RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 CALML4Q96GE6 196 aa19.43■□□□□ 0.7
CACNA1A-253ENST00000637927 KIAA1107Q9UPP5 1409 aa19.43■□□□□ 0.7
CACNA1A-253ENST00000637927 PDCL2Q8N4E4 241 aa19.43■□□□□ 0.7
CACNA1A-253ENST00000637927 CLIP2Q9UDT6 1046 aa19.43■□□□□ 0.7
CACNA1A-253ENST00000637927 STX8Q9UNK0 236 aa19.43■□□□□ 0.7
CACNA1A-253ENST00000637927 FGFR1OPO95684 399 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-253ENST00000637927 BACH2Q9BYV9 841 aa19.42■□□□□ 0.7
CACNA1A-253ENST00000637927 CASKIN1Q8WXD9 1431 aa19.42■□□□□ 0.7
CACNA1A-253ENST00000637927 PTPN14Q15678 1187 aa19.42■□□□□ 0.7
CACNA1A-253ENST00000637927 KAT14Q9H8E8 782 aa19.42■□□□□ 0.7
CACNA1A-253ENST00000637927 KRT28Q7Z3Y7 464 aa19.42■□□□□ 0.7
CACNA1A-253ENST00000637927 CAPZA3Q96KX2 299 aa19.42■□□□□ 0.7
CACNA1A-253ENST00000637927 SNX16P57768 344 aa19.42■□□□□ 0.7
CACNA1A-253ENST00000637927 SLU7O95391 586 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-253ENST00000637927 DIXDC1Q155Q3 683 aa19.42■□□□□ 0.7
CACNA1A-253ENST00000637927 AMOTL2Q9Y2J4 779 aa19.42■□□□□ 0.7
CACNA1A-253ENST00000637927 PAFAH1B1P43034 410 aa19.41■□□□□ 0.7
CACNA1A-253ENST00000637927 RBM27Q9P2N5 1060 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-253ENST00000637927 DDX46Q7L014 1031 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-253ENST00000637927 SSH1Q8WYL5 1049 aa19.41■□□□□ 0.7
CACNA1A-253ENST00000637927 FERMT1Q9BQL6 677 aa19.41■□□□□ 0.7
CACNA1A-253ENST00000637927 SNAPC4Q5SXM2 1469 aa19.41■□□□□ 0.7
CACNA1A-253ENST00000637927 CDK13Q14004 1512 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-253ENST00000637927 ZHX1Q9UKY1 873 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-253ENST00000637927 CLGNO14967 610 aa19.41■□□□□ 0.7
CACNA1A-253ENST00000637927 STX6O43752 255 aa19.41■□□□□ 0.7
CACNA1A-253ENST00000637927 ZBTB16Q05516 673 aa19.41■□□□□ 0.7
CACNA1A-253ENST00000637927 SSFA2P28290 1259 aa19.4■□□□□ 0.7
CACNA1A-253ENST00000637927 ERICH3Q5RHP9 1530 aa19.4■□□□□ 0.7
CACNA1A-253ENST00000637927 GJB2P29033 226 aa19.4■□□□□ 0.7
CACNA1A-253ENST00000637927 ZYXQ15942 572 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-253ENST00000637927 FSIP1Q8NA03 581 aa19.4■□□□□ 0.7
CACNA1A-253ENST00000637927 GLRX3O76003 335 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-253ENST00000637927 CCDC114Q96M63 670 aa19.4■□□□□ 0.7
CACNA1A-253ENST00000637927 LDHAL6AQ6ZMR3 332 aa19.4■□□□□ 0.7
CACNA1A-253ENST00000637927 HYPKQ9NX55 129 aa19.4■□□□□ 0.7
CACNA1A-253ENST00000637927 CGNQ9P2M7 1197 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-253ENST00000637927 GRIN2BQ13224 1484 aa19.4■□□□□ 0.7
CACNA1A-253ENST00000637927 USO1O60763 962 aaKnown RBP19.39■□□□□ 0.7
CACNA1A-253ENST00000637927 DNAAF4Q8WXU2 420 aa19.39■□□□□ 0.69
CACNA1A-253ENST00000637927 C8orf37Q96NL8 207 aa19.39■□□□□ 0.69
CACNA1A-253ENST00000637927 ZNF830Q96NB3 372 aaPredicted RBP19.39■□□□□ 0.69
CACNA1A-253ENST00000637927 TAOK3Q9H2K8 898 aa19.39■□□□□ 0.69
CACNA1A-253ENST00000637927 C4orf50Q6ZRC1 276 aa19.39■□□□□ 0.69
CACNA1A-253ENST00000637927 TRIM6Q9C030 488 aaPredicted RBP19.39■□□□□ 0.69
CACNA1A-253ENST00000637927 CCDC61Q9Y6R9 512 aa19.39■□□□□ 0.69
CACNA1A-253ENST00000637927 ABL1P00519 1130 aa19.38■□□□□ 0.69
CACNA1A-253ENST00000637927 SLFN5Q08AF3 891 aa19.38■□□□□ 0.69
CACNA1A-253ENST00000637927 ST5P78524 1137 aa19.38■□□□□ 0.69
CACNA1A-253ENST00000637927 WDR97A6NE52 1622 aa19.38■□□□□ 0.69
CACNA1A-253ENST00000637927 UBE3BQ7Z3V4 1068 aa19.38■□□□□ 0.69
CACNA1A-253ENST00000637927 TBCAO75347 108 aaKnown RBP19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 MCM4P33991 863 aa19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 C6orf163Q5TEZ5 329 aa19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 NOD1Q9Y239 953 aa19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 SUPT6HQ7KZ85 1726 aaKnown RBP19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 TSPY3P0CV98 308 aa19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 TSPY8P0CW00 308 aa19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 CUL4BQ13620 913 aa19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 SLC52A1Q9NWF4 448 aa19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 KRT5P13647 590 aa19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 PDE1CQ14123 709 aaPredicted RBP19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 KIAA0753Q2KHM9 967 aa19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 DACT3Q96B18 629 aaPredicted RBP19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 CETN1Q12798 172 aa19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 GTF3C6Q969F1 213 aa19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 SFPQP23246 707 aaKnown RBP eCLIP19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 IFRD2Q12894 506 aaPredicted RBP19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 TBC1D5Q92609 795 aa19.37■□□□□ 0.69
CACNA1A-253ENST00000637927 YEATS4O95619 227 aa19.36■□□□□ 0.69
CACNA1A-253ENST00000637927 NBPF6Q5VWK0 638 aa19.36■□□□□ 0.69
CACNA1A-253ENST00000637927 NBPF5PQ86XG9 351 aaPredicted RBP19.36■□□□□ 0.69
CACNA1A-253ENST00000637927 RPAP2Q8IXW5 612 aaPredicted RBP19.36■□□□□ 0.69
CACNA1A-253ENST00000637927 NBPF4Q96M43 638 aa19.36■□□□□ 0.69
CACNA1A-253ENST00000637927 KCNK9Q9NPC2 374 aa19.36■□□□□ 0.69
CACNA1A-253ENST00000637927 USP16Q9Y5T5 823 aa19.36■□□□□ 0.69
CACNA1A-253ENST00000637927 CCT6BQ92526 530 aa19.36■□□□□ 0.69
CACNA1A-253ENST00000637927 PHF8Q9UPP1 1060 aa19.36■□□□□ 0.69
CACNA1A-253ENST00000637927 POGZQ7Z3K3 1410 aa19.36■□□□□ 0.69
CACNA1A-253ENST00000637927 ATP6V1AP38606 617 aa19.36■□□□□ 0.69
CACNA1A-253ENST00000637927 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.36■□□□□ 0.69
CACNA1A-253ENST00000637927 NACA2Q9H009 215 aa19.36■□□□□ 0.69
CACNA1A-253ENST00000637927 RNASE9P60153 205 aaKnown RBP19.36■□□□□ 0.69
CACNA1A-253ENST00000637927 TTC30AQ86WT1 665 aa19.36■□□□□ 0.69
CACNA1A-253ENST00000637927 FAM13AO94988 1023 aa19.35■□□□□ 0.69
CACNA1A-253ENST00000637927 TSTA3Q13630 321 aaPredicted RBP19.35■□□□□ 0.69
CACNA1A-253ENST00000637927 TTF1Q15361 905 aaPredicted RBP19.35■□□□□ 0.69
CACNA1A-253ENST00000637927 NECAB1Q8N987 351 aa19.35■□□□□ 0.69
CACNA1A-253ENST00000637927 EXOC1Q9NV70 894 aa19.35■□□□□ 0.69
CACNA1A-253ENST00000637927 CWC25Q9NXE8 425 aaPredicted RBP19.35■□□□□ 0.69
CACNA1A-253ENST00000637927 ATAD2Q6PL18 1390 aa19.35■□□□□ 0.69
CACNA1A-253ENST00000637927 SLC39A6Q13433 755 aa19.35■□□□□ 0.69
CACNA1A-253ENST00000637927 ARHGEF11O15085 1522 aa19.35■□□□□ 0.69
CACNA1A-253ENST00000637927 CEP83Q9Y592 693 aa19.35■□□□□ 0.69
CACNA1A-253ENST00000637927 MFSD6Q6ZSS7 791 aa19.35■□□□□ 0.69
CACNA1A-253ENST00000637927 ANO10Q9NW15 660 aa19.35■□□□□ 0.69
CACNA1A-253ENST00000637927 DDX39AO00148 427 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-253ENST00000637927 SAP30BPQ9UHR5 308 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-253ENST00000637927 KMT5BQ4FZB7 885 aa19.34■□□□□ 0.69
CACNA1A-253ENST00000637927 TRIM47Q96LD4 638 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms