RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	NIP1	P32497	812 aa	Known RBP	5.5	□□□□□ -1.53
DBF4	YDR052C	SMC1	P32908	1225 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	LAS1	P36146	502 aa	Predicted RBP	5.5	□□□□□ -1.53
DBF4	YDR052C	GIP1	P38229	639 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	YER034W	P40022	185 aa	Known RBP	5.5	□□□□□ -1.53
DBF4	YDR052C	MDR1	P53258	950 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	YLR287C	Q05881	355 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	PIG1	Q06216	648 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	VPS36	Q06696	566 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	YOR352W	Q08816	343 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	YPL277C	Q08989	487 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	ELG1	Q12050	791 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	BUD3	P25558	1636 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	SEM1	O94742	89 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	RPL24A	P04449	155 aa	Known RBP	5.5	□□□□□ -1.53
DBF4	YDR052C	GPA2	P10823	449 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	SEC65	P29478	273 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	YKL063C	P35725	167 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	MIA40	P36046	403 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	YKR015C	P36111	568 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	UIP5	P36137	443 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	ATP3	P38077	311 aa	Known RBP	5.5	□□□□□ -1.53
DBF4	YDR052C	YRO2	P38079	344 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	YBR287W	P38355	427 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	YAP3	P38749	330 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	HXT6	P39003	570 aa	Known RBP	5.5	□□□□□ -1.53
DBF4	YDR052C	HXT7	P39004	570 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	RGA1	P39083	1007 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	OAF1	P39720	1047 aa	Predicted RBP	5.5	□□□□□ -1.53
DBF4	YDR052C	YTA6	P40328	754 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	YFL066C	P43538	392 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	SNZ3	P43545	298 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	NOP9	P47077	666 aa	Known RBP	5.5	□□□□□ -1.53
DBF4	YDR052C	YJR054W	P47114	497 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	PSP2	P50109	593 aa	Known RBP	5.5	□□□□□ -1.53
DBF4	YDR052C	ALT1	P52893	592 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	SPC105	P53148	917 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	SNZ2	P53824	298 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	MEC3	Q02574	474 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	EMI2	Q04409	500 aa	Known RBP	5.5	□□□□□ -1.53
DBF4	YDR052C	ARV1	Q06541	321 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	MCM21	Q06675	368 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	TAF10	Q12030	206 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	MED4	Q12343	284 aa		5.5	□□□□□ -1.53
DBF4	YDR052C	COQ4	O13525	335 aa		5.49	□□□□□ -1.53
DBF4	YDR052C	SSB1	P11484	613 aa	Known RBP	5.49	□□□□□ -1.53
DBF4	YDR052C	KAR2	P16474	682 aa	Known RBP	5.49	□□□□□ -1.53
DBF4	YDR052C	MSB1	P21339	1137 aa	Known RBP	5.49	□□□□□ -1.53
DBF4	YDR052C	SUV3	P32580	737 aa		5.49	□□□□□ -1.53
DBF4	YDR052C	SSO1	P32867	290 aa		5.49	□□□□□ -1.53
DBF4	YDR052C	AAP1	P37898	856 aa	Known RBP	5.49	□□□□□ -1.53
DBF4	YDR052C	SDH8	P38345	138 aa		5.49	□□□□□ -1.53
DBF4	YDR052C	CCT2	P39076	527 aa	Known RBP	5.49	□□□□□ -1.53
DBF4	YDR052C	RPH1	P39956	796 aa		5.49	□□□□□ -1.53
DBF4	YDR052C	SSB2	P40150	613 aa	Known RBP	5.49	□□□□□ -1.53
DBF4	YDR052C	MEP1	P40260	492 aa		5.49	□□□□□ -1.53
DBF4	YDR052C	RIC1	P40395	1056 aa		5.49	□□□□□ -1.53
DBF4	YDR052C	MNN11	P46985	422 aa	Known RBP	5.49	□□□□□ -1.53
DBF4	YDR052C	MDE1	P47095	244 aa		5.49	□□□□□ -1.53
DBF4	YDR052C	PAN2	P53010	1115 aa	Predicted RBP	5.49	□□□□□ -1.53
DBF4	YDR052C	YGR054W	P53235	642 aa	Known RBP	5.49	□□□□□ -1.53
DBF4	YDR052C	NGL3	Q03210	505 aa		5.49	□□□□□ -1.53
DBF4	YDR052C	YOR289W	Q12012	251 aa	Predicted RBP	5.49	□□□□□ -1.53
DBF4	YDR052C	BUG1	Q12191	341 aa		5.49	□□□□□ -1.53
DBF4	YDR052C	GYP5	Q12344	894 aa		5.49	□□□□□ -1.53
DBF4	YDR052C	TUS1	Q06412	1307 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	CMD1	P06787	147 aa	Known RBP	5.48	□□□□□ -1.53
DBF4	YDR052C	PEX1	P24004	1043 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	LCB1	P25045	558 aa	Known RBP	5.48	□□□□□ -1.53
DBF4	YDR052C	PPH3	P32345	308 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	SLA1	P32790	1244 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	SQT1	P35184	431 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	SHM1	P37292	490 aa	Predicted RBP	5.48	□□□□□ -1.53
DBF4	YDR052C	SSF1	P38789	453 aa	Predicted RBP	5.48	□□□□□ -1.53
DBF4	YDR052C	MEF2	P39677	819 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	ULP2	P40537	1034 aa	Predicted RBP	5.48	□□□□□ -1.53
DBF4	YDR052C	CWC25	P53854	179 aa	Known RBP	5.48	□□□□□ -1.53
DBF4	YDR052C	SMC5	Q08204	1093 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	DCS2	Q12123	353 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	GET4	Q12125	312 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	TIP41	Q12199	356 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	SUP45	P12385	437 aa	Known RBP	5.48	□□□□□ -1.53
DBF4	YDR052C	TRM1	P15565	570 aa	Known RBP	5.48	□□□□□ -1.53
DBF4	YDR052C	OPI1	P21957	404 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	YCR051W	P25631	222 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	MCM4	P30665	933 aa	Known RBP	5.48	□□□□□ -1.53
DBF4	YDR052C	ACH1	P32316	526 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	LSM12	P38828	187 aa	Known RBP	5.48	□□□□□ -1.53
DBF4	YDR052C	DLD3	P39976	496 aa	Known RBP	5.48	□□□□□ -1.53
DBF4	YDR052C	TDA10	P42938	290 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	KAP114	P53067	1004 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	COS6	P53344	381 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	TMA64	Q04600	565 aa	Known RBP	5.48	□□□□□ -1.53
DBF4	YDR052C	YLR001C	Q07895	862 aa		5.48	□□□□□ -1.53
DBF4	YDR052C	RPS3	P05750	240 aa	Known RBP	5.47	□□□□□ -1.53
DBF4	YDR052C	SPS1	P08458	490 aa		5.47	□□□□□ -1.53
DBF4	YDR052C	MSS116	P15424	664 aa	Known RBP	5.47	□□□□□ -1.53
DBF4	YDR052C	DAP2	P18962	818 aa		5.47	□□□□□ -1.53
DBF4	YDR052C	SPS22	P25380	463 aa		5.47	□□□□□ -1.53
DBF4	YDR052C	PAT1	P25644	796 aa	Known RBP	5.47	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms