RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C YER158CP40095 573 aa1.8□□□□□ -2.12
YAR009CYAR009C GYP7P48365 746 aa1.8□□□□□ -2.12
YAR009CYAR009C PBP1P53297 722 aaKnown RBP1.8□□□□□ -2.12
YAR009CYAR009C ROT1Q03691 256 aa1.8□□□□□ -2.12
YAR009CYAR009C LCD1Q04377 747 aa1.8□□□□□ -2.12
YAR009CYAR009C XYL2Q07993 356 aa1.8□□□□□ -2.12
YAR009CYAR009C YPR071WQ12346 211 aa1.8□□□□□ -2.12
YAR009CYAR009C ENA1P13587 1091 aa1.8□□□□□ -2.12
YAR009CYAR009C GAL11P19659 1081 aa1.8□□□□□ -2.12
YAR009CYAR009C SRM1P21827 482 aa1.8□□□□□ -2.12
YAR009CYAR009C CDC48P25694 835 aaKnown RBP1.8□□□□□ -2.12
YAR009CYAR009C RPC82P32349 654 aa1.8□□□□□ -2.12
YAR009CYAR009C YKR078WP36158 585 aaKnown RBP1.8□□□□□ -2.12
YAR009CYAR009C ECM21P38167 1117 aaKnown RBP1.8□□□□□ -2.12
YAR009CYAR009C CHZ1P40019 153 aaPredicted RBP1.8□□□□□ -2.12
YAR009CYAR009C ZRG8P40021 1076 aa1.8□□□□□ -2.12
YAR009CYAR009C CCM1P48237 864 aaPredicted RBP1.8□□□□□ -2.12
YAR009CYAR009C ENA2Q01896 1091 aa1.8□□□□□ -2.12
YAR009CYAR009C RPN4Q03465 531 aa1.8□□□□□ -2.12
YAR009CYAR009C ENA5Q12691 1091 aa1.8□□□□□ -2.12
YAR009CYAR009C HBN1Q96VH4 193 aa1.8□□□□□ -2.12
YAR009CYAR009C CAN1P04817 590 aa1.8□□□□□ -2.12
YAR009CYAR009C RNQ1P25367 405 aa1.8□□□□□ -2.12
YAR009CYAR009C DOM34P33309 386 aa1.8□□□□□ -2.12
YAR009CYAR009C TSL1P38427 1098 aaKnown RBP1.8□□□□□ -2.12
YAR009CYAR009C MEF2P39677 819 aa1.8□□□□□ -2.12
YAR009CYAR009C AIM21P40563 679 aa1.8□□□□□ -2.12
YAR009CYAR009C SFB2P53953 876 aa1.8□□□□□ -2.12
YAR009CYAR009C NPL3Q01560 414 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
YAR009CYAR009C TAF8Q03750 510 aa1.8□□□□□ -2.12
YAR009CYAR009C RPS13P05756 151 aaKnown RBP1.79□□□□□ -2.12
YAR009CYAR009C NPP1P25353 742 aa1.79□□□□□ -2.12
YAR009CYAR009C ELM1P32801 640 aa1.79□□□□□ -2.12
YAR009CYAR009C REC104P33323 182 aa1.79□□□□□ -2.12
YAR009CYAR009C TSA1P34760 196 aaKnown RBP1.79□□□□□ -2.12
YAR009CYAR009C AIM3P38266 947 aaKnown RBP1.79□□□□□ -2.12
YAR009CYAR009C OSW7P43611 510 aa1.79□□□□□ -2.12
YAR009CYAR009C PSP2P50109 593 aaKnown RBP1.79□□□□□ -2.12
YAR009CYAR009C YGR012WP53206 393 aa1.79□□□□□ -2.12
YAR009CYAR009C GTF1P53260 183 aaPredicted RBP1.79□□□□□ -2.12
YAR009CYAR009C CDA2Q06703 312 aa1.79□□□□□ -2.12
YAR009CYAR009C SLM3Q12093 417 aa1.79□□□□□ -2.12
YAR009CYAR009C TOM70P07213 617 aaKnown RBP1.79□□□□□ -2.12
YAR009CYAR009C AFR1P33304 620 aa1.79□□□□□ -2.12
YAR009CYAR009C PET10P36139 283 aa1.79□□□□□ -2.12
YAR009CYAR009C POA1P38218 177 aa1.79□□□□□ -2.12
YAR009CYAR009C NPP2P39997 493 aa1.79□□□□□ -2.12
YAR009CYAR009C KIN4Q01919 800 aa1.79□□□□□ -2.12
YAR009CYAR009C PLB2Q03674 706 aa1.79□□□□□ -2.12
YAR009CYAR009C FPR4Q06205 392 aaPredicted RBP1.79□□□□□ -2.12
YAR009CYAR009C RXT3Q07458 294 aa1.79□□□□□ -2.12
YAR009CYAR009C ECM29P38737 1868 aa1.79□□□□□ -2.12
YAR009CYAR009C SOD2P00447 233 aa1.79□□□□□ -2.12
YAR009CYAR009C RPP2AP05319 106 aaKnown RBP1.79□□□□□ -2.12
YAR009CYAR009C HSF1P10961 833 aa1.79□□□□□ -2.12
YAR009CYAR009C MSD1P15179 658 aaKnown RBP1.79□□□□□ -2.12
YAR009CYAR009C SRP101P32916 621 aa1.79□□□□□ -2.12
YAR009CYAR009C TOK1P40310 691 aa1.79□□□□□ -2.12
YAR009CYAR009C MND2P40577 368 aa1.79□□□□□ -2.12
YAR009CYAR009C SPT20P50875 604 aa1.79□□□□□ -2.12
YAR009CYAR009C RIM8P53179 542 aa1.79□□□□□ -2.12
YAR009CYAR009C GCN5Q03330 439 aa1.79□□□□□ -2.12
YAR009CYAR009C YPL277CQ08989 487 aa1.79□□□□□ -2.12
YAR009CYAR009C TOP3P13099 656 aa1.78□□□□□ -2.12
YAR009CYAR009C PRP6P19735 899 aaPredicted RBP1.78□□□□□ -2.12
YAR009CYAR009C RFA1P22336 621 aaKnown RBP1.78□□□□□ -2.12
YAR009CYAR009C PBP2P38151 413 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
YAR009CYAR009C IRC24P40580 263 aa1.78□□□□□ -2.12
YAR009CYAR009C UBP6P43593 499 aaKnown RBP1.78□□□□□ -2.12
YAR009CYAR009C VPS30Q02948 557 aa1.78□□□□□ -2.12
YAR009CYAR009C BUL2Q03758 920 aaKnown RBP1.78□□□□□ -2.12
YAR009CYAR009C GPB1Q08886 897 aa1.78□□□□□ -2.12
YAR009CYAR009C BET3P36149 193 aa1.78□□□□□ -2.12
YAR009CYAR009C BUD6P41697 788 aa1.78□□□□□ -2.12
YAR009CYAR009C GCV2P49095 1034 aa1.78□□□□□ -2.12
YAR009CYAR009C YKE2P52553 114 aa1.78□□□□□ -2.12
YAR009CYAR009C CDA1Q06702 301 aa1.78□□□□□ -2.12
YAR009CYAR009C NOT3P06102 836 aaKnown RBP1.78□□□□□ -2.13
YAR009CYAR009C TOD6P34219 525 aa1.78□□□□□ -2.13
YAR009CYAR009C ATG19P35193 415 aa1.78□□□□□ -2.13
YAR009CYAR009C YBR238CP38330 731 aaKnown RBP1.78□□□□□ -2.13
YAR009CYAR009C UBP5P39944 805 aa1.78□□□□□ -2.13
YAR009CYAR009C NIT3P49954 291 aa1.78□□□□□ -2.13
YAR009CYAR009C RAI1P53063 387 aaKnown RBP1.78□□□□□ -2.13
YAR009CYAR009C DUS4Q06063 367 aa1.78□□□□□ -2.13
YAR009CYAR009C ACK1Q07622 623 aaPredicted RBP1.78□□□□□ -2.13
YAR009CYAR009C TPO1Q07824 586 aa1.78□□□□□ -2.13
YAR009CYAR009C RPO41P13433 1351 aaKnown RBP1.77□□□□□ -2.13
YAR009CYAR009C TIM23P32897 222 aa1.77□□□□□ -2.13
YAR009CYAR009C NUP82P40368 713 aa1.77□□□□□ -2.13
YAR009CYAR009C MET12P46151 657 aa1.77□□□□□ -2.13
YAR009CYAR009C RTA1P53047 317 aa1.77□□□□□ -2.13
YAR009CYAR009C YDR132CQ03900 495 aa1.77□□□□□ -2.13
YAR009CYAR009C PPM2Q08282 695 aa1.77□□□□□ -2.13
YAR009CYAR009C BUD21Q08492 214 aaPredicted RBP1.77□□□□□ -2.13
YAR009CYAR009C YLR125WQ12138 136 aa1.77□□□□□ -2.13
YAR009CYAR009C YLR358CO13565 187 aa1.77□□□□□ -2.13
YAR009CYAR009C CIT2P08679 460 aa1.77□□□□□ -2.13
YAR009CYAR009C MPH2P0CD99 609 aa1.77□□□□□ -2.13
YAR009CYAR009C PHO8P11491 566 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms