RNA–Protein interactions for RNA: YCL051W

LRE1, Transcript of Protein involved in control of cell wall structure and stress response, yeast

Gene LRE1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRE1	YCL051W	RAI1	P53063	387 aa	Known RBP	2.36	□□□□□ -2.03
LRE1	YCL051W	INO1	P11986	533 aa		2.35	□□□□□ -2.03
LRE1	YCL051W	CAF20	P12962	161 aa	Known RBP	2.35	□□□□□ -2.03
LRE1	YCL051W	LYP1	P32487	611 aa		2.35	□□□□□ -2.03
LRE1	YCL051W	RGT1	P32862	1170 aa		2.35	□□□□□ -2.03
LRE1	YCL051W	MOT2	P34909	587 aa	Known RBP	2.35	□□□□□ -2.03
LRE1	YCL051W	MNN4	P36044	1178 aa		2.35	□□□□□ -2.03
LRE1	YCL051W	TRM11	Q12463	433 aa		2.35	□□□□□ -2.03
LRE1	YCL051W	PDR12	Q02785	1511 aa		2.35	□□□□□ -2.03
LRE1	YCL051W	PDR15	Q04182	1529 aa	Known RBP	2.35	□□□□□ -2.03
LRE1	YCL051W	USO1	P25386	1790 aa		2.35	□□□□□ -2.03
LRE1	YCL051W	TRP2	P00899	507 aa	Known RBP	2.34	□□□□□ -2.03
LRE1	YCL051W	FBP1	P09201	348 aa		2.34	□□□□□ -2.03
LRE1	YCL051W	TUB3	P09734	445 aa	Known RBP	2.34	□□□□□ -2.03
LRE1	YCL051W	IPL1	P38991	367 aa		2.34	□□□□□ -2.03
LRE1	YCL051W	SAH1	P39954	449 aa	Known RBP	2.34	□□□□□ -2.03
LRE1	YCL051W	NUG1	P40010	520 aa	Known RBP	2.34	□□□□□ -2.03
LRE1	YCL051W	YGL176C	P46945	554 aa		2.34	□□□□□ -2.03
LRE1	YCL051W	MRI1	Q06489	411 aa	Known RBP	2.34	□□□□□ -2.03
LRE1	YCL051W	RKM4	Q12504	494 aa		2.34	□□□□□ -2.03
LRE1	YCL051W	BUD3	P25558	1636 aa		2.34	□□□□□ -2.04
LRE1	YCL051W	NUP157	P40064	1391 aa	Known RBP	2.34	□□□□□ -2.04
LRE1	YCL051W	SLD2	P34252	453 aa		2.33	□□□□□ -2.04
LRE1	YCL051W	MET10	P39692	1035 aa		2.33	□□□□□ -2.04
LRE1	YCL051W	MUP1	P50276	574 aa		2.33	□□□□□ -2.04
LRE1	YCL051W	SSL1	Q04673	461 aa	Predicted RBP	2.33	□□□□□ -2.04
LRE1	YCL051W	TMA46	Q12000	345 aa	Known RBP	2.33	□□□□□ -2.04
LRE1	YCL051W	ARO1	P08566	1588 aa	Known RBP	2.33	□□□□□ -2.04
LRE1	YCL051W	SPT7	P35177	1332 aa		2.33	□□□□□ -2.04
LRE1	YCL051W	YKL107W	P34251	309 aa		2.33	□□□□□ -2.04
LRE1	YCL051W	YBR053C	P38235	358 aa		2.33	□□□□□ -2.04
LRE1	YCL051W	MGE1	P38523	228 aa		2.33	□□□□□ -2.04
LRE1	YCL051W	YJL163C	P46996	555 aa		2.33	□□□□□ -2.04
LRE1	YCL051W	MRPS35	P53292	345 aa		2.33	□□□□□ -2.04
LRE1	YCL051W	RIA1	P53893	1110 aa		2.33	□□□□□ -2.04
LRE1	YCL051W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	2.33	□□□□□ -2.04	not detected
LRE1	YCL051W	STH1	P32597	1359 aa		2.32	□□□□□ -2.04
LRE1	YCL051W	YTA7	P40340	1379 aa		2.32	□□□□□ -2.04
LRE1	YCL051W	FPR3	P38911	411 aa	Known RBP	2.32	□□□□□ -2.04
LRE1	YCL051W	SDP1	P40479	209 aa		2.32	□□□□□ -2.04
LRE1	YCL051W	FKH2	P41813	862 aa		2.32	□□□□□ -2.04
LRE1	YCL051W	STB2	P46679	850 aa		2.32	□□□□□ -2.04
LRE1	YCL051W	APM1	Q00776	475 aa	Predicted RBP	2.32	□□□□□ -2.04
LRE1	YCL051W	RLP24	Q07915	199 aa	Known RBP	2.32	□□□□□ -2.04
LRE1	YCL051W	CLC1	P17891	233 aa		2.31	□□□□□ -2.04
LRE1	YCL051W	CDC12	P32468	407 aa	Known RBP	2.31	□□□□□ -2.04
LRE1	YCL051W	ORC2	P32833	620 aa		2.31	□□□□□ -2.04
LRE1	YCL051W	ENP1	P38333	483 aa	Known RBP	2.31	□□□□□ -2.04
LRE1	YCL051W	GYP7	P48365	746 aa		2.31	□□□□□ -2.04
LRE1	YCL051W	BPL1	P48445	690 aa	Predicted RBP	2.31	□□□□□ -2.04
LRE1	YCL051W	RIM13	Q03792	727 aa		2.31	□□□□□ -2.04
LRE1	YCL051W	SEC3	P33332	1336 aa	Known RBP	2.31	□□□□□ -2.04
LRE1	YCL051W	RNA1	P11745	407 aa	Known RBP	2.31	□□□□□ -2.04
LRE1	YCL051W	MCM2	P29469	868 aa		2.31	□□□□□ -2.04
LRE1	YCL051W	DUT1	P33317	147 aa		2.31	□□□□□ -2.04
LRE1	YCL051W	TYW3	P53177	273 aa		2.31	□□□□□ -2.04
LRE1	YCL051W	YGR053C	P53234	283 aa		2.31	□□□□□ -2.04
LRE1	YCL051W	SEN54	Q02825	467 aa	Predicted RBP	2.31	□□□□□ -2.04
LRE1	YCL051W	EEB1	Q02891	456 aa		2.31	□□□□□ -2.04
LRE1	YCL051W	CRR1	Q05790	422 aa		2.31	□□□□□ -2.04
LRE1	YCL051W	YPR196W	Q06595	470 aa		2.31	□□□□□ -2.04
LRE1	YCL051W	NOT3	P06102	836 aa	Known RBP	2.3	□□□□□ -2.04
LRE1	YCL051W	SPO11	P23179	398 aa		2.3	□□□□□ -2.04
LRE1	YCL051W	DMC1	P25453	334 aa		2.3	□□□□□ -2.04
LRE1	YCL051W	EMP70	P32802	667 aa		2.3	□□□□□ -2.04
LRE1	YCL051W	STE13	P33894	931 aa		2.3	□□□□□ -2.04
LRE1	YCL051W	RPP1	P38786	293 aa		2.3	□□□□□ -2.04
LRE1	YCL051W	POL32	P47110	350 aa		2.3	□□□□□ -2.04
LRE1	YCL051W	FPR4	Q06205	392 aa	Predicted RBP	2.3	□□□□□ -2.04
LRE1	YCL051W	ESF1	Q06344	628 aa	Known RBP	2.3	□□□□□ -2.04
LRE1	YCL051W	SWM1	Q12379	170 aa		2.3	□□□□□ -2.04
LRE1	YCL051W	YBT1	P32386	1661 aa		2.3	□□□□□ -2.04
LRE1	YCL051W	TY3B-G	Q99315	1547 aa		2.29	□□□□□ -2.04
LRE1	YCL051W	QCR6	P00127	147 aa		2.29	□□□□□ -2.04
LRE1	YCL051W	CTF8	P38877	133 aa		2.29	□□□□□ -2.04
LRE1	YCL051W	BNA3	P47039	444 aa	Known RBP	2.29	□□□□□ -2.04
LRE1	YCL051W	YJR107W	P47145	328 aa		2.29	□□□□□ -2.04
LRE1	YCL051W	SRP1	Q02821	542 aa	Known RBP	2.29	□□□□□ -2.04
LRE1	YCL051W	TDA9	Q04545	1251 aa		2.29	□□□□□ -2.04
LRE1	YCL051W	SPR28	Q04921	423 aa		2.29	□□□□□ -2.04
LRE1	YCL051W	PRP4	P20053	465 aa	Known RBP	2.28	□□□□□ -2.04
LRE1	YCL051W	IME2	P32581	645 aa		2.28	□□□□□ -2.04
LRE1	YCL051W	TSL1	P38427	1098 aa	Known RBP	2.28	□□□□□ -2.04
LRE1	YCL051W	YKE2	P52553	114 aa		2.28	□□□□□ -2.04
LRE1	YCL051W	SEG1	Q04279	960 aa		2.28	□□□□□ -2.04
LRE1	YCL051W	TAF3	Q12297	353 aa		2.28	□□□□□ -2.04
LRE1	YCL051W	RGT2	Q12300	763 aa		2.28	□□□□□ -2.04
LRE1	YCL051W	YSP2	Q06681	1438 aa		2.28	□□□□□ -2.04
LRE1	YCL051W	RPD3	P32561	433 aa		2.28	□□□□□ -2.04
LRE1	YCL051W	YKR078W	P36158	585 aa	Known RBP	2.28	□□□□□ -2.04
LRE1	YCL051W	FUN12	P39730	1002 aa	Known RBP	2.28	□□□□□ -2.04
LRE1	YCL051W	AMA1	P50082	593 aa		2.28	□□□□□ -2.04
LRE1	YCL051W	DAM1	P53267	343 aa		2.28	□□□□□ -2.04
LRE1	YCL051W	RMD1	Q03441	430 aa		2.28	□□□□□ -2.04
LRE1	YCL051W	GRX3	Q03835	250 aa		2.28	□□□□□ -2.04
LRE1	YCL051W	YLR225C	Q05948	407 aa	Known RBP	2.28	□□□□□ -2.04
LRE1	YCL051W	SGO1	Q08490	590 aa		2.28	□□□□□ -2.04
LRE1	YCL051W	IRC13	Q08630	104 aa		2.28	□□□□□ -2.04
LRE1	YCL051W	YBR238C	P38330	731 aa	Known RBP	2.27	□□□□□ -2.05
LRE1	YCL051W	CBR1	P38626	284 aa	Known RBP	2.27	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms