RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 GRNP28799 593 aaKnown RBP3.9□□□□□ -1.79
CD46-219ENST00000636114 ARHGAP4P98171 946 aa3.9□□□□□ -1.79
CD46-219ENST00000636114 SPEM2Q0P670 501 aa3.9□□□□□ -1.79
CD46-219ENST00000636114 NEUROD1Q13562 356 aa3.9□□□□□ -1.79
CD46-219ENST00000636114 ECM1Q16610 540 aa3.9□□□□□ -1.79
CD46-219ENST00000636114 CMTR1Q8N1G2 835 aaKnown RBP3.9□□□□□ -1.79
CD46-219ENST00000636114 EFCC1Q9HA90 598 aa3.9□□□□□ -1.79
CD46-219ENST00000636114 KIF27Q86VH2 1401 aa3.89□□□□□ -1.79
CD46-219ENST00000636114 IGF1RP08069 1367 aa3.89□□□□□ -1.79
CD46-219ENST00000636114 ZBTB7CA1YPR0 619 aa3.89□□□□□ -1.79
CD46-219ENST00000636114 EGFRP00533 1210 aa3.89□□□□□ -1.79
CD46-219ENST00000636114 RPLP1P05386 114 aaKnown RBP3.89□□□□□ -1.79
CD46-219ENST00000636114 PCSK2P16519 638 aa3.89□□□□□ -1.79
CD46-219ENST00000636114 MZF1P28698 734 aaPredicted RBP3.89□□□□□ -1.79
CD46-219ENST00000636114 CCINQ13939 588 aa3.89□□□□□ -1.79
CD46-219ENST00000636114 ZNF468Q5VIY5 522 aaPredicted RBP3.89□□□□□ -1.79
CD46-219ENST00000636114 GPR152Q8TDT2 470 aa3.89□□□□□ -1.79
CD46-219ENST00000636114 AVENQ9NQS1 362 aaPredicted RBP3.89□□□□□ -1.79
CD46-219ENST00000636114 BIN2Q9UBW5 565 aaPredicted RBP3.89□□□□□ -1.79
CD46-219ENST00000636114 PRR12Q9ULL5 1215 aa3.89□□□□□ -1.79
CD46-219ENST00000636114 FNDC3AQ9Y2H6 1198 aaKnown RBP3.89□□□□□ -1.79
CD46-219ENST00000636114 ERICH3Q5RHP9 1530 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 C2CD2LO14523 706 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 WIPF1O43516 503 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 NDUFB5O43674 189 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 FZD6O60353 706 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 XYLBO75191 536 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 ADAMTS2O95450 1211 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 PDGFAP04085 211 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 SLURP2P0DP57 97 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 ARAFP10398 606 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 USP5P45974 858 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 DNM1Q05193 864 aaKnown RBP3.88□□□□□ -1.79
CD46-219ENST00000636114 GRIN2CQ14957 1233 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 TRIP4Q15650 581 aaPredicted RBP3.88□□□□□ -1.79
CD46-219ENST00000636114 SND1Q7KZF4 910 aaKnown RBP eCLIP3.88□□□□□ -1.792e-11■■□□□ 14.4
CD46-219ENST00000636114 EDEM1Q92611 657 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 NUDT16Q96DE0 195 aaKnown RBP3.88□□□□□ -1.79
CD46-219ENST00000636114 PNMA5Q96PV4 448 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 SLC30A3Q99726 388 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 GSX2Q9BZM3 304 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 USP20Q9Y2K6 914 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 KCNMB2Q9Y691 235 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 PRDM2Q13029 1718 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 UBAP1LF5GYI3 381 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 ADH6P28332 368 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 TTC16Q8NEE8 873 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 OXCT2Q9BYC2 517 aaPredicted RBP3.88□□□□□ -1.79
CD46-219ENST00000636114 GDF2Q9UK05 429 aaPredicted RBP3.88□□□□□ -1.79
CD46-219ENST00000636114 BRPF3Q9ULD4 1205 aa3.88□□□□□ -1.79
CD46-219ENST00000636114 RUSC2Q8N2Y8 1516 aa3.87□□□□□ -1.79
CD46-219ENST00000636114 CC2D2AQ9P2K1 1620 aa3.87□□□□□ -1.79
CD46-219ENST00000636114 SIN3BO75182 1162 aa3.87□□□□□ -1.79
CD46-219ENST00000636114 PDE12Q6L8Q7 609 aaKnown RBP3.87□□□□□ -1.79
CD46-219ENST00000636114 RAB44Q7Z6P3 723 aaPredicted RBP3.87□□□□□ -1.79
CD46-219ENST00000636114 SYT9Q86SS6 491 aa3.87□□□□□ -1.79
CD46-219ENST00000636114 GOLGA6L1Q8N7Z2 621 aa3.87□□□□□ -1.79
CD46-219ENST00000636114 BHMTQ93088 406 aa3.87□□□□□ -1.79
CD46-219ENST00000636114 CITED4Q96RK1 184 aa3.87□□□□□ -1.79
CD46-219ENST00000636114 POLIQ9UNA4 740 aa3.87□□□□□ -1.79
CD46-219ENST00000636114 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.87□□□□□ -1.79
CD46-219ENST00000636114 NFKB1P19838 968 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 EHHADHQ08426 723 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 SLCO4C1Q6ZQN7 724 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 GJD3Q8N144 294 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 LRRC4BQ9NT99 713 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 CCDC87Q9NVE4 849 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 PRXQ9BXM0 1461 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 CLIP1P30622 1438 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 SASH3O75995 380 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 MAP3K6O95382 1288 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 RARAP10276 462 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 PCBP4P57723 403 aaKnown RBP3.86□□□□□ -1.79
CD46-219ENST00000636114 PDE3BQ13370 1112 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 C8orf34Q49A92 452 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 KRT25Q7Z3Z0 450 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 NLRP13Q86W25 1043 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 GZF1Q9H116 711 aaPredicted RBP3.86□□□□□ -1.79
CD46-219ENST00000636114 DCTN4Q9UJW0 460 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 GGA1Q9UJY5 639 aa3.86□□□□□ -1.79
CD46-219ENST00000636114 VPS8Q8N3P4 1428 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 CUX1P39880 1505 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 NEURL1BA8MQ27 555 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 TARSP26639 723 aaKnown RBP3.85□□□□□ -1.79
CD46-219ENST00000636114 MAPK1P28482 360 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 XKR5Q6UX68 686 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 ZNF438Q7Z4V0 828 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 TNFRSF25Q93038 417 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 ACDQ96AP0 544 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 RBCK1Q9BYM8 510 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 ZFATQ9P243 1243 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 KLF15Q9UIH9 416 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 BCRP11274 1271 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 MARSP56192 900 aaKnown RBP3.85□□□□□ -1.79
CD46-219ENST00000636114 FCHSD1Q86WN1 690 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 FAM129BQ96TA1 746 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 KRTAP4-5Q9BYR2 181 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 GGNBP2Q9H3C7 697 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 ELP3Q9H9T3 547 aa3.85□□□□□ -1.79
CD46-219ENST00000636114 ABI2Q9NYB9 513 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms