RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C CHS6P40955 746 aa9.07□□□□□ -0.96
SOD2YHR008C JIP5Q06214 492 aaPredicted RBP9.07□□□□□ -0.96
SOD2YHR008C CTF3Q12748 733 aa9.07□□□□□ -0.96
SOD2YHR008C ASF1P32447 279 aa9.06□□□□□ -0.96
SOD2YHR008C CSE1P33307 960 aa9.06□□□□□ -0.96
SOD2YHR008C TRM2P33753 639 aa9.06□□□□□ -0.96
SOD2YHR008C CDC27P38042 758 aa9.06□□□□□ -0.96
SOD2YHR008C EPL1P43572 832 aa9.06□□□□□ -0.96
SOD2YHR008C IES1P43579 692 aa9.06□□□□□ -0.96
SOD2YHR008C UBP10P53874 792 aaPredicted RBP9.06□□□□□ -0.96
SOD2YHR008C ARK1P53974 638 aa9.06□□□□□ -0.96
SOD2YHR008C FLC1Q08967 793 aa9.06□□□□□ -0.96
SOD2YHR008C PPH22P23595 377 aa9.05□□□□□ -0.96
SOD2YHR008C PRS1P32895 427 aaKnown RBP9.05□□□□□ -0.96
SOD2YHR008C SLA2P33338 968 aa9.05□□□□□ -0.96
SOD2YHR008C RPN10P38886 268 aaKnown RBP9.05□□□□□ -0.96
SOD2YHR008C BTT1P40314 149 aaPredicted RBP9.05□□□□□ -0.96
SOD2YHR008C UTP8P53276 713 aaKnown RBP9.05□□□□□ -0.96
SOD2YHR008C VTC3Q02725 835 aa9.05□□□□□ -0.96
SOD2YHR008C YPQ1Q12010 308 aa9.05□□□□□ -0.96
SOD2YHR008C NAM7P30771 971 aaKnown RBP9.04□□□□□ -0.96
SOD2YHR008C BRN1P38170 754 aa9.04□□□□□ -0.96
SOD2YHR008C GIP4P39732 760 aa9.04□□□□□ -0.96
SOD2YHR008C VTC2P43585 828 aa9.04□□□□□ -0.96
SOD2YHR008C BSP1Q06604 576 aa9.04□□□□□ -0.96
SOD2YHR008C SHS1Q07657 551 aa9.04□□□□□ -0.96
SOD2YHR008C TIP41Q12199 356 aa9.04□□□□□ -0.96
SOD2YHR008C MATALPHA2P0CY08 210 aa9.03□□□□□ -0.96
SOD2YHR008C HMLALPHA2P0CY09 210 aa9.03□□□□□ -0.96
SOD2YHR008C RPL4AP10664 362 aaKnown RBP9.03□□□□□ -0.96
SOD2YHR008C RAD16P31244 790 aa9.03□□□□□ -0.96
SOD2YHR008C TSA1P34760 196 aaKnown RBP9.03□□□□□ -0.96
SOD2YHR008C TCD2P36101 447 aaKnown RBP9.03□□□□□ -0.96
SOD2YHR008C PGM2P37012 569 aaKnown RBP9.03□□□□□ -0.96
SOD2YHR008C GIP1P38229 639 aa9.03□□□□□ -0.96
SOD2YHR008C RPL4BP49626 362 aaKnown RBP9.03□□□□□ -0.96
SOD2YHR008C NMA2P53204 395 aa9.03□□□□□ -0.96
SOD2YHR008C TIF35Q04067 274 aaKnown RBP9.03□□□□□ -0.96
SOD2YHR008C HRT3Q12347 344 aa9.03□□□□□ -0.96
SOD2YHR008C GCN1P33892 2672 aaKnown RBP9.03□□□□□ -0.96
SOD2YHR008C CDC6P09119 513 aa9.02□□□□□ -0.97
SOD2YHR008C CBP3P21560 335 aa9.02□□□□□ -0.97
SOD2YHR008C SIP3P38717 1229 aa9.02□□□□□ -0.97
SOD2YHR008C YHR054CP38780 354 aa9.02□□□□□ -0.97
SOD2YHR008C GGA2P38817 585 aaKnown RBP9.02□□□□□ -0.97
SOD2YHR008C RAD55P38953 406 aa9.02□□□□□ -0.97
SOD2YHR008C DOT6P40059 670 aaKnown RBP9.02□□□□□ -0.97
SOD2YHR008C TGL3P40308 642 aa9.02□□□□□ -0.97
SOD2YHR008C NUP82P40368 713 aa9.02□□□□□ -0.97
SOD2YHR008C SCD6P45978 349 aaKnown RBP RIP-Chip data9.02□□□□□ -0.97not detected
SOD2YHR008C ORC5P50874 479 aa9.02□□□□□ -0.97
SOD2YHR008C NOP13P53883 403 aaKnown RBP RIP-Chip data9.02□□□□□ -0.97not detected
SOD2YHR008C KRE33P53914 1056 aaKnown RBP9.02□□□□□ -0.97
SOD2YHR008C HER2Q03557 464 aa9.02□□□□□ -0.97
SOD2YHR008C YDL057WQ07379 328 aa9.02□□□□□ -0.97
SOD2YHR008C YDL129WQ07555 291 aa9.02□□□□□ -0.97
SOD2YHR008C TPK1P06244 397 aa9.01□□□□□ -0.97
SOD2YHR008C FRS2P15625 503 aaKnown RBP9.01□□□□□ -0.97
SOD2YHR008C FPR1P20081 114 aaKnown RBP9.01□□□□□ -0.97
SOD2YHR008C VPS1P21576 704 aaKnown RBP9.01□□□□□ -0.97
SOD2YHR008C YSC83P32792 385 aa9.01□□□□□ -0.97
SOD2YHR008C PIH1P38768 344 aa9.01□□□□□ -0.97
SOD2YHR008C AIM9P40053 627 aaKnown RBP9.01□□□□□ -0.97
SOD2YHR008C RMD8P43620 662 aa9.01□□□□□ -0.97
SOD2YHR008C ENT3P47160 408 aa9.01□□□□□ -0.97
SOD2YHR008C YKE2P52553 114 aa9.01□□□□□ -0.97
SOD2YHR008C HXT17P53631 564 aa9.01□□□□□ -0.97
SOD2YHR008C CBK1P53894 756 aa9.01□□□□□ -0.97
SOD2YHR008C YAT1P80235 687 aa9.01□□□□□ -0.97
SOD2YHR008C SNU56Q03782 492 aaKnown RBP9.01□□□□□ -0.97
SOD2YHR008C SSD1P24276 1250 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
SOD2YHR008C GAC1P28006 793 aa9□□□□□ -0.97
SOD2YHR008C MET4P32389 672 aa9□□□□□ -0.97
SOD2YHR008C MNN4P36044 1178 aa9□□□□□ -0.97
SOD2YHR008C YKR051WP36142 418 aa9□□□□□ -0.97
SOD2YHR008C SIF2P38262 535 aa9□□□□□ -0.97
SOD2YHR008C SDA1P53313 767 aaKnown RBP9□□□□□ -0.97
SOD2YHR008C GCR2Q01722 534 aa9□□□□□ -0.97
SOD2YHR008C HPF1Q05164 967 aa9□□□□□ -0.97
SOD2YHR008C TAF10Q12030 206 aa9□□□□□ -0.97
SOD2YHR008C LAA1P39526 2014 aa9□□□□□ -0.97
SOD2YHR008C BI4P03879 638 aa8.99□□□□□ -0.97
SOD2YHR008C SSB1P11484 613 aaKnown RBP8.99□□□□□ -0.97
SOD2YHR008C TAF13P11747 167 aa8.99□□□□□ -0.97
SOD2YHR008C SWE1P32944 819 aa8.99□□□□□ -0.97
SOD2YHR008C PTC3P34221 468 aaKnown RBP8.99□□□□□ -0.97
SOD2YHR008C TIF5P38431 405 aaKnown RBP8.99□□□□□ -0.97
SOD2YHR008C SSB2P40150 613 aaKnown RBP8.99□□□□□ -0.97
SOD2YHR008C YGR153WP48238 217 aa8.99□□□□□ -0.97
SOD2YHR008C CUR1Q06469 252 aa8.99□□□□□ -0.97
SOD2YHR008C YDL206WQ12424 762 aa8.99□□□□□ -0.97
SOD2YHR008C TUF1P02992 437 aaKnown RBP8.98□□□□□ -0.97
SOD2YHR008C YEL076C-AP0CX16 216 aa8.98□□□□□ -0.97
SOD2YHR008C YLR464WP0CX17 216 aa8.98□□□□□ -0.97
SOD2YHR008C HSF1P10961 833 aa8.98□□□□□ -0.97
SOD2YHR008C CKA2P19454 339 aa8.98□□□□□ -0.97
SOD2YHR008C PDC6P26263 563 aaKnown RBP8.98□□□□□ -0.97
SOD2YHR008C TFB1P32776 642 aa8.98□□□□□ -0.97
SOD2YHR008C YEL076CP39971 216 aa8.98□□□□□ -0.97
SOD2YHR008C ASN1P49089 572 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms