RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C UBX2Q04228 584 aa5.15□□□□□ -1.59
SEC9YGR009C KRE28Q04431 385 aa5.15□□□□□ -1.59
SEC9YGR009C ATG20Q07528 640 aa5.15□□□□□ -1.59
SEC9YGR009C TLG2Q08144 397 aa5.15□□□□□ -1.59
SEC9YGR009C IOC2Q12072 812 aa5.15□□□□□ -1.59
SEC9YGR009C RRG1Q12167 365 aaPredicted RBP5.15□□□□□ -1.59
SEC9YGR009C YOR019WQ99248 730 aa5.15□□□□□ -1.59
SEC9YGR009C CET1O13297 549 aaPredicted RBP5.14□□□□□ -1.59
SEC9YGR009C ADE2P21264 571 aaKnown RBP5.14□□□□□ -1.59
SEC9YGR009C SPB1P25582 841 aaPredicted RBP5.14□□□□□ -1.59
SEC9YGR009C GUT2P32191 649 aa5.14□□□□□ -1.59
SEC9YGR009C CBF2P32504 956 aa5.14□□□□□ -1.59
SEC9YGR009C HCS1P34243 683 aa5.14□□□□□ -1.59
SEC9YGR009C MIF2P35201 549 aa5.14□□□□□ -1.59
SEC9YGR009C YPT52P36018 234 aaKnown RBP5.14□□□□□ -1.59
SEC9YGR009C YKL133CP36066 463 aa5.14□□□□□ -1.59
SEC9YGR009C POL12P38121 705 aaPredicted RBP5.14□□□□□ -1.59
SEC9YGR009C YBL036CP38197 257 aa5.14□□□□□ -1.59
SEC9YGR009C YBR071WP38243 211 aa5.14□□□□□ -1.59
SEC9YGR009C UTP9P38882 575 aaKnown RBP5.14□□□□□ -1.59
SEC9YGR009C BUD16P39988 312 aa5.14□□□□□ -1.59
SEC9YGR009C REF2P42073 533 aaPredicted RBP5.14□□□□□ -1.59
SEC9YGR009C CNN1P43618 361 aa5.14□□□□□ -1.59
SEC9YGR009C VPS53P47061 822 aa5.14□□□□□ -1.59
SEC9YGR009C ZIP2P53061 704 aa5.14□□□□□ -1.59
SEC9YGR009C GUP1P53154 560 aa5.14□□□□□ -1.59
SEC9YGR009C CAF130P53280 1122 aaPredicted RBP5.14□□□□□ -1.59
SEC9YGR009C RSC4Q02206 625 aa5.14□□□□□ -1.59
SEC9YGR009C RMD1Q03441 430 aa5.14□□□□□ -1.59
SEC9YGR009C YML108WQ03759 105 aa5.14□□□□□ -1.59
SEC9YGR009C PML39Q03760 334 aa5.14□□□□□ -1.59
SEC9YGR009C RBA50Q04418 439 aa5.14□□□□□ -1.59
SEC9YGR009C UFO1Q04511 668 aa5.14□□□□□ -1.59
SEC9YGR009C SPR28Q04921 423 aa5.14□□□□□ -1.59
SEC9YGR009C SEC10Q06245 871 aa5.14□□□□□ -1.59
SEC9YGR009C BRE4Q07660 1125 aa5.14□□□□□ -1.59
SEC9YGR009C BUD7Q08754 746 aa5.14□□□□□ -1.59
SEC9YGR009C HSH49Q99181 213 aaPredicted RBP5.14□□□□□ -1.59
SEC9YGR009C BIK1P11709 440 aa5.13□□□□□ -1.59
SEC9YGR009C FUS1P11710 512 aa5.13□□□□□ -1.59
SEC9YGR009C SFL1P20134 766 aa5.13□□□□□ -1.59
SEC9YGR009C PRP5P21372 849 aaPredicted RBP5.13□□□□□ -1.59
SEC9YGR009C ROX1P25042 368 aa5.13□□□□□ -1.59
SEC9YGR009C MRM1P25270 412 aa5.13□□□□□ -1.59
SEC9YGR009C PTP2P29461 750 aa5.13□□□□□ -1.59
SEC9YGR009C NPL6P32832 435 aa5.13□□□□□ -1.59
SEC9YGR009C TFC4P33339 1025 aa5.13□□□□□ -1.59
SEC9YGR009C YBR138CP38277 524 aa5.13□□□□□ -1.59
SEC9YGR009C AXL1P40851 1208 aa5.13□□□□□ -1.59
SEC9YGR009C GYP8P43570 497 aa5.13□□□□□ -1.59
SEC9YGR009C ALB1P47019 175 aaPredicted RBP5.13□□□□□ -1.59
SEC9YGR009C NCS6P53088 359 aa5.13□□□□□ -1.59
SEC9YGR009C CGR1P53188 120 aa5.13□□□□□ -1.59
SEC9YGR009C YNL146WP53906 100 aa5.13□□□□□ -1.59
SEC9YGR009C FYV6P53913 173 aa5.13□□□□□ -1.59
SEC9YGR009C RTN1Q04947 295 aaKnown RBP5.13□□□□□ -1.59
SEC9YGR009C ESC2Q06340 456 aa5.13□□□□□ -1.59
SEC9YGR009C LAG2Q92325 660 aa5.13□□□□□ -1.59
SEC9YGR009C APA1P16550 321 aaKnown RBP5.13□□□□□ -1.59
SEC9YGR009C NPR1P22211 790 aa5.13□□□□□ -1.59
SEC9YGR009C RPL8BP29453 256 aaKnown RBP5.13□□□□□ -1.59
SEC9YGR009C MGM1P32266 881 aa5.13□□□□□ -1.59
SEC9YGR009C SLA2P33338 968 aa5.13□□□□□ -1.59
SEC9YGR009C ARL1P38116 183 aaKnown RBP5.13□□□□□ -1.59
SEC9YGR009C COS111P38308 924 aa5.13□□□□□ -1.59
SEC9YGR009C CIN4P39110 191 aa5.13□□□□□ -1.59
SEC9YGR009C DSS1P39112 969 aa5.13□□□□□ -1.59
SEC9YGR009C RVS167P39743 482 aaKnown RBP5.13□□□□□ -1.59
SEC9YGR009C YTA12P40341 825 aa5.13□□□□□ -1.59
SEC9YGR009C SPO22P40511 975 aa5.13□□□□□ -1.59
SEC9YGR009C XKS1P42826 600 aa5.13□□□□□ -1.59
SEC9YGR009C DUG1P43616 481 aaKnown RBP5.13□□□□□ -1.59
SEC9YGR009C POL31P46957 487 aa5.13□□□□□ -1.59
SEC9YGR009C MAD3P47074 515 aa5.13□□□□□ -1.59
SEC9YGR009C ECL1P48235 211 aa5.13□□□□□ -1.59
SEC9YGR009C ISM1P48526 1002 aa5.13□□□□□ -1.59
SEC9YGR009C ALT1P52893 592 aa5.13□□□□□ -1.59
SEC9YGR009C SIW14P53965 281 aa5.13□□□□□ -1.59
SEC9YGR009C VPS9P54787 451 aa5.13□□□□□ -1.59
SEC9YGR009C FOX2Q02207 900 aaKnown RBP5.13□□□□□ -1.59
SEC9YGR009C ECM7Q06200 448 aa5.13□□□□□ -1.59
SEC9YGR009C ATG13Q06628 738 aa5.13□□□□□ -1.59
SEC9YGR009C FAL1Q12099 399 aaKnown RBP5.13□□□□□ -1.59
SEC9YGR009C AVL9Q12500 764 aa5.13□□□□□ -1.59
SEC9YGR009C SRF1Q12516 437 aa5.13□□□□□ -1.59
SEC9YGR009C SUP45P12385 437 aaKnown RBP5.12□□□□□ -1.59
SEC9YGR009C LAT1P12695 482 aaKnown RBP5.12□□□□□ -1.59
SEC9YGR009C NCP1P16603 691 aaKnown RBP5.12□□□□□ -1.59
SEC9YGR009C DBP3P20447 523 aaKnown RBP5.12□□□□□ -1.59
SEC9YGR009C MSB1P21339 1137 aaKnown RBP5.12□□□□□ -1.59
SEC9YGR009C ISY1P21374 235 aaPredicted RBP5.12□□□□□ -1.59
SEC9YGR009C CDC10P25342 322 aaKnown RBP5.12□□□□□ -1.59
SEC9YGR009C KCC4P25389 1037 aa5.12□□□□□ -1.59
SEC9YGR009C SEC21P32074 935 aaKnown RBP5.12□□□□□ -1.59
SEC9YGR009C YUH1P35127 236 aa5.12□□□□□ -1.59
SEC9YGR009C YKL063CP35725 167 aa5.12□□□□□ -1.59
SEC9YGR009C RIM4P38741 713 aa5.12□□□□□ -1.59
SEC9YGR009C KEL1P38853 1164 aaKnown RBP5.12□□□□□ -1.59
SEC9YGR009C YIL077CP40508 320 aa5.12□□□□□ -1.59
SEC9YGR009C ARF3P40994 183 aaRIP-Chip data5.12□□□□□ -1.59not detected
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms