RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W RRP46P53256 223 aaPredicted RBP5.78□□□□□ -1.48
UBP9YER098W SNP1Q00916 300 aaPredicted RBP5.78□□□□□ -1.48
UBP9YER098W ATP25Q03153 612 aa5.78□□□□□ -1.48
UBP9YER098W PHM6Q05637 104 aa5.78□□□□□ -1.48
UBP9YER098W AVO1Q08236 1176 aa5.78□□□□□ -1.48
UBP9YER098W RMP1Q12530 201 aa5.78□□□□□ -1.48
UBP9YER098W PDR12Q02785 1511 aa5.78□□□□□ -1.48
UBP9YER098W LTE1P07866 1435 aa5.78□□□□□ -1.48
UBP9YER098W KCC4P25389 1037 aa5.78□□□□□ -1.48
UBP9YER098W KIP1P28742 1111 aa5.78□□□□□ -1.48
UBP9YER098W EMC3P36039 253 aa5.78□□□□□ -1.48
UBP9YER098W OSH7P38755 437 aa5.78□□□□□ -1.48
UBP9YER098W QNS1P38795 714 aaKnown RBP5.78□□□□□ -1.48
UBP9YER098W RTT107P38850 1070 aa5.78□□□□□ -1.48
UBP9YER098W RRP8P38961 392 aaKnown RBP5.78□□□□□ -1.48
UBP9YER098W CEP3P40969 608 aa5.78□□□□□ -1.48
UBP9YER098W BUD27P43573 796 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
UBP9YER098W PRP31P49704 494 aaPredicted RBP5.78□□□□□ -1.48
UBP9YER098W MRS2Q01926 470 aa5.78□□□□□ -1.48
UBP9YER098W HRQ1Q05549 1077 aa5.78□□□□□ -1.48
UBP9YER098W MLC2Q06580 163 aa5.78□□□□□ -1.48
UBP9YER098W TLG2Q08144 397 aa5.78□□□□□ -1.48
UBP9YER098W YOL087CQ99247 1116 aa5.78□□□□□ -1.48
UBP9YER098W HAP1P0CE41 1502 aa5.78□□□□□ -1.48
UBP9YER098W DOP1Q03921 1698 aa5.78□□□□□ -1.48
UBP9YER098W PSK1P31374 1356 aa5.77□□□□□ -1.49
UBP9YER098W DIT1P21623 536 aa5.77□□□□□ -1.49
UBP9YER098W BCK2P33306 851 aa5.77□□□□□ -1.49
UBP9YER098W PTH2P34222 208 aa5.77□□□□□ -1.49
UBP9YER098W SWH1P35845 1188 aa5.77□□□□□ -1.49
UBP9YER098W YKL133CP36066 463 aa5.77□□□□□ -1.49
UBP9YER098W HSE1P38753 452 aa5.77□□□□□ -1.49
UBP9YER098W CCM1P48237 864 aaPredicted RBP5.77□□□□□ -1.49
UBP9YER098W YGR045CP53229 120 aa5.77□□□□□ -1.49
UBP9YER098W DAM1P53267 343 aa5.77□□□□□ -1.49
UBP9YER098W GIR2Q03768 265 aaPredicted RBP5.77□□□□□ -1.49
UBP9YER098W TY1A-DR2Q03964 440 aaKnown RBP5.77□□□□□ -1.49
UBP9YER098W GUP2Q08929 609 aa5.77□□□□□ -1.49
UBP9YER098W ENV7Q12003 364 aa5.77□□□□□ -1.49
UBP9YER098W MPH2P0CD99 609 aa5.77□□□□□ -1.49
UBP9YER098W YKL151CP36059 337 aa5.77□□□□□ -1.49
UBP9YER098W VPS41P38959 992 aa5.77□□□□□ -1.49
UBP9YER098W BDH2P39713 417 aa5.77□□□□□ -1.49
UBP9YER098W MNN11P46985 422 aaKnown RBP5.77□□□□□ -1.49
UBP9YER098W YGR153WP48238 217 aa5.77□□□□□ -1.49
UBP9YER098W YDR338CQ05497 695 aa5.77□□□□□ -1.49
UBP9YER098W RSA3Q05942 220 aaKnown RBP5.77□□□□□ -1.49
UBP9YER098W SPE2P21182 396 aa5.76□□□□□ -1.49
UBP9YER098W SSH4P32343 579 aa5.76□□□□□ -1.49
UBP9YER098W ESL2P36168 1195 aa5.76□□□□□ -1.49
UBP9YER098W MRPL10P36520 322 aa5.76□□□□□ -1.49
UBP9YER098W KTR4P38131 464 aa5.76□□□□□ -1.49
UBP9YER098W ELA1P53861 379 aaPredicted RBP5.76□□□□□ -1.49
UBP9YER098W YMR265CQ03508 461 aaKnown RBP5.76□□□□□ -1.49
UBP9YER098W YMR074CQ04773 145 aa5.76□□□□□ -1.49
UBP9YER098W TY1B-JR2P47100 1755 aaKnown RBP5.76□□□□□ -1.49
UBP9YER098W TY1B-ER2Q03619 1755 aa5.76□□□□□ -1.49
UBP9YER098W TY1B-MR1Q04214 1755 aa5.76□□□□□ -1.49
UBP9YER098W TY1B-MR2Q04670 1755 aaKnown RBP5.76□□□□□ -1.49
UBP9YER098W TY1B-LR1Q12088 1755 aaKnown RBP5.76□□□□□ -1.49
UBP9YER098W TY1B-NL1Q12112 1755 aa5.76□□□□□ -1.49
UBP9YER098W TY1B-GR1Q12141 1755 aa5.76□□□□□ -1.49
UBP9YER098W TY1B-BLQ12490 1755 aa5.76□□□□□ -1.49
UBP9YER098W SES1P07284 462 aaKnown RBP5.76□□□□□ -1.49
UBP9YER098W SRP54P20424 541 aaKnown RBP5.76□□□□□ -1.49
UBP9YER098W PRO1P32264 428 aa5.76□□□□□ -1.49
UBP9YER098W BIT2P38346 545 aa5.76□□□□□ -1.49
UBP9YER098W YHL041WP38730 149 aa5.76□□□□□ -1.49
UBP9YER098W RSM25P40496 264 aa5.76□□□□□ -1.49
UBP9YER098W YGL082WP53155 381 aa5.76□□□□□ -1.49
UBP9YER098W THI22Q06490 572 aa5.76□□□□□ -1.49
UBP9YER098W YKL068W-AQ3E826 78 aa5.76□□□□□ -1.49
UBP9YER098W SLA2P33338 968 aa5.75□□□□□ -1.49
UBP9YER098W HIS6P40545 261 aa5.75□□□□□ -1.49
UBP9YER098W TAN1P53072 289 aaPredicted RBP5.75□□□□□ -1.49
UBP9YER098W HST1P53685 503 aa5.75□□□□□ -1.49
UBP9YER098W YDR514CQ04408 483 aa5.75□□□□□ -1.49
UBP9YER098W TY1B-BRQ12193 1756 aa5.74□□□□□ -1.49
UBP9YER098W TY1B-GR3Q12316 1755 aa5.74□□□□□ -1.49
UBP9YER098W TY1B-ORQ92393 1755 aa5.74□□□□□ -1.49
UBP9YER098W ERS1P17261 260 aa5.74□□□□□ -1.49
UBP9YER098W GIP2P40036 548 aa5.74□□□□□ -1.49
UBP9YER098W NIT3P49954 291 aa5.74□□□□□ -1.49
UBP9YER098W ECM9Q02202 377 aa5.74□□□□□ -1.49
UBP9YER098W OPT2Q06593 877 aa5.74□□□□□ -1.49
UBP9YER098W ACM1Q08981 209 aa5.74□□□□□ -1.49
UBP9YER098W RTC1Q08281 1341 aa5.74□□□□□ -1.49
UBP9YER098W DRS2P39524 1355 aa5.74□□□□□ -1.49
UBP9YER098W DBF20P32328 564 aa5.74□□□□□ -1.49
UBP9YER098W HEM12P32347 362 aaPredicted RBP5.74□□□□□ -1.49
UBP9YER098W TSL1P38427 1098 aaKnown RBP5.74□□□□□ -1.49
UBP9YER098W DOT6P40059 670 aaKnown RBP5.74□□□□□ -1.49
UBP9YER098W YFL054CP43549 646 aa5.74□□□□□ -1.49
UBP9YER098W CUZ1P53899 274 aa5.74□□□□□ -1.49
UBP9YER098W NHX1Q04121 633 aa5.74□□□□□ -1.49
UBP9YER098W NKP2Q06162 153 aa5.74□□□□□ -1.49
UBP9YER098W RLP24Q07915 199 aaKnown RBP5.74□□□□□ -1.49
UBP9YER098W NBA1Q08229 501 aaKnown RBP5.74□□□□□ -1.49
UBP9YER098W PLP2Q12017 286 aa5.74□□□□□ -1.49
UBP9YER098W YOR093CQ12275 1648 aa5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms