAF4YKR036C EPS1P40557 701 aa5.15□□□□□ -1.59
CAF4YKR036C YAP5P40574 245 aa5.15□□□□□ -1.59
CAF4YKR036C URB2P47108 1174 aa5.15□□□□□ -1.59
CAF4YKR036C PIP2P52960 996 aa5.15□□□□□ -1.59
CAF4YKR036C COS6P53344 381 aa5.15□□□□□ -1.59
CAF4YKR036C SPO71Q03868 1245 aa5.15□□□□□ -1.59
CAF4YKR036C SIL1Q08199 421 aa5.15□□□□□ -1.59
CAF4YKR036C DNL4Q08387 944 aaPredicted RBP5.15□□□□□ -1.59
CAF4YKR036C KIN1P13185 1064 aa5.14□□□□□ -1.59
CAF4YKR036C MSB1P21339 1137 aaKnown RBP5.14□□□□□ -1.59
CAF4YKR036C YDJ1P25491 409 aaKnown RBP5.14□□□□□ -1.59
CAF4YKR036C BUD23P25627 275 aaPredicted RBP5.14□□□□□ -1.59
CAF4YKR036C RAM2P29703 316 aa5.14□□□□□ -1.59
CAF4YKR036C ITR2P30606 609 aa5.14□□□□□ -1.59
CAF4YKR036C MRE11P32829 692 aa5.14□□□□□ -1.59
CAF4YKR036C ATG14P38270 344 aa5.14□□□□□ -1.59
CAF4YKR036C SMX2P40204 77 aaKnown RBP5.14□□□□□ -1.59
CAF4YKR036C AIM21P40563 679 aa5.14□□□□□ -1.59
CAF4YKR036C AIP1P46680 615 aaKnown RBP5.14□□□□□ -1.59
CAF4YKR036C HOP2P53187 214 aa5.14□□□□□ -1.59
CAF4YKR036C NSG2P53898 299 aa5.14□□□□□ -1.59
CAF4YKR036C FAR11P53917 953 aa5.14□□□□□ -1.59
CAF4YKR036C ECI1Q05871 280 aa5.14□□□□□ -1.59
CAF4YKR036C VIK1Q12045 647 aa5.14□□□□□ -1.59
CAF4YKR036C GET4Q12125 312 aa5.14□□□□□ -1.59
CAF4YKR036C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
CAF4YKR036C HTZ1Q12692 134 aaKnown RBP5.14□□□□□ -1.59
CAF4YKR036C TUS1Q06412 1307 aa5.14□□□□□ -1.59
CAF4YKR036C TUB2P02557 457 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C SRV2P17555 526 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C HCA4P20448 770 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C FAR1P21268 830 aa5.13□□□□□ -1.59
CAF4YKR036C DPB2P24482 689 aaPredicted RBP5.13□□□□□ -1.59
CAF4YKR036C ILV6P25605 309 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C IMP2'P32351 346 aa5.13□□□□□ -1.59
CAF4YKR036C SSE1P32589 693 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C AST1P35183 429 aa5.13□□□□□ -1.59
CAF4YKR036C FES1P38260 290 aa5.13□□□□□ -1.59
CAF4YKR036C SET5P38890 526 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C YEL023CP39992 682 aa5.13□□□□□ -1.59
CAF4YKR036C IRR1P40541 1150 aa5.13□□□□□ -1.59
CAF4YKR036C IES1P43579 692 aa5.13□□□□□ -1.59
CAF4YKR036C YGR054WP53235 642 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C LSC2P53312 427 aa5.13□□□□□ -1.59
CAF4YKR036C SDA1P53313 767 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C NOP15P53927 220 aaPredicted RBP5.13□□□□□ -1.59
CAF4YKR036C SHE9Q04172 456 aa5.13□□□□□ -1.59
CAF4YKR036C DAS2Q12084 232 aa5.13□□□□□ -1.59
CAF4YKR036C MST1P07236 462 aa5.13□□□□□ -1.59
CAF4YKR036C SUP45P12385 437 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C PRP9P19736 530 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C OPI1P21957 404 aa5.13□□□□□ -1.59
CAF4YKR036C MCM3P24279 971 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C SEC20P28791 383 aa5.13□□□□□ -1.59
CAF4YKR036C NAM7P30771 971 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C GDA1P32621 518 aa5.13□□□□□ -1.59
CAF4YKR036C UBC6P33296 250 aaPredicted RBP5.13□□□□□ -1.59
CAF4YKR036C GRX7P38068 203 aa5.13□□□□□ -1.59
CAF4YKR036C RPN10P38886 268 aaKnown RBP5.13□□□□□ -1.59
CAF4YKR036C SAK1P38990 1142 aa5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms