RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W TDA3P38758 523 aa2.38□□□□□ -2.03
RTT107YHR154W BFA1P47113 574 aa2.38□□□□□ -2.03
RTT107YHR154W TGL2P54857 326 aa2.38□□□□□ -2.03
RTT107YHR154W RAT1Q02792 1006 aaKnown RBP2.38□□□□□ -2.03
RTT107YHR154W YHM2Q04013 314 aa2.38□□□□□ -2.03
RTT107YHR154W REH1Q06709 432 aa2.38□□□□□ -2.03
RTT107YHR154W DIB1Q06819 143 aaPredicted RBP2.38□□□□□ -2.03
RTT107YHR154W SYT1Q06836 1226 aa2.38□□□□□ -2.03
RTT107YHR154W MCA1Q08601 432 aa2.38□□□□□ -2.03
RTT107YHR154W RKM4Q12504 494 aa2.38□□□□□ -2.03
RTT107YHR154W YOL087CQ99247 1116 aa2.38□□□□□ -2.03
RTT107YHR154W YLL067CQ07888 1374 aa2.38□□□□□ -2.03
RTT107YHR154W FBP1P09201 348 aa2.38□□□□□ -2.03
RTT107YHR154W RPS24AP0CX31 135 aaKnown RBP2.38□□□□□ -2.03
RTT107YHR154W RPS24BP0CX32 135 aaKnown RBP2.38□□□□□ -2.03
RTT107YHR154W ICL1P28240 557 aaPredicted RBP2.38□□□□□ -2.03
RTT107YHR154W MKK2P32491 506 aa2.38□□□□□ -2.03
RTT107YHR154W PEX5P35056 612 aa2.38□□□□□ -2.03
RTT107YHR154W MCX1P38323 520 aaPredicted RBP2.38□□□□□ -2.03
RTT107YHR154W HOS4P40480 1083 aa2.38□□□□□ -2.03
RTT107YHR154W UBP6P43593 499 aaKnown RBP2.38□□□□□ -2.03
RTT107YHR154W VTC4P47075 721 aa2.38□□□□□ -2.03
RTT107YHR154W RRT6P53117 311 aaPredicted RBP2.38□□□□□ -2.03
RTT107YHR154W SIW14P53965 281 aa2.38□□□□□ -2.03
RTT107YHR154W YPQ2Q06328 317 aa2.38□□□□□ -2.03
RTT107YHR154W PSK2Q08217 1101 aa2.38□□□□□ -2.03
RTT107YHR154W SSP2Q08646 371 aa2.38□□□□□ -2.03
RTT107YHR154W YTM1Q12024 460 aaPredicted RBP2.38□□□□□ -2.03
RTT107YHR154W YDR056CQ12025 205 aa2.38□□□□□ -2.03
RTT107YHR154W RRP6Q12149 733 aaKnown RBP2.38□□□□□ -2.03
RTT107YHR154W SRD1P09007 221 aa2.38□□□□□ -2.03
RTT107YHR154W YER152CP10356 443 aa2.38□□□□□ -2.03
RTT107YHR154W HOM3P10869 527 aa2.38□□□□□ -2.03
RTT107YHR154W IDI1P15496 288 aa2.38□□□□□ -2.03
RTT107YHR154W DIT1P21623 536 aa2.38□□□□□ -2.03
RTT107YHR154W DUR3P33413 735 aa2.38□□□□□ -2.03
RTT107YHR154W TAT1P38085 619 aa2.38□□□□□ -2.03
RTT107YHR154W PPE1P38796 400 aa2.38□□□□□ -2.03
RTT107YHR154W CKB2P38930 258 aa2.38□□□□□ -2.03
RTT107YHR154W OAF1P39720 1047 aaPredicted RBP2.38□□□□□ -2.03
RTT107YHR154W BNA2P47125 453 aa2.38□□□□□ -2.03
RTT107YHR154W EMG1Q06287 252 aaKnown RBP2.38□□□□□ -2.03
RTT107YHR154W VIP1Q06685 1146 aaKnown RBP2.38□□□□□ -2.03
RTT107YHR154W YOR296WQ08748 1289 aa2.38□□□□□ -2.03
RTT107YHR154W YPR027CQ12079 277 aa2.38□□□□□ -2.03
RTT107YHR154W CYB2P00175 591 aa2.37□□□□□ -2.03
RTT107YHR154W ADE8P04161 214 aa2.37□□□□□ -2.03
RTT107YHR154W NFS1P25374 497 aa2.37□□□□□ -2.03
RTT107YHR154W MLS1P30952 554 aa2.37□□□□□ -2.03
RTT107YHR154W SCT1P32784 759 aa2.37□□□□□ -2.03
RTT107YHR154W APE3P37302 537 aaKnown RBP2.37□□□□□ -2.03
RTT107YHR154W YHL041WP38730 149 aa2.37□□□□□ -2.03
RTT107YHR154W SLN1P39928 1220 aaPredicted RBP2.37□□□□□ -2.03
RTT107YHR154W FET4P40988 552 aa2.37□□□□□ -2.03
RTT107YHR154W ERR3P42222 437 aa2.37□□□□□ -2.03
RTT107YHR154W LSB6P42951 607 aa2.37□□□□□ -2.03
RTT107YHR154W ATP22P50273 684 aaPredicted RBP2.37□□□□□ -2.03
RTT107YHR154W PPT1P53043 513 aa2.37□□□□□ -2.03
RTT107YHR154W MAL11P53048 616 aa2.37□□□□□ -2.03
RTT107YHR154W BLS1Q06071 122 aa2.37□□□□□ -2.03
RTT107YHR154W HKR1P41809 1802 aa2.37□□□□□ -2.03
RTT107YHR154W COX11P19516 300 aaKnown RBP2.37□□□□□ -2.03
RTT107YHR154W YCK2P23292 546 aaKnown RBP2.37□□□□□ -2.03
RTT107YHR154W PGS1P25578 521 aa2.37□□□□□ -2.03
RTT107YHR154W NAB2P32505 525 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03 RIP-Chip
RTT107YHR154W MUM2P38236 366 aa2.37□□□□□ -2.03
RTT107YHR154W SRB7P47822 140 aa2.37□□□□□ -2.03
RTT107YHR154W SLD3P53135 668 aa2.37□□□□□ -2.03
RTT107YHR154W PBP1P53297 722 aaKnown RBP2.37□□□□□ -2.03
RTT107YHR154W UTP4Q06679 776 aaKnown RBP2.37□□□□□ -2.03
RTT107YHR154W YLR001CQ07895 862 aa2.37□□□□□ -2.03
RTT107YHR154W RRI2Q12348 645 aa2.37□□□□□ -2.03
RTT107YHR154W CSR2Q12734 1121 aa2.37□□□□□ -2.03
RTT107YHR154W MDM12Q92328 271 aa2.37□□□□□ -2.03
RTT107YHR154W YMR084WA2P2R3 262 aa2.36□□□□□ -2.03
RTT107YHR154W CDC31P06704 161 aaKnown RBP2.36□□□□□ -2.03
RTT107YHR154W SLC1P33333 303 aa2.36□□□□□ -2.03
RTT107YHR154W STO1P34160 861 aaKnown RBP2.36□□□□□ -2.03
RTT107YHR154W WHI3P34761 661 aaKnown RBP2.36□□□□□ -2.03
RTT107YHR154W PAP2P53632 584 aaKnown RBP2.36□□□□□ -2.03
RTT107YHR154W CTR9P89105 1077 aa2.36□□□□□ -2.03
RTT107YHR154W ECM38Q05902 660 aaPredicted RBP2.36□□□□□ -2.03
RTT107YHR154W IRC3Q06683 689 aa2.36□□□□□ -2.03
RTT107YHR154W SPO21Q12411 609 aa2.36□□□□□ -2.03
RTT107YHR154W HSH49Q99181 213 aaPredicted RBP2.36□□□□□ -2.03
RTT107YHR154W OSM1P21375 501 aaKnown RBP2.36□□□□□ -2.03
RTT107YHR154W RER1P25560 188 aa2.36□□□□□ -2.03
RTT107YHR154W IRE1P32361 1115 aa2.36□□□□□ -2.03
RTT107YHR154W VPH1P32563 840 aaKnown RBP2.36□□□□□ -2.03
RTT107YHR154W VMA8P32610 256 aaKnown RBP2.36□□□□□ -2.03
RTT107YHR154W SAP190P36123 1033 aa2.36□□□□□ -2.03
RTT107YHR154W PET10P36139 283 aa2.36□□□□□ -2.03
RTT107YHR154W RPN10P38886 268 aaKnown RBP2.36□□□□□ -2.03
RTT107YHR154W YEL068CP39977 110 aa2.36□□□□□ -2.03
RTT107YHR154W RPS0BP46654 252 aaKnown RBP2.36□□□□□ -2.03
RTT107YHR154W RRG1Q12167 365 aaPredicted RBP2.36□□□□□ -2.03
RTT107YHR154W YDR215CQ12240 137 aa2.36□□□□□ -2.03
RTT107YHR154W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03 RIP-Chip
RTT107YHR154W NPP1P25353 742 aa2.36□□□□□ -2.03
RTT107YHR154W RRN3P36070 627 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms