RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C VPS25P47142 202 aa1.65□□□□□ -2.14
MSH3YCR092C UBP3Q01477 912 aaKnown RBP RIP-Chip data1.65□□□□□ -2.14not detected
MSH3YCR092C TMA64Q04600 565 aaKnown RBP1.65□□□□□ -2.14
MSH3YCR092C HDA3Q06623 655 aa1.65□□□□□ -2.14
MSH3YCR092C YOL024WQ08172 172 aa1.65□□□□□ -2.14
MSH3YCR092C SGT2Q12118 346 aaKnown RBP1.65□□□□□ -2.14
MSH3YCR092C PCK1P10963 549 aa1.65□□□□□ -2.15
MSH3YCR092C SUP45P12385 437 aaKnown RBP1.65□□□□□ -2.15
MSH3YCR092C REV1P12689 985 aa1.65□□□□□ -2.15
MSH3YCR092C SUV3P32580 737 aa1.65□□□□□ -2.15
MSH3YCR092C TTI1P36097 1038 aa1.65□□□□□ -2.15
MSH3YCR092C TAF1P46677 1066 aa1.65□□□□□ -2.15
MSH3YCR092C AIM23P47015 356 aa1.65□□□□□ -2.15
MSH3YCR092C CLU1Q03690 1277 aaKnown RBP1.65□□□□□ -2.15
MSH3YCR092C YMR321CQ04898 105 aa1.65□□□□□ -2.15
MSH3YCR092C INM2Q05533 292 aa1.65□□□□□ -2.15
MSH3YCR092C PUN1Q06991 263 aa1.65□□□□□ -2.15
MSH3YCR092C YDL144CQ07589 356 aa1.65□□□□□ -2.15
MSH3YCR092C RRD2Q12461 358 aa1.65□□□□□ -2.15
MSH3YCR092C LAA1P39526 2014 aa1.65□□□□□ -2.15
MSH3YCR092C MET6P05694 767 aaKnown RBP1.65□□□□□ -2.15
MSH3YCR092C NOT3P06102 836 aaKnown RBP1.65□□□□□ -2.15
MSH3YCR092C NAT1P12945 854 aaKnown RBP1.65□□□□□ -2.15
MSH3YCR092C GLN3P18494 730 aa1.65□□□□□ -2.15
MSH3YCR092C KGD2P19262 463 aaPredicted RBP1.65□□□□□ -2.15
MSH3YCR092C SRP54P20424 541 aaKnown RBP1.65□□□□□ -2.15
MSH3YCR092C MAK31P23059 88 aa1.65□□□□□ -2.15
MSH3YCR092C COT1P32798 439 aa1.65□□□□□ -2.15
MSH3YCR092C KAE1P36132 386 aa1.65□□□□□ -2.15
MSH3YCR092C POL12P38121 705 aaPredicted RBP1.65□□□□□ -2.15
MSH3YCR092C YHL050CP38721 697 aa1.65□□□□□ -2.15
MSH3YCR092C CTM1P38818 585 aa1.65□□□□□ -2.15
MSH3YCR092C FIS1P40515 155 aa1.65□□□□□ -2.15
MSH3YCR092C GPD2P41911 440 aaKnown RBP1.65□□□□□ -2.15
MSH3YCR092C DAS1P47005 663 aa1.65□□□□□ -2.15
MSH3YCR092C YGL138CP53122 345 aa1.65□□□□□ -2.15
MSH3YCR092C YGR250CP53316 781 aaKnown RBP1.65□□□□□ -2.15
MSH3YCR092C RTC4P53850 401 aa1.65□□□□□ -2.15
MSH3YCR092C RPT6Q01939 405 aaKnown RBP1.65□□□□□ -2.15
MSH3YCR092C VPS64Q03944 604 aa1.65□□□□□ -2.15
MSH3YCR092C CSI1Q04368 295 aa1.65□□□□□ -2.15
MSH3YCR092C YPQ2Q06328 317 aa1.65□□□□□ -2.15
MSH3YCR092C ESC2Q06340 456 aa1.65□□□□□ -2.15
MSH3YCR092C AVO1Q08236 1176 aa1.65□□□□□ -2.15
MSH3YCR092C Q0182Q9ZZW1 134 aa1.65□□□□□ -2.15
MSH3YCR092C GLT1Q12680 2145 aaKnown RBP1.64□□□□□ -2.15
MSH3YCR092C MDM35O60200 86 aa1.64□□□□□ -2.15
MSH3YCR092C RPS31P05759 152 aaKnown RBP1.64□□□□□ -2.15
MSH3YCR092C SRS2P12954 1174 aa1.64□□□□□ -2.15
MSH3YCR092C SUI2P20459 304 aaKnown RBP1.64□□□□□ -2.15
MSH3YCR092C YCK2P23292 546 aaKnown RBP1.64□□□□□ -2.15
MSH3YCR092C PDC6P26263 563 aaKnown RBP1.64□□□□□ -2.15
MSH3YCR092C ANP1P32629 500 aa1.64□□□□□ -2.15
MSH3YCR092C TMT1P32643 299 aa1.64□□□□□ -2.15
MSH3YCR092C SWE1P32944 819 aa1.64□□□□□ -2.15
MSH3YCR092C AAP1P37898 856 aaKnown RBP1.64□□□□□ -2.15
MSH3YCR092C ATG12P38316 186 aa1.64□□□□□ -2.15
MSH3YCR092C YHL026CP38740 315 aa1.64□□□□□ -2.15
MSH3YCR092C FYV10P40492 516 aa1.64□□□□□ -2.15
MSH3YCR092C FLC3P53121 802 aa1.64□□□□□ -2.15
MSH3YCR092C DON1Q05610 365 aa1.64□□□□□ -2.15
MSH3YCR092C DUS4Q06063 367 aa1.64□□□□□ -2.15
MSH3YCR092C MRI1Q06489 411 aaKnown RBP1.64□□□□□ -2.15
MSH3YCR092C RLP24Q07915 199 aaKnown RBP1.64□□□□□ -2.15
MSH3YCR092C SMC5Q08204 1093 aa1.64□□□□□ -2.15
MSH3YCR092C ENO2P00925 437 aaKnown RBP1.64□□□□□ -2.15
MSH3YCR092C CIT2P08679 460 aa1.64□□□□□ -2.15
MSH3YCR092C PYC1P11154 1178 aaKnown RBP1.64□□□□□ -2.15
MSH3YCR092C GFA1P14742 717 aaKnown RBP1.64□□□□□ -2.15
MSH3YCR092C APE1P14904 514 aa1.64□□□□□ -2.15
MSH3YCR092C PGS1P25578 521 aa1.64□□□□□ -2.15
MSH3YCR092C URK1P27515 501 aa1.64□□□□□ -2.15
MSH3YCR092C KNS1P32350 737 aaPredicted RBP1.64□□□□□ -2.15
MSH3YCR092C SKG6P32900 734 aaPredicted RBP1.64□□□□□ -2.15
MSH3YCR092C UBX7P38349 436 aa1.64□□□□□ -2.15
MSH3YCR092C UME6P39001 836 aa1.64□□□□□ -2.15
MSH3YCR092C DAK2P43550 591 aa1.64□□□□□ -2.15
MSH3YCR092C TDA7P53882 636 aaPredicted RBP1.64□□□□□ -2.15
MSH3YCR092C BUL2Q03758 920 aaKnown RBP1.64□□□□□ -2.15
MSH3YCR092C GRX8Q05926 109 aa1.64□□□□□ -2.15
MSH3YCR092C CBC2Q08920 208 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
MSH3YCR092C TIP41Q12199 356 aa1.64□□□□□ -2.15
MSH3YCR092C YDR061WQ12298 539 aa1.64□□□□□ -2.15
MSH3YCR092C RRI2Q12348 645 aa1.64□□□□□ -2.15
MSH3YCR092C RPS3P05750 240 aaKnown RBP1.63□□□□□ -2.15
MSH3YCR092C LEU1P07264 779 aaKnown RBP1.63□□□□□ -2.15
MSH3YCR092C SWI5P08153 709 aa1.63□□□□□ -2.15
MSH3YCR092C TSA1P34760 196 aaKnown RBP1.63□□□□□ -2.15
MSH3YCR092C TIF5P38431 405 aaKnown RBP1.63□□□□□ -2.15
MSH3YCR092C YHL017WP38745 532 aa1.63□□□□□ -2.15
MSH3YCR092C CRP1P38845 465 aaKnown RBP1.63□□□□□ -2.15
MSH3YCR092C CCT6P39079 546 aa1.63□□□□□ -2.15
MSH3YCR092C FYV8P46949 817 aaKnown RBP1.63□□□□□ -2.15
MSH3YCR092C RIM21P48565 533 aa1.63□□□□□ -2.15
MSH3YCR092C SSL1Q04673 461 aaPredicted RBP1.63□□□□□ -2.15
MSH3YCR092C AIM32Q04689 311 aa1.63□□□□□ -2.15
MSH3YCR092C COQ9Q05779 260 aa1.63□□□□□ -2.15
MSH3YCR092C YDR215CQ12240 137 aa1.63□□□□□ -2.15
MSH3YCR092C SPO21Q12411 609 aa1.63□□□□□ -2.15
MSH3YCR092C YOL098CQ12496 1037 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms