RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W MSD1P15179 658 aaKnown RBP4.46□□□□□ -1.7
RPF1YHR088W PRP4P20053 465 aaKnown RBP4.46□□□□□ -1.7
RPF1YHR088W HCA4P20448 770 aaKnown RBP4.46□□□□□ -1.7
RPF1YHR088W EMC3P36039 253 aa4.46□□□□□ -1.7
RPF1YHR088W YBR284WP38150 797 aa4.46□□□□□ -1.7
RPF1YHR088W HSV2P50079 448 aaPredicted RBP4.46□□□□□ -1.7
RPF1YHR088W NRG1Q03125 231 aa4.46□□□□□ -1.7
RPF1YHR088W REH1Q06709 432 aa4.46□□□□□ -1.7
RPF1YHR088W HAL9Q12180 1030 aa4.46□□□□□ -1.7
RPF1YHR088W MUS81Q04149 632 aaPredicted RBP4.45□□□□□ -1.7
RPF1YHR088W SGO1Q08490 590 aa4.45□□□□□ -1.7
RPF1YHR088W HSP60P19882 572 aaKnown RBP4.44□□□□□ -1.7
RPF1YHR088W ARE1P25628 610 aa4.44□□□□□ -1.7
RPF1YHR088W UBP6P43593 499 aaKnown RBP4.44□□□□□ -1.7
RPF1YHR088W SSY5P47002 699 aa4.44□□□□□ -1.7
RPF1YHR088W MRPS35P53292 345 aa4.44□□□□□ -1.7
RPF1YHR088W RSC3Q06639 885 aa4.44□□□□□ -1.7
RPF1YHR088W PRC1P00729 532 aa4.43□□□□□ -1.7
RPF1YHR088W DAL7P21826 554 aa4.43□□□□□ -1.7
RPF1YHR088W SIC1P38634 284 aa4.43□□□□□ -1.7
RPF1YHR088W FMP52P40008 231 aa4.43□□□□□ -1.7
RPF1YHR088W SNM1P40993 198 aa4.43□□□□□ -1.7
RPF1YHR088W YJL049WP47048 450 aa4.43□□□□□ -1.7
RPF1YHR088W LGE1Q02796 332 aaKnown RBP4.43□□□□□ -1.7
RPF1YHR088W UBX5Q06682 500 aa4.43□□□□□ -1.7
RPF1YHR088W YDL124WQ07551 312 aaKnown RBP4.43□□□□□ -1.7
RPF1YHR088W THI21Q08975 551 aa4.43□□□□□ -1.7
RPF1YHR088W DMC1P25453 334 aa4.42□□□□□ -1.7
RPF1YHR088W PAM1P37304 830 aaKnown RBP4.42□□□□□ -1.7
RPF1YHR088W YBR259WP38338 688 aa4.42□□□□□ -1.7
RPF1YHR088W PCL5P38794 229 aa4.42□□□□□ -1.7
RPF1YHR088W SAK1P38990 1142 aa4.42□□□□□ -1.7
RPF1YHR088W ECM1P39715 212 aa4.42□□□□□ -1.7
RPF1YHR088W YIL166CP40445 542 aa4.42□□□□□ -1.7
RPF1YHR088W HUL4P40985 892 aa4.42□□□□□ -1.7
RPF1YHR088W YAP1802P53309 568 aa4.42□□□□□ -1.7
RPF1YHR088W YGR283CP53336 341 aaPredicted RBP4.42□□□□□ -1.7
RPF1YHR088W SSL2Q00578 843 aa4.42□□□□□ -1.7
RPF1YHR088W COQ11Q05892 277 aa4.42□□□□□ -1.7
RPF1YHR088W YOR022CQ12204 715 aa4.42□□□□□ -1.7
RPF1YHR088W KIN3P22209 435 aa4.41□□□□□ -1.7
RPF1YHR088W SAP190P36123 1033 aa4.41□□□□□ -1.7
RPF1YHR088W SET5P38890 526 aaKnown RBP4.41□□□□□ -1.7
RPF1YHR088W PFA3P42836 336 aa4.41□□□□□ -1.7
RPF1YHR088W ZDS1P50111 915 aaKnown RBP4.41□□□□□ -1.7
RPF1YHR088W TAD1P53065 400 aa4.41□□□□□ -1.7
RPF1YHR088W VPS73P53142 486 aaKnown RBP4.41□□□□□ -1.7
RPF1YHR088W YDR514CQ04408 483 aa4.41□□□□□ -1.7
RPF1YHR088W CIT1P00890 479 aa4.4□□□□□ -1.71
RPF1YHR088W TOP3P13099 656 aa4.4□□□□□ -1.71
RPF1YHR088W TDP1P38319 544 aa4.4□□□□□ -1.71
RPF1YHR088W TAH11P47112 604 aa4.4□□□□□ -1.71
RPF1YHR088W TEL2P53038 688 aa4.4□□□□□ -1.71
RPF1YHR088W TUB1P09733 447 aaKnown RBP4.39□□□□□ -1.71
RPF1YHR088W GGA2P38817 585 aaKnown RBP4.39□□□□□ -1.71
RPF1YHR088W BAP3P41815 604 aa4.39□□□□□ -1.71
RPF1YHR088W ATP25Q03153 612 aa4.39□□□□□ -1.71
RPF1YHR088W TAF8Q03750 510 aa4.39□□□□□ -1.71
RPF1YHR088W IRC13Q08630 104 aa4.39□□□□□ -1.71
RPF1YHR088W TGL5Q12043 749 aa4.39□□□□□ -1.71
RPF1YHR088W RAD4P14736 754 aa4.38□□□□□ -1.71
RPF1YHR088W PPZ2P33329 710 aa4.38□□□□□ -1.71
RPF1YHR088W REV7P38927 245 aa4.38□□□□□ -1.71
RPF1YHR088W HOS4P40480 1083 aa4.38□□□□□ -1.71
RPF1YHR088W ALG2P43636 503 aa4.38□□□□□ -1.71
RPF1YHR088W MTR3P48240 250 aaPredicted RBP4.38□□□□□ -1.71
RPF1YHR088W UBC11P52492 156 aa4.38□□□□□ -1.71
RPF1YHR088W IMO32P53219 342 aa4.38□□□□□ -1.71
RPF1YHR088W LRS4Q04087 347 aaKnown RBP4.38□□□□□ -1.71
RPF1YHR088W SUT2Q12286 268 aa4.38□□□□□ -1.71
RPF1YHR088W YNL162W-AQ3E7A8 72 aa4.38□□□□□ -1.71
RPF1YHR088W TOM70P07213 617 aaKnown RBP4.37□□□□□ -1.71
RPF1YHR088W HIS7P33734 552 aaKnown RBP4.37□□□□□ -1.71
RPF1YHR088W BCD1P38772 366 aa4.37□□□□□ -1.71
RPF1YHR088W GYP8P43570 497 aa4.37□□□□□ -1.71
RPF1YHR088W YGR125WP53273 1036 aa4.37□□□□□ -1.71
RPF1YHR088W SMX3P54999 86 aaPredicted RBP4.37□□□□□ -1.71
RPF1YHR088W GAD1Q04792 585 aa4.37□□□□□ -1.71
RPF1YHR088W MET6P05694 767 aaKnown RBP4.36□□□□□ -1.71
RPF1YHR088W CBR1P38626 284 aaKnown RBP4.36□□□□□ -1.71
RPF1YHR088W RIX1P38883 763 aaPredicted RBP4.36□□□□□ -1.71
RPF1YHR088W RLP7P40693 322 aaKnown RBP4.36□□□□□ -1.71
RPF1YHR088W SHR5P41912 237 aa4.36□□□□□ -1.71
RPF1YHR088W ZIP2P53061 704 aa4.36□□□□□ -1.71
RPF1YHR088W YBP2P53169 641 aa4.36□□□□□ -1.71
RPF1YHR088W GPR1Q12361 961 aa4.36□□□□□ -1.71
RPF1YHR088W YBR182C-AQ8TGU6 64 aa4.36□□□□□ -1.71
RPF1YHR088W RPN13O13563 156 aa4.35□□□□□ -1.71
RPF1YHR088W DIF1O13577 133 aa4.35□□□□□ -1.71
RPF1YHR088W SIR3P06701 978 aa4.35□□□□□ -1.71
RPF1YHR088W YCL002CP25565 263 aa4.35□□□□□ -1.71
RPF1YHR088W TIM54P47045 478 aa4.35□□□□□ -1.71
RPF1YHR088W APM1Q00776 475 aaPredicted RBP4.35□□□□□ -1.71
RPF1YHR088W HOF1Q05080 669 aa4.35□□□□□ -1.71
RPF1YHR088W ARO10Q06408 635 aa4.35□□□□□ -1.71
RPF1YHR088W TAF3Q12297 353 aa4.35□□□□□ -1.71
RPF1YHR088W CCT3P39077 534 aaKnown RBP4.34□□□□□ -1.71
RPF1YHR088W MET7Q08645 548 aa4.34□□□□□ -1.71
RPF1YHR088W FLC1Q08967 793 aa4.34□□□□□ -1.71
RPF1YHR088W BNR1P40450 1375 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms