RNA–Protein interactions for RNA: YER038C

KRE29, Transcript of Subunit of the SMC5-SMC6 complex, yeast

Gene KRE29, Length 1,395 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE29	YER038C	YJR107W	P47145	328 aa		4.97	□□□□□ -1.61
KRE29	YER038C	GNP1	P48813	663 aa		4.97	□□□□□ -1.61
KRE29	YER038C	HXT17	P53631	564 aa		4.97	□□□□□ -1.61
KRE29	YER038C	DUS1	P53759	423 aa	Known RBP	4.97	□□□□□ -1.61
KRE29	YER038C	HXT15	P54854	567 aa		4.97	□□□□□ -1.61
KRE29	YER038C	IRC4	Q03036	179 aa		4.97	□□□□□ -1.61
KRE29	YER038C	SVS1	Q12254	260 aa		4.97	□□□□□ -1.61
KRE29	YER038C	RVB2	Q12464	471 aa	Known RBP	4.97	□□□□□ -1.61
KRE29	YER038C	ADR1	P07248	1323 aa		4.96	□□□□□ -1.62
KRE29	YER038C	MLS1	P30952	554 aa		4.96	□□□□□ -1.62
KRE29	YER038C	DOM34	P33309	386 aa		4.96	□□□□□ -1.62
KRE29	YER038C	NUG1	P40010	520 aa	Known RBP	4.96	□□□□□ -1.62
KRE29	YER038C	YML020W	Q03722	664 aa		4.96	□□□□□ -1.62
KRE29	YER038C	SPR28	Q04921	423 aa		4.96	□□□□□ -1.62
KRE29	YER038C	CBP1	P07252	654 aa		4.95	□□□□□ -1.62
KRE29	YER038C	RPS19A	P07280	144 aa	Known RBP	4.95	□□□□□ -1.62
KRE29	YER038C	RPS19B	P07281	144 aa	Predicted RBP	4.95	□□□□□ -1.62
KRE29	YER038C	RPS7A	P26786	190 aa	Known RBP	4.95	□□□□□ -1.62
KRE29	YER038C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
KRE29	YER038C	PNS1	Q12412	539 aa		4.95	□□□□□ -1.62
KRE29	YER038C	GSC2	P40989	1895 aa		4.94	□□□□□ -1.62
KRE29	YER038C	POM152	P39685	1337 aa		4.94	□□□□□ -1.62
KRE29	YER038C	GAL10	P04397	699 aa		4.94	□□□□□ -1.62
KRE29	YER038C	DAL5	P15365	543 aa		4.94	□□□□□ -1.62
KRE29	YER038C	HEM3	P28789	327 aa		4.94	□□□□□ -1.62
KRE29	YER038C	PEP7	P32609	515 aa		4.94	□□□□□ -1.62
KRE29	YER038C	PNT1	P38969	423 aa		4.94	□□□□□ -1.62
KRE29	YER038C	FYV10	P40492	516 aa		4.94	□□□□□ -1.62
KRE29	YER038C	YIL092W	P40497	633 aa		4.94	□□□□□ -1.62
KRE29	YER038C	MTC3	P53077	123 aa		4.94	□□□□□ -1.62
KRE29	YER038C	RRP15	Q06511	250 aa	Predicted RBP	4.94	□□□□□ -1.62
KRE29	YER038C	ACK1	Q07622	623 aa	Predicted RBP	4.94	□□□□□ -1.62
KRE29	YER038C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
KRE29	YER038C	GPB1	Q08886	897 aa		4.94	□□□□□ -1.62
KRE29	YER038C	WRS1	Q12109	432 aa	Known RBP	4.94	□□□□□ -1.62
KRE29	YER038C	GIN4	Q12263	1142 aa		4.94	□□□□□ -1.62
KRE29	YER038C	YER152C	P10356	443 aa		4.93	□□□□□ -1.62
KRE29	YER038C	DBP5	P20449	482 aa	Known RBP	4.93	□□□□□ -1.62
KRE29	YER038C	RPT3	P33298	428 aa	Known RBP	4.93	□□□□□ -1.62
KRE29	YER038C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
KRE29	YER038C	PLB2	Q03674	706 aa		4.93	□□□□□ -1.62
KRE29	YER038C	RLP24	Q07915	199 aa	Known RBP	4.93	□□□□□ -1.62
KRE29	YER038C	PSF3	Q12146	194 aa		4.93	□□□□□ -1.62
KRE29	YER038C	SEC18	P18759	758 aa	Known RBP	4.92	□□□□□ -1.62
KRE29	YER038C	BAS1	P22035	811 aa		4.92	□□□□□ -1.62
KRE29	YER038C	TRM2	P33753	639 aa		4.92	□□□□□ -1.62
KRE29	YER038C	MCM7	P38132	845 aa		4.92	□□□□□ -1.62
KRE29	YER038C	YFL054C	P43549	646 aa		4.92	□□□□□ -1.62
KRE29	YER038C	YFH7	P43591	353 aa		4.92	□□□□□ -1.62
KRE29	YER038C	DUS4	Q06063	367 aa		4.92	□□□□□ -1.62
KRE29	YER038C	ESF1	Q06344	628 aa	Known RBP	4.92	□□□□□ -1.62
KRE29	YER038C	YNG2	P38806	282 aa	Known RBP	4.91	□□□□□ -1.62
KRE29	YER038C	RRT6	P53117	311 aa	Predicted RBP	4.91	□□□□□ -1.62
KRE29	YER038C	RTT10	Q08924	1013 aa		4.91	□□□□□ -1.62
KRE29	YER038C	CSR2	Q12734	1121 aa		4.91	□□□□□ -1.62
KRE29	YER038C	STE11	P23561	717 aa		4.91	□□□□□ -1.62
KRE29	YER038C	RER2	P35196	286 aa		4.91	□□□□□ -1.62
KRE29	YER038C	DEF1	P35732	738 aa	Known RBP	4.91	□□□□□ -1.62
KRE29	YER038C	MPH1	P40562	993 aa		4.91	□□□□□ -1.62
KRE29	YER038C	YIR042C	P40586	236 aa		4.91	□□□□□ -1.62
KRE29	YER038C	ATG36	P46983	293 aa		4.91	□□□□□ -1.62
KRE29	YER038C	MNN10	P50108	393 aa	Known RBP	4.91	□□□□□ -1.62
KRE29	YER038C	MCM6	P53091	1017 aa	Known RBP	4.91	□□□□□ -1.62
KRE29	YER038C	GTF1	P53260	183 aa	Predicted RBP	4.91	□□□□□ -1.62
KRE29	YER038C	YNL193W	P53870	558 aa		4.91	□□□□□ -1.62
KRE29	YER038C	INM2	Q05533	292 aa		4.91	□□□□□ -1.62
KRE29	YER038C	TMA46	Q12000	345 aa	Known RBP	4.91	□□□□□ -1.62
KRE29	YER038C	HCM1	P25364	564 aa		4.9	□□□□□ -1.63
KRE29	YER038C	CDC20	P26309	610 aa		4.9	□□□□□ -1.63
KRE29	YER038C	GCD7	P32502	381 aa	Predicted RBP	4.9	□□□□□ -1.63
KRE29	YER038C	PTK1	P36002	662 aa	Predicted RBP	4.9	□□□□□ -1.63
KRE29	YER038C	GEM1	P39722	662 aa		4.9	□□□□□ -1.63
KRE29	YER038C	SPO1	P53541	631 aa		4.9	□□□□□ -1.63
KRE29	YER038C	RPN7	Q06103	429 aa	Known RBP	4.9	□□□□□ -1.63
KRE29	YER038C	GNT1	Q12096	491 aa		4.9	□□□□□ -1.63
KRE29	YER038C	RRI2	Q12348	645 aa		4.9	□□□□□ -1.63
KRE29	YER038C	HIF1	Q12373	385 aa		4.9	□□□□□ -1.63
KRE29	YER038C	SNF3	P10870	884 aa		4.89	□□□□□ -1.63
KRE29	YER038C	ASF1	P32447	279 aa		4.89	□□□□□ -1.63
KRE29	YER038C	PRS1	P32895	427 aa	Known RBP	4.89	□□□□□ -1.63
KRE29	YER038C	RMD1	Q03441	430 aa		4.89	□□□□□ -1.63
KRE29	YER038C	TIF35	Q04067	274 aa	Known RBP	4.89	□□□□□ -1.63
KRE29	YER038C	TMA10	Q06177	86 aa		4.89	□□□□□ -1.63
KRE29	YER038C	SPP382	Q06411	708 aa	Predicted RBP	4.89	□□□□□ -1.63
KRE29	YER038C	ACM1	Q08981	209 aa		4.89	□□□□□ -1.63
KRE29	YER038C	RPP2A	P05319	106 aa	Known RBP	4.88	□□□□□ -1.63
KRE29	YER038C	PIF1	P07271	859 aa		4.88	□□□□□ -1.63
KRE29	YER038C	SRM1	P21827	482 aa		4.88	□□□□□ -1.63
KRE29	YER038C	MOT2	P34909	587 aa	Known RBP	4.88	□□□□□ -1.63
KRE29	YER038C	APE3	P37302	537 aa	Known RBP	4.88	□□□□□ -1.63
KRE29	YER038C	KEL1	P38853	1164 aa	Known RBP	4.88	□□□□□ -1.63
KRE29	YER038C	TPO2	P53283	614 aa		4.88	□□□□□ -1.63
KRE29	YER038C	FLO1	P32768	1537 aa		4.87	□□□□□ -1.63
KRE29	YER038C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
KRE29	YER038C	ACE2	P21192	770 aa		4.87	□□□□□ -1.63
KRE29	YER038C	RAD53	P22216	821 aa		4.87	□□□□□ -1.63
KRE29	YER038C	TOA1	P32773	286 aa		4.87	□□□□□ -1.63
KRE29	YER038C	KTR3	P38130	404 aa	Predicted RBP	4.87	□□□□□ -1.63
KRE29	YER038C	FUN12	P39730	1002 aa	Known RBP	4.87	□□□□□ -1.63
KRE29	YER038C	NCS6	P53088	359 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms