RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W PEA2P40091 420 aa4.38□□□□□ -1.71
TSR1YDL060W ALR2P43553 858 aa4.38□□□□□ -1.71
TSR1YDL060W HRQ1Q05549 1077 aa4.38□□□□□ -1.71
TSR1YDL060W RIB2Q12362 591 aaKnown RBP4.38□□□□□ -1.71
TSR1YDL060W ADE8P04161 214 aa4.37□□□□□ -1.71
TSR1YDL060W SST2P11972 698 aaKnown RBP4.37□□□□□ -1.71
TSR1YDL060W PRE10P21242 288 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
TSR1YDL060W MEF1P25039 761 aa4.37□□□□□ -1.71
TSR1YDL060W FLR1P38124 548 aa4.37□□□□□ -1.71
TSR1YDL060W DJP1P40564 432 aa4.37□□□□□ -1.71
TSR1YDL060W IES1P43579 692 aa4.37□□□□□ -1.71
TSR1YDL060W PSP2P50109 593 aaKnown RBP4.37□□□□□ -1.71
TSR1YDL060W PEX14P53112 341 aa4.37□□□□□ -1.71
TSR1YDL060W UBX4P54730 416 aa4.37□□□□□ -1.71
TSR1YDL060W YPR196WQ06595 470 aa4.37□□□□□ -1.71
TSR1YDL060W PGI1P12709 554 aaKnown RBP4.36□□□□□ -1.71
TSR1YDL060W YCR015CP25616 317 aa4.36□□□□□ -1.71
TSR1YDL060W TOA1P32773 286 aa4.36□□□□□ -1.71
TSR1YDL060W MPT5P39016 859 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
TSR1YDL060W YDL124WQ07551 312 aaKnown RBP4.36□□□□□ -1.71
TSR1YDL060W MPH2P0CD99 609 aa4.36□□□□□ -1.71
TSR1YDL060W FUN30P31380 1131 aa4.36□□□□□ -1.71
TSR1YDL060W NFU1P32860 256 aa4.36□□□□□ -1.71
TSR1YDL060W DOM34P33309 386 aa4.36□□□□□ -1.71
TSR1YDL060W YAP1801P38856 637 aa4.36□□□□□ -1.71
TSR1YDL060W SDA1P53313 767 aaKnown RBP4.36□□□□□ -1.71
TSR1YDL060W SRT1Q03175 343 aa4.36□□□□□ -1.71
TSR1YDL060W DUS4Q06063 367 aa4.36□□□□□ -1.71
TSR1YDL060W YLR001CQ07895 862 aa4.36□□□□□ -1.71
TSR1YDL060W ERP4Q12450 207 aa4.36□□□□□ -1.71
TSR1YDL060W THO2P53552 1597 aaKnown RBP4.35□□□□□ -1.71
TSR1YDL060W PLC1P32383 869 aa4.35□□□□□ -1.71
TSR1YDL060W MNN4P36044 1178 aa4.35□□□□□ -1.71
TSR1YDL060W MND2P40577 368 aa4.35□□□□□ -1.71
TSR1YDL060W GCV2P49095 1034 aa4.35□□□□□ -1.71
TSR1YDL060W MTC3P53077 123 aa4.35□□□□□ -1.71
TSR1YDL060W CLU1Q03690 1277 aaKnown RBP4.35□□□□□ -1.71
TSR1YDL060W YCF1P39109 1515 aaKnown RBP4.35□□□□□ -1.71
TSR1YDL060W PRP9P19736 530 aaKnown RBP4.35□□□□□ -1.71
TSR1YDL060W TFC4P33339 1025 aa4.35□□□□□ -1.71
TSR1YDL060W YKL151CP36059 337 aa4.35□□□□□ -1.71
TSR1YDL060W CCC2P38995 1004 aa4.35□□□□□ -1.71
TSR1YDL060W RPS0BP46654 252 aaKnown RBP4.35□□□□□ -1.71
TSR1YDL060W SPC105P53148 917 aa4.35□□□□□ -1.71
TSR1YDL060W YGR012WP53206 393 aa4.35□□□□□ -1.71
TSR1YDL060W YLR419WQ06698 1435 aaKnown RBP4.35□□□□□ -1.71
TSR1YDL060W EMC1P25574 760 aa4.34□□□□□ -1.71
TSR1YDL060W CDC20P26309 610 aa4.34□□□□□ -1.71
TSR1YDL060W TYS1P36421 394 aaKnown RBP4.34□□□□□ -1.71
TSR1YDL060W TAF1P46677 1066 aa4.34□□□□□ -1.71
TSR1YDL060W PIP2P52960 996 aa4.34□□□□□ -1.71
TSR1YDL060W TPO1Q07824 586 aa4.34□□□□□ -1.71
TSR1YDL060W XYL2Q07993 356 aa4.34□□□□□ -1.71
TSR1YDL060W HSF1P10961 833 aa4.34□□□□□ -1.72
TSR1YDL060W ECM21P38167 1117 aaKnown RBP4.34□□□□□ -1.72
TSR1YDL060W DSS1P39112 969 aa4.34□□□□□ -1.72
TSR1YDL060W HOS4P40480 1083 aa4.34□□□□□ -1.72
TSR1YDL060W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.34□□□□□ -1.72not detected
TSR1YDL060W TRE2Q08693 809 aa4.34□□□□□ -1.72
TSR1YDL060W MDM12Q92328 271 aa4.34□□□□□ -1.72
TSR1YDL060W ESP1Q03018 1630 aa4.33□□□□□ -1.72
TSR1YDL060W GAL1P04385 528 aa4.33□□□□□ -1.72
TSR1YDL060W CDC12P32468 407 aaKnown RBP4.33□□□□□ -1.72
TSR1YDL060W SHM2P37291 469 aaKnown RBP4.33□□□□□ -1.72
TSR1YDL060W YRO2P38079 344 aa4.33□□□□□ -1.72
TSR1YDL060W GUS1P46655 708 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
TSR1YDL060W MDM1Q01846 1127 aa4.33□□□□□ -1.72
TSR1YDL060W MET14Q02196 202 aa4.33□□□□□ -1.72
TSR1YDL060W TOP2P06786 1428 aaKnown RBP4.33□□□□□ -1.72
TSR1YDL060W TOP3P13099 656 aa4.33□□□□□ -1.72
TSR1YDL060W RPC82P32349 654 aa4.33□□□□□ -1.72
TSR1YDL060W SRP101P32916 621 aa4.33□□□□□ -1.72
TSR1YDL060W GIC1P38785 314 aa4.33□□□□□ -1.72
TSR1YDL060W MCM6P53091 1017 aaKnown RBP4.33□□□□□ -1.72
TSR1YDL060W YAP6Q03935 383 aa4.33□□□□□ -1.72
TSR1YDL060W HBN1Q96VH4 193 aa4.33□□□□□ -1.72
TSR1YDL060W MRS6P32864 603 aaKnown RBP4.32□□□□□ -1.72
TSR1YDL060W TRZ1P36159 838 aaPredicted RBP4.32□□□□□ -1.72
TSR1YDL060W EXO84P38261 753 aa4.32□□□□□ -1.72
TSR1YDL060W YER158CP40095 573 aa4.32□□□□□ -1.72
TSR1YDL060W RAD26P40352 1085 aa4.32□□□□□ -1.72
TSR1YDL060W VPS62P53285 467 aa4.32□□□□□ -1.72
TSR1YDL060W VPS30Q02948 557 aa4.32□□□□□ -1.72
TSR1YDL060W NOP12Q08208 459 aaKnown RBP4.32□□□□□ -1.72
TSR1YDL060W RRI2Q12348 645 aa4.32□□□□□ -1.72
TSR1YDL060W SWR1Q05471 1514 aa4.32□□□□□ -1.72
TSR1YDL060W VBA3P25594 458 aa4.32□□□□□ -1.72
TSR1YDL060W GYP7P48365 746 aa4.32□□□□□ -1.72
TSR1YDL060W MNN10P50108 393 aaKnown RBP4.32□□□□□ -1.72
TSR1YDL060W HFD1Q04458 532 aa4.32□□□□□ -1.72
TSR1YDL060W YLR224WQ05947 369 aa4.32□□□□□ -1.72
TSR1YDL060W TMA10Q06177 86 aa4.32□□□□□ -1.72
TSR1YDL060W HMI1Q12039 706 aa4.32□□□□□ -1.72
TSR1YDL060W SIN3P22579 1536 aa4.31□□□□□ -1.72
TSR1YDL060W TOM70P07213 617 aaKnown RBP4.31□□□□□ -1.72
TSR1YDL060W SSH4P32343 579 aa4.31□□□□□ -1.72
TSR1YDL060W HBS1P32769 611 aaKnown RBP4.31□□□□□ -1.72
TSR1YDL060W MGS1P40151 587 aa4.31□□□□□ -1.72
TSR1YDL060W MET12P46151 657 aa4.31□□□□□ -1.72
TSR1YDL060W MTQ2Q03920 221 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms