RNA–Protein interactions for RNA: ENST00000638237.1

NECAP1-210, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NECAP1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-210ENST00000638237 CASTP20810 708 aaKnown RBP10.35□□□□□ -0.75
NECAP1-210ENST00000638237 AK2P54819 239 aa10.35□□□□□ -0.75
NECAP1-210ENST00000638237 UBE2HP62256 183 aa10.35□□□□□ -0.75
NECAP1-210ENST00000638237 CCDC94Q9BW85 323 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-210ENST00000638237 SPTLC3Q9NUV7 552 aa10.35□□□□□ -0.75
NECAP1-210ENST00000638237 PRPF40BQ6NWY9 871 aaKnown RBP10.34□□□□□ -0.75
NECAP1-210ENST00000638237 FMNL2Q96PY5 1086 aa10.34□□□□□ -0.75
NECAP1-210ENST00000638237 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
NECAP1-210ENST00000638237 SHANK3Q9BYB0 1731 aa10.34□□□□□ -0.75
NECAP1-210ENST00000638237 ZSCAN22P10073 491 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-210ENST00000638237 ERC1Q8IUD2 1116 aa10.34□□□□□ -0.75
NECAP1-210ENST00000638237 TTC14Q96N46 770 aa10.34□□□□□ -0.75
NECAP1-210ENST00000638237 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.34□□□□□ -0.75
NECAP1-210ENST00000638237 CNPY2Q9Y2B0 182 aa10.34□□□□□ -0.75
NECAP1-210ENST00000638237 A0A0D9SFI3 127 aa10.33□□□□□ -0.76
NECAP1-210ENST00000638237 NBPF26B4DH59 902 aa10.33□□□□□ -0.76
NECAP1-210ENST00000638237 HCLS1P14317 486 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-210ENST00000638237 NMIQ13287 307 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-210ENST00000638237 NBPF14Q5TI25 921 aa10.33□□□□□ -0.76
NECAP1-210ENST00000638237 NBPF10Q6P3W6 841 aaKnown RBP10.33□□□□□ -0.76
NECAP1-210ENST00000638237 TTLL7Q6ZT98 887 aa10.33□□□□□ -0.76
NECAP1-210ENST00000638237 NBPF15Q8N660 670 aa10.33□□□□□ -0.76
NECAP1-210ENST00000638237 GPATCH3Q96I76 525 aa10.33□□□□□ -0.76
NECAP1-210ENST00000638237 TCEANC2Q96MN5 208 aa10.33□□□□□ -0.76
NECAP1-210ENST00000638237 ZNF830Q96NB3 372 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-210ENST00000638237 TAF6LQ9Y6J9 622 aa10.33□□□□□ -0.76
NECAP1-210ENST00000638237 PARP4Q9UKK3 1724 aaKnown RBP10.33□□□□□ -0.76
NECAP1-210ENST00000638237 ZNF335Q9H4Z2 1342 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-210ENST00000638237 STRCQ7RTU9 1775 aa10.33□□□□□ -0.76
NECAP1-210ENST00000638237 A0A087WZG4 1122 aa10.33□□□□□ -0.76
NECAP1-210ENST00000638237 STX6O43752 255 aa10.33□□□□□ -0.76
NECAP1-210ENST00000638237 KDM4AO75164 1064 aa10.33□□□□□ -0.76
NECAP1-210ENST00000638237 RUFY3Q7L099 469 aa10.33□□□□□ -0.76
NECAP1-210ENST00000638237 TTC12Q9H892 705 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-210ENST00000638237 CHMP3Q9Y3E7 222 aa10.33□□□□□ -0.76
NECAP1-210ENST00000638237 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-210ENST00000638237 ATP6V1DQ9Y5K8 247 aa10.33□□□□□ -0.76
NECAP1-210ENST00000638237 A1BGP04217 495 aa10.32□□□□□ -0.76
NECAP1-210ENST00000638237 SYT1P21579 422 aa10.32□□□□□ -0.76
NECAP1-210ENST00000638237 PTPN12Q05209 780 aaKnown RBP10.32□□□□□ -0.76
NECAP1-210ENST00000638237 JAKMIP1Q96N16 626 aaKnown RBP10.32□□□□□ -0.76
NECAP1-210ENST00000638237 FUCA2Q9BTY2 467 aa10.32□□□□□ -0.76
NECAP1-210ENST00000638237 DBNLQ9UJU6 430 aaKnown RBP10.32□□□□□ -0.76
NECAP1-210ENST00000638237 ZNF330Q9Y3S2 320 aaPredicted RBP10.32□□□□□ -0.76
NECAP1-210ENST00000638237 ABCA3Q99758 1704 aa10.32□□□□□ -0.76
NECAP1-210ENST00000638237 UBR2Q8IWV8 1755 aa10.32□□□□□ -0.76
NECAP1-210ENST00000638237 F13A1P00488 732 aa10.32□□□□□ -0.76
NECAP1-210ENST00000638237 TFCP2Q12800 502 aa10.32□□□□□ -0.76
NECAP1-210ENST00000638237 ZNF589Q86UQ0 364 aaPredicted RBP10.32□□□□□ -0.76
NECAP1-210ENST00000638237 EVI5LQ96CN4 794 aa10.32□□□□□ -0.76
NECAP1-210ENST00000638237 FSD1Q9BTV5 496 aa10.32□□□□□ -0.76
NECAP1-210ENST00000638237 ZBTB3Q9H5J0 574 aa10.32□□□□□ -0.76
NECAP1-210ENST00000638237 LIMCH1Q9UPQ0 1083 aa10.32□□□□□ -0.76
NECAP1-210ENST00000638237 CPDO75976 1380 aa10.32□□□□□ -0.76
NECAP1-210ENST00000638237 COL5A2P05997 1499 aaPredicted RBP10.31□□□□□ -0.76
NECAP1-210ENST00000638237 TJP1Q07157 1748 aa10.31□□□□□ -0.76
NECAP1-210ENST00000638237 NUP188Q5SRE5 1749 aa10.31□□□□□ -0.76
NECAP1-210ENST00000638237 ZNF710Q8N1W2 664 aa10.31□□□□□ -0.76
NECAP1-210ENST00000638237 MPNDQ8N594 471 aa10.31□□□□□ -0.76
NECAP1-210ENST00000638237 CCDC171Q6TFL3 1326 aa10.31□□□□□ -0.76
NECAP1-210ENST00000638237 WDR17Q8IZU2 1322 aa10.31□□□□□ -0.76
NECAP1-210ENST00000638237 TOGARAM1Q9Y4F4 1720 aa10.31□□□□□ -0.76
NECAP1-210ENST00000638237 KCNJ4P48050 445 aa10.31□□□□□ -0.76
NECAP1-210ENST00000638237 RFX5P48382 616 aaPredicted RBP10.31□□□□□ -0.76
NECAP1-210ENST00000638237 KIF3AQ9Y496 699 aa10.31□□□□□ -0.76
NECAP1-210ENST00000638237 RBM8AQ9Y5S9 174 aaKnown RBP10.31□□□□□ -0.76
NECAP1-210ENST00000638237 SLFNL1Q499Z3 407 aa10.3□□□□□ -0.76
NECAP1-210ENST00000638237 LMBR1LQ6UX01 489 aa10.3□□□□□ -0.76
NECAP1-210ENST00000638237 CCDC83Q8IWF9 413 aa10.3□□□□□ -0.76
NECAP1-210ENST00000638237 ZCRB1Q8TBF4 217 aaKnown RBP10.3□□□□□ -0.76
NECAP1-210ENST00000638237 ARID3AQ99856 593 aa10.3□□□□□ -0.76
NECAP1-210ENST00000638237 SMC3Q9UQE7 1217 aa10.3□□□□□ -0.76
NECAP1-210ENST00000638237 PCDH11XQ9BZA7 1347 aa10.3□□□□□ -0.76
NECAP1-210ENST00000638237 PCDH11YQ9BZA8 1340 aa10.3□□□□□ -0.76
NECAP1-210ENST00000638237 TPM3P06753 285 aa10.3□□□□□ -0.76
NECAP1-210ENST00000638237 C17orf53Q8N3J3 647 aaPredicted RBP10.3□□□□□ -0.76
NECAP1-210ENST00000638237 RUFY2Q8WXA3 655 aa10.3□□□□□ -0.76
NECAP1-210ENST00000638237 DNAJC2Q99543 621 aaKnown RBP10.3□□□□□ -0.76
NECAP1-210ENST00000638237 DBNDD2Q9BQY9 259 aa10.3□□□□□ -0.76
NECAP1-210ENST00000638237 HDAC5Q9UQL6 1122 aa10.3□□□□□ -0.76
NECAP1-210ENST00000638237 ABCC6O95255 1503 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 COL15A1P39059 1388 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 FIBPO43427 364 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 ST3GAL1Q11201 340 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 NECTIN1Q15223 517 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 TNNI3KQ59H18 835 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 CCDC129Q6ZRS4 1044 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 NECAB1Q8N987 351 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 KIAA1524Q8TCG1 905 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 SEC62Q99442 399 aaKnown RBP10.29□□□□□ -0.76
NECAP1-210ENST00000638237 SLAIN2Q9P270 581 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 FPGT-TNNI3KV9GXZ4 949 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 KCPQ6ZWJ8 1503 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 LAMA4Q16363 1823 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 CASP7P55210 303 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 UTP14CQ5TAP6 766 aaKnown RBP10.29□□□□□ -0.76
NECAP1-210ENST00000638237 CREB3L3Q68CJ9 461 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 TSC1Q92574 1164 aa10.29□□□□□ -0.76
NECAP1-210ENST00000638237 ZNF594Q96JF6 807 aaPredicted RBP10.29□□□□□ -0.76
NECAP1-210ENST00000638237 COPRSQ9NQ92 184 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms