RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C FMP42Q04991 504 aa1.16□□□□□ -2.22
VAM6YDL077C PIG1Q06216 648 aa1.16□□□□□ -2.22
VAM6YDL077C SPP382Q06411 708 aaPredicted RBP1.16□□□□□ -2.22
VAM6YDL077C YLH47Q06493 454 aa1.16□□□□□ -2.22
VAM6YDL077C PSR1Q07800 427 aa1.16□□□□□ -2.22
VAM6YDL077C OSH2Q12451 1283 aa1.16□□□□□ -2.22
VAM6YDL077C RAD1P06777 1100 aa1.16□□□□□ -2.22
VAM6YDL077C LEU3P08638 886 aa1.16□□□□□ -2.22
VAM6YDL077C HEM1P09950 548 aaPredicted RBP1.16□□□□□ -2.22
VAM6YDL077C GCD2P12754 651 aaPredicted RBP1.16□□□□□ -2.22
VAM6YDL077C ATE1P16639 503 aa1.16□□□□□ -2.22
VAM6YDL077C VMA4P22203 233 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C PKC1P24583 1151 aa1.16□□□□□ -2.22
VAM6YDL077C RDS1P25611 832 aa1.16□□□□□ -2.22
VAM6YDL077C SWC3P31376 625 aa1.16□□□□□ -2.22
VAM6YDL077C PPH3P32345 308 aa1.16□□□□□ -2.22
VAM6YDL077C VMA8P32610 256 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C GRX4P32642 244 aa1.16□□□□□ -2.22
VAM6YDL077C UTP11P34247 250 aaPredicted RBP1.16□□□□□ -2.22
VAM6YDL077C FES1P38260 290 aa1.16□□□□□ -2.22
VAM6YDL077C SLX1P38324 304 aa1.16□□□□□ -2.22
VAM6YDL077C REI1P38344 393 aaPredicted RBP1.16□□□□□ -2.22
VAM6YDL077C SOH1P38633 127 aa1.16□□□□□ -2.22
VAM6YDL077C PIH1P38768 344 aa1.16□□□□□ -2.22
VAM6YDL077C SEN34P39707 275 aa1.16□□□□□ -2.22
VAM6YDL077C MAM1P40065 302 aa1.16□□□□□ -2.22
VAM6YDL077C SLX8P40072 274 aa1.16□□□□□ -2.22
VAM6YDL077C RLP7P40693 322 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C HUL4P40985 892 aa1.16□□□□□ -2.22
VAM6YDL077C TRS85P46944 698 aa1.16□□□□□ -2.22
VAM6YDL077C YGL176CP46945 554 aa1.16□□□□□ -2.22
VAM6YDL077C ENT3P47160 408 aa1.16□□□□□ -2.22
VAM6YDL077C YPT11P48559 417 aa1.16□□□□□ -2.22
VAM6YDL077C KAP114P53067 1004 aa1.16□□□□□ -2.22
VAM6YDL077C ESF2P53743 316 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C INA17Q02888 182 aa1.16□□□□□ -2.22
VAM6YDL077C CLU1Q03690 1277 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C NNT1Q05874 261 aa1.16□□□□□ -2.22
VAM6YDL077C YDL114WQ07530 308 aa1.16□□□□□ -2.22
VAM6YDL077C SMC5Q08204 1093 aa1.16□□□□□ -2.22
VAM6YDL077C NOB1Q08444 459 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C YPL225WQ08971 146 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C NEW1Q08972 1196 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C DCS2Q12123 353 aa1.16□□□□□ -2.22
VAM6YDL077C NOT5Q12514 560 aaPredicted RBP1.16□□□□□ -2.22
VAM6YDL077C VPS5Q92331 675 aa1.16□□□□□ -2.22
VAM6YDL077C POM152P39685 1337 aa1.16□□□□□ -2.22
VAM6YDL077C TEF1P02994 458 aaKnown RBP1.15□□□□□ -2.22
VAM6YDL077C SUP35P05453 685 aaKnown RBP1.15□□□□□ -2.22
VAM6YDL077C RPS19AP07280 144 aaKnown RBP1.15□□□□□ -2.22
VAM6YDL077C RPS19BP07281 144 aaPredicted RBP1.15□□□□□ -2.22
VAM6YDL077C TUB3P09734 445 aaKnown RBP1.15□□□□□ -2.22
VAM6YDL077C KRS1P15180 591 aaKnown RBP1.15□□□□□ -2.22
VAM6YDL077C PHO13P19881 312 aa1.15□□□□□ -2.22
VAM6YDL077C URA4P20051 364 aa1.15□□□□□ -2.22
VAM6YDL077C VPS34P22543 875 aa1.15□□□□□ -2.22
VAM6YDL077C MSH2P25847 964 aa1.15□□□□□ -2.22
VAM6YDL077C HXT1P32465 570 aa1.15□□□□□ -2.22
VAM6YDL077C PDB1P32473 366 aaKnown RBP1.15□□□□□ -2.22
VAM6YDL077C GDA1P32621 518 aa1.15□□□□□ -2.22
VAM6YDL077C AFG2P32794 780 aa1.15□□□□□ -2.22
VAM6YDL077C LIP5P32875 414 aa1.15□□□□□ -2.22
VAM6YDL077C SMY2P32909 740 aaKnown RBP1.15□□□□□ -2.22
VAM6YDL077C CSE1P33307 960 aa1.15□□□□□ -2.22
VAM6YDL077C RCN1P36054 211 aa1.15□□□□□ -2.22
VAM6YDL077C JNM1P36224 373 aa1.15□□□□□ -2.22
VAM6YDL077C ATP3P38077 311 aaKnown RBP1.15□□□□□ -2.22
VAM6YDL077C YHL017WP38745 532 aa1.15□□□□□ -2.22
VAM6YDL077C NUP60P39705 539 aa1.15□□□□□ -2.22
VAM6YDL077C ULP2P40537 1034 aaPredicted RBP1.15□□□□□ -2.22
VAM6YDL077C IRR1P40541 1150 aa1.15□□□□□ -2.22
VAM6YDL077C MAD1P40957 749 aa1.15□□□□□ -2.22
VAM6YDL077C STB1P42845 420 aa1.15□□□□□ -2.22
VAM6YDL077C YFL034WP43564 1073 aa1.15□□□□□ -2.22
VAM6YDL077C ALB1P47019 175 aaPredicted RBP1.15□□□□□ -2.22
VAM6YDL077C MDV1P47025 714 aa1.15□□□□□ -2.22
VAM6YDL077C TRF5P48561 642 aaKnown RBP1.15□□□□□ -2.22
VAM6YDL077C GCV2P49095 1034 aa1.15□□□□□ -2.22
VAM6YDL077C SQS1P53866 767 aaKnown RBP1.15□□□□□ -2.22
VAM6YDL077C GIM3P53900 129 aa1.15□□□□□ -2.22
VAM6YDL077C FYV6P53913 173 aa1.15□□□□□ -2.22
VAM6YDL077C YNL058CP53947 316 aa1.15□□□□□ -2.22
VAM6YDL077C SFB2P53953 876 aa1.15□□□□□ -2.22
VAM6YDL077C EEB1Q02891 456 aa1.15□□□□□ -2.22
VAM6YDL077C HEH2Q03281 663 aa1.15□□□□□ -2.22
VAM6YDL077C SSQ1Q05931 657 aaPredicted RBP1.15□□□□□ -2.22
VAM6YDL077C PDR8Q06149 701 aa1.15□□□□□ -2.22
VAM6YDL077C RSC2Q06488 889 aa1.15□□□□□ -2.22
VAM6YDL077C HDA3Q06623 655 aa1.15□□□□□ -2.22
VAM6YDL077C ATG13Q06628 738 aa1.15□□□□□ -2.22
VAM6YDL077C MDM36Q06820 579 aa1.15□□□□□ -2.22
VAM6YDL077C ISA1Q07821 250 aaPredicted RBP1.15□□□□□ -2.22
VAM6YDL077C RRP6Q12149 733 aaKnown RBP1.15□□□□□ -2.22
VAM6YDL077C RMP1Q12530 201 aa1.15□□□□□ -2.22
VAM6YDL077C SPS1P08458 490 aa1.15□□□□□ -2.23
VAM6YDL077C ADH4P10127 382 aa1.15□□□□□ -2.23
VAM6YDL077C PGI1P12709 554 aaKnown RBP1.15□□□□□ -2.23
VAM6YDL077C YAP1P19880 650 aaKnown RBP1.15□□□□□ -2.23
VAM6YDL077C CKI1P20485 582 aa1.15□□□□□ -2.23
VAM6YDL077C OPI1P21957 404 aa1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 94.4 ms