RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W MRPS35P53292 345 aa3.46□□□□□ -1.86
NIC96YFR002W SWM1Q12379 170 aa3.46□□□□□ -1.86
NIC96YFR002W KTR4P38131 464 aa3.45□□□□□ -1.86
NIC96YFR002W DAM1P53267 343 aa3.45□□□□□ -1.86
NIC96YFR002W ASI2P53895 289 aa3.45□□□□□ -1.86
NIC96YFR002W TRM11Q12463 433 aa3.45□□□□□ -1.86
NIC96YFR002W MET5P47169 1442 aa3.45□□□□□ -1.86
NIC96YFR002W SPC29P33419 253 aa3.45□□□□□ -1.86
NIC96YFR002W SUL1P38359 859 aa3.45□□□□□ -1.86
NIC96YFR002W ATP25Q03153 612 aa3.45□□□□□ -1.86
NIC96YFR002W THI21Q08975 551 aa3.45□□□□□ -1.86
NIC96YFR002W ESC1Q03661 1658 aaKnown RBP3.44□□□□□ -1.86
NIC96YFR002W PHR1P05066 565 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
NIC96YFR002W RAD53P22216 821 aa3.44□□□□□ -1.86
NIC96YFR002W VHR1P40522 640 aa3.44□□□□□ -1.86
NIC96YFR002W MET7Q08645 548 aa3.44□□□□□ -1.86
NIC96YFR002W ERR1P0CX10 437 aa3.44□□□□□ -1.86
NIC96YFR002W ERR2P0CX11 437 aa3.44□□□□□ -1.86
NIC96YFR002W RPP1P38786 293 aa3.44□□□□□ -1.86
NIC96YFR002W HXT16P47185 567 aa3.44□□□□□ -1.86
NIC96YFR002W MAL11P53048 616 aa3.44□□□□□ -1.86
NIC96YFR002W PRC1P00729 532 aa3.43□□□□□ -1.86
NIC96YFR002W MOH1P38191 138 aa3.43□□□□□ -1.86
NIC96YFR002W RPN4Q03465 531 aa3.43□□□□□ -1.86
NIC96YFR002W MUS81Q04149 632 aaPredicted RBP3.43□□□□□ -1.86
NIC96YFR002W REH1Q06709 432 aa3.43□□□□□ -1.86
NIC96YFR002W GPR1Q12361 961 aa3.43□□□□□ -1.86
NIC96YFR002W YBR182C-AQ8TGU6 64 aa3.43□□□□□ -1.86
NIC96YFR002W IRC20Q06554 1556 aa3.43□□□□□ -1.86
NIC96YFR002W SSY5P47002 699 aa3.43□□□□□ -1.86
NIC96YFR002W RNT1Q02555 471 aa3.43□□□□□ -1.86
NIC96YFR002W YCF1P39109 1515 aaKnown RBP3.43□□□□□ -1.86
NIC96YFR002W OAR1P35731 278 aa3.42□□□□□ -1.86
NIC96YFR002W SAK1P38990 1142 aa3.42□□□□□ -1.86
NIC96YFR002W GDH3P39708 457 aa3.42□□□□□ -1.86
NIC96YFR002W BUD6P41697 788 aa3.42□□□□□ -1.86
NIC96YFR002W PFA3P42836 336 aa3.42□□□□□ -1.86
NIC96YFR002W YDR514CQ04408 483 aa3.42□□□□□ -1.86
NIC96YFR002W PPR1P07272 904 aaPredicted RBP3.42□□□□□ -1.86
NIC96YFR002W ALG7P07286 448 aa3.42□□□□□ -1.86
NIC96YFR002W SRP40P32583 406 aaPredicted RBP3.42□□□□□ -1.86
NIC96YFR002W TIM23P32897 222 aa3.42□□□□□ -1.86
NIC96YFR002W PBP2P38151 413 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
NIC96YFR002W SET5P38890 526 aaKnown RBP3.42□□□□□ -1.86
NIC96YFR002W CHZ1P40019 153 aaPredicted RBP3.42□□□□□ -1.86
NIC96YFR002W FKH2P41813 862 aa3.42□□□□□ -1.86
NIC96YFR002W PER1P25625 357 aa3.41□□□□□ -1.86
NIC96YFR002W YKL091CP33324 310 aaKnown RBP3.41□□□□□ -1.86
NIC96YFR002W SAP190P36123 1033 aa3.41□□□□□ -1.86
NIC96YFR002W PZF1P39933 429 aa3.41□□□□□ -1.86
NIC96YFR002W ELO3P40319 345 aa3.41□□□□□ -1.86
NIC96YFR002W ASM4Q05166 528 aa3.41□□□□□ -1.86
NIC96YFR002W YOR131CQ12486 218 aa3.41□□□□□ -1.86
NIC96YFR002W PKH1Q03407 766 aa3.41□□□□□ -1.86
NIC96YFR002W FRE5Q08908 694 aa3.41□□□□□ -1.86
NIC96YFR002W HIR3P47171 1648 aa3.41□□□□□ -1.86
NIC96YFR002W MET3P08536 511 aa3.4□□□□□ -1.86
NIC96YFR002W YBR053CP38235 358 aa3.4□□□□□ -1.86
NIC96YFR002W RLP7P40693 322 aaKnown RBP3.4□□□□□ -1.86
NIC96YFR002W MUK1Q02866 612 aa3.4□□□□□ -1.86
NIC96YFR002W YMR206WQ03695 313 aa3.4□□□□□ -1.86
NIC96YFR002W DLT1Q04216 342 aa3.4□□□□□ -1.86
NIC96YFR002W YDR338CQ05497 695 aa3.4□□□□□ -1.86
NIC96YFR002W RSC3Q06639 885 aa3.4□□□□□ -1.86
NIC96YFR002W OMS1Q06668 471 aa3.4□□□□□ -1.86
NIC96YFR002W YLR415CO13578 112 aa3.4□□□□□ -1.87
NIC96YFR002W HSV2P50079 448 aaPredicted RBP3.4□□□□□ -1.87
NIC96YFR002W MUP1P50276 574 aa3.4□□□□□ -1.87
NIC96YFR002W ZIP2P53061 704 aa3.4□□□□□ -1.87
NIC96YFR002W TAD3Q9URQ3 322 aa3.4□□□□□ -1.87
NIC96YFR002W RPA190P10964 1664 aaKnown RBP3.4□□□□□ -1.87
NIC96YFR002W MTC2P34246 357 aa3.39□□□□□ -1.87
NIC96YFR002W STB4P50104 949 aa3.39□□□□□ -1.87
NIC96YFR002W CAF20P12962 161 aaKnown RBP3.39□□□□□ -1.87
NIC96YFR002W PPS1P38148 807 aa3.39□□□□□ -1.87
NIC96YFR002W SIC1P38634 284 aa3.39□□□□□ -1.87
NIC96YFR002W SHR5P41912 237 aa3.39□□□□□ -1.87
NIC96YFR002W ADY4Q05955 493 aa3.39□□□□□ -1.87
NIC96YFR002W DIF1O13577 133 aa3.38□□□□□ -1.87
NIC96YFR002W NUP82P40368 713 aa3.38□□□□□ -1.87
NIC96YFR002W NRG1Q03125 231 aa3.38□□□□□ -1.87
NIC96YFR002W MDM12Q92328 271 aa3.38□□□□□ -1.87
NIC96YFR002W GEA2P39993 1459 aaKnown RBP3.38□□□□□ -1.87
NIC96YFR002W MCD4P36051 919 aa3.38□□□□□ -1.87
NIC96YFR002W ALY2P47029 1046 aa3.38□□□□□ -1.87
NIC96YFR002W ZDS1P50111 915 aaKnown RBP3.38□□□□□ -1.87
NIC96YFR002W TMN2Q04562 672 aa3.38□□□□□ -1.87
NIC96YFR002W MCH5Q08777 521 aa3.38□□□□□ -1.87
NIC96YFR002W TGL5Q12043 749 aa3.38□□□□□ -1.87
NIC96YFR002W NGG1P32494 702 aa3.37□□□□□ -1.87
NIC96YFR002W ACF2Q12168 779 aa3.37□□□□□ -1.87
NIC96YFR002W CDC25P04821 1589 aa3.37□□□□□ -1.87
NIC96YFR002W CDC9P04819 755 aa3.37□□□□□ -1.87
NIC96YFR002W MEF1P25039 761 aa3.37□□□□□ -1.87
NIC96YFR002W YJL163CP46996 555 aa3.37□□□□□ -1.87
NIC96YFR002W MTR3P48240 250 aaPredicted RBP3.37□□□□□ -1.87
NIC96YFR002W CRR1Q05790 422 aa3.37□□□□□ -1.87
NIC96YFR002W CIT2P08679 460 aa3.36□□□□□ -1.87
NIC96YFR002W AMA1P50082 593 aa3.36□□□□□ -1.87
NIC96YFR002W UBA2P52488 636 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms