RNA–Protein interactions for RNA: YER161C

SPT2, Transcript of Protein involved in negative regulation of transcription, yeast

Gene SPT2, Length 1,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT2	YER161C	ERT1	P38140	529 aa		4.11	□□□□□ -1.75
SPT2	YER161C	PBY1	P38254	753 aa		4.11	□□□□□ -1.75
SPT2	YER161C	SNF7	P39929	240 aa	Known RBP	4.11	□□□□□ -1.75
SPT2	YER161C	VPS27	P40343	622 aa	Known RBP	4.11	□□□□□ -1.75
SPT2	YER161C	YNL193W	P53870	558 aa		4.11	□□□□□ -1.75
SPT2	YER161C	UGO1	Q03327	502 aa		4.11	□□□□□ -1.75
SPT2	YER161C	AIM39	Q08223	395 aa		4.11	□□□□□ -1.75
SPT2	YER161C	NPC2	Q12408	173 aa		4.11	□□□□□ -1.75
SPT2	YER161C	MPD2	Q99316	277 aa		4.11	□□□□□ -1.75
SPT2	YER161C	TOM70	P07213	617 aa	Known RBP	4.1	□□□□□ -1.75
SPT2	YER161C	MTC2	P34246	357 aa		4.1	□□□□□ -1.75
SPT2	YER161C	CCC2	P38995	1004 aa		4.1	□□□□□ -1.75
SPT2	YER161C	PEX14	P53112	341 aa		4.1	□□□□□ -1.75
SPT2	YER161C	YGR021W	P53212	290 aa		4.1	□□□□□ -1.75
SPT2	YER161C	PRP9	P19736	530 aa	Known RBP	4.09	□□□□□ -1.75
SPT2	YER161C	CDC12	P32468	407 aa	Known RBP	4.09	□□□□□ -1.75
SPT2	YER161C	TYS1	P36421	394 aa	Known RBP	4.09	□□□□□ -1.75
SPT2	YER161C	GDH3	P39708	457 aa		4.09	□□□□□ -1.75
SPT2	YER161C	BUL1	P48524	976 aa		4.09	□□□□□ -1.75
SPT2	YER161C	UBA2	P52488	636 aa		4.09	□□□□□ -1.75
SPT2	YER161C	SVL3	Q03088	825 aa	Known RBP	4.09	□□□□□ -1.75
SPT2	YER161C	GIR2	Q03768	265 aa	Predicted RBP	4.09	□□□□□ -1.75
SPT2	YER161C	ATP4	P05626	244 aa		4.08	□□□□□ -1.76
SPT2	YER161C	NPP1	P25353	742 aa		4.08	□□□□□ -1.76
SPT2	YER161C	FUN30	P31380	1131 aa		4.08	□□□□□ -1.76
SPT2	YER161C	TFC4	P33339	1025 aa		4.08	□□□□□ -1.76
SPT2	YER161C	YBR284W	P38150	797 aa		4.08	□□□□□ -1.76
SPT2	YER161C	PEA2	P40091	420 aa		4.08	□□□□□ -1.76
SPT2	YER161C	VID27	P40157	782 aa		4.08	□□□□□ -1.76
SPT2	YER161C	GPP1	P41277	250 aa	Known RBP	4.08	□□□□□ -1.76
SPT2	YER161C	NCS6	P53088	359 aa		4.08	□□□□□ -1.76
SPT2	YER161C	UTP8	P53276	713 aa	Known RBP	4.08	□□□□□ -1.76
SPT2	YER161C	DUS3	Q06053	668 aa	Known RBP	4.08	□□□□□ -1.76
SPT2	YER161C	TRE2	Q08693	809 aa		4.08	□□□□□ -1.76
SPT2	YER161C	MEF1	P25039	761 aa		4.07	□□□□□ -1.76
SPT2	YER161C	KAR4	P25583	335 aa		4.07	□□□□□ -1.76
SPT2	YER161C	EUG1	P32474	517 aa		4.07	□□□□□ -1.76
SPT2	YER161C	MFT1	P33441	392 aa	Known RBP	4.07	□□□□□ -1.76
SPT2	YER161C	IES1	P43579	692 aa		4.07	□□□□□ -1.76
SPT2	YER161C	GPG1	P53130	126 aa		4.07	□□□□□ -1.76
SPT2	YER161C	COG6	P53959	839 aa		4.07	□□□□□ -1.76
SPT2	YER161C	YNL034W	P53963	612 aa		4.07	□□□□□ -1.76
SPT2	YER161C	YNL018C	P53976	612 aa		4.07	□□□□□ -1.76
SPT2	YER161C	TRM13	Q12383	476 aa		4.07	□□□□□ -1.76
SPT2	YER161C	INO80	P53115	1489 aa		4.06	□□□□□ -1.76
SPT2	YER161C	HSF1	P10961	833 aa		4.06	□□□□□ -1.76
SPT2	YER161C	SST2	P11972	698 aa	Known RBP	4.06	□□□□□ -1.76
SPT2	YER161C	PGI1	P12709	554 aa	Known RBP	4.06	□□□□□ -1.76
SPT2	YER161C	TOP3	P13099	656 aa		4.06	□□□□□ -1.76
SPT2	YER161C	GSY1	P23337	708 aa		4.06	□□□□□ -1.76
SPT2	YER161C	VBA3	P25594	458 aa		4.06	□□□□□ -1.76
SPT2	YER161C	MRS6	P32864	603 aa	Known RBP	4.06	□□□□□ -1.76
SPT2	YER161C	AFR1	P33304	620 aa		4.06	□□□□□ -1.76
SPT2	YER161C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SPT2	YER161C	YBR071W	P38243	211 aa		4.06	□□□□□ -1.76
SPT2	YER161C	RPT2	P40327	437 aa	Known RBP	4.06	□□□□□ -1.76
SPT2	YER161C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SPT2	YER161C	SLU7	Q02775	382 aa	Known RBP	4.06	□□□□□ -1.76
SPT2	YER161C	HFD1	Q04458	532 aa		4.06	□□□□□ -1.76
SPT2	YER161C	ENB1	Q08299	606 aa		4.06	□□□□□ -1.76
SPT2	YER161C	YLL058W	Q12198	575 aa		4.06	□□□□□ -1.76
SPT2	YER161C	HBN1	Q96VH4	193 aa		4.06	□□□□□ -1.76
SPT2	YER161C	PIF1	P07271	859 aa		4.05	□□□□□ -1.76
SPT2	YER161C	PLC1	P32383	869 aa		4.05	□□□□□ -1.76
SPT2	YER161C	TSL1	P38427	1098 aa	Known RBP	4.05	□□□□□ -1.76
SPT2	YER161C	URM1	P40554	99 aa	Predicted RBP	4.05	□□□□□ -1.76
SPT2	YER161C	MAL11	P53048	616 aa		4.05	□□□□□ -1.76
SPT2	YER161C	SPC105	P53148	917 aa		4.05	□□□□□ -1.76
SPT2	YER161C	UBX4	P54730	416 aa		4.05	□□□□□ -1.76
SPT2	YER161C	TGL2	P54857	326 aa		4.05	□□□□□ -1.76
SPT2	YER161C	SSL1	Q04673	461 aa	Predicted RBP	4.05	□□□□□ -1.76
SPT2	YER161C	YLR040C	Q07988	224 aa		4.05	□□□□□ -1.76
SPT2	YER161C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
SPT2	YER161C	RAD18	P10862	487 aa		4.04	□□□□□ -1.76
SPT2	YER161C	CAD1	P24813	409 aa	Known RBP	4.04	□□□□□ -1.76
SPT2	YER161C	RPD3	P32561	433 aa		4.04	□□□□□ -1.76
SPT2	YER161C	YER158C	P40095	573 aa		4.04	□□□□□ -1.76
SPT2	YER161C	YPR196W	Q06595	470 aa		4.04	□□□□□ -1.76
SPT2	YER161C	YDR306C	Q06640	478 aa		4.04	□□□□□ -1.76
SPT2	YER161C	UPC2	Q12151	913 aa		4.04	□□□□□ -1.76
SPT2	YER161C	INH1	P01097	85 aa		4.03	□□□□□ -1.76
SPT2	YER161C	EFT1	P32324	842 aa	Known RBP	4.03	□□□□□ -1.76
SPT2	YER161C	IES5	P40060	125 aa		4.03	□□□□□ -1.76
SPT2	YER161C	ATF1	P40353	525 aa		4.03	□□□□□ -1.76
SPT2	YER161C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
SPT2	YER161C	PIP2	P52960	996 aa		4.03	□□□□□ -1.76
SPT2	YER161C	ESF2	P53743	316 aa	Known RBP	4.03	□□□□□ -1.76
SPT2	YER161C	MET14	Q02196	202 aa		4.03	□□□□□ -1.76
SPT2	YER161C	YMR206W	Q03695	313 aa		4.03	□□□□□ -1.76
SPT2	YER161C	MTQ2	Q03920	221 aa	Predicted RBP	4.03	□□□□□ -1.76
SPT2	YER161C	YLR001C	Q07895	862 aa		4.03	□□□□□ -1.76
SPT2	YER161C	MDM12	Q92328	271 aa		4.03	□□□□□ -1.76
SPT2	YER161C	GAL1	P04385	528 aa		4.02	□□□□□ -1.77
SPT2	YER161C	MPH2	P0CD99	609 aa		4.02	□□□□□ -1.77
SPT2	YER161C	GFD2	P25370	566 aa	Known RBP	4.02	□□□□□ -1.77
SPT2	YER161C	SSH4	P32343	579 aa		4.02	□□□□□ -1.77
SPT2	YER161C	AAR2	P32357	355 aa	Predicted RBP	4.02	□□□□□ -1.77
SPT2	YER161C	PRP19	P32523	503 aa	Known RBP	4.02	□□□□□ -1.77
SPT2	YER161C	STE14	P32584	239 aa		4.02	□□□□□ -1.77
SPT2	YER161C	PTH2	P34222	208 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms