RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 PXDNQ92626 1479 aa8.94□□□□□ -0.98
PKP4-217ENST00000628904 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.94□□□□□ -0.98
PKP4-217ENST00000628904 LMTK3Q96Q04 1460 aa8.94□□□□□ -0.98
PKP4-217ENST00000628904 PCDH11XQ9BZA7 1347 aa8.94□□□□□ -0.98
PKP4-217ENST00000628904 PCDH11YQ9BZA8 1340 aa8.94□□□□□ -0.98
PKP4-217ENST00000628904 IRS4O14654 1257 aaPredicted RBP8.94□□□□□ -0.98
PKP4-217ENST00000628904 GIMAP6Q6P9H5 292 aa8.94□□□□□ -0.98
PKP4-217ENST00000628904 C1orf167Q5SNV9 1468 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 A0A0G2JLW4 131 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 JAK2O60674 1132 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 POLR3DP05423 398 aaPredicted RBP8.93□□□□□ -0.98
PKP4-217ENST00000628904 APOBRQ0VD83 1088 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 PLBD2Q8NHP8 589 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 NUP133Q8WUM0 1156 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 ERCC4Q92889 916 aaPredicted RBP8.93□□□□□ -0.98
PKP4-217ENST00000628904 KAZALD1Q96I82 304 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 LRP2BPQ9P2M1 347 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 ITGA6P23229 1130 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 MRE11P49959 708 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 PDIA6Q15084 440 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 ISM2Q6H9L7 571 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 SAMD1Q6SPF0 538 aaPredicted RBP8.93□□□□□ -0.98
PKP4-217ENST00000628904 USP48Q86UV5 1035 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 ZNF830Q96NB3 372 aaPredicted RBP8.93□□□□□ -0.98
PKP4-217ENST00000628904 ZKSCAN3Q9BRR0 538 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 GPHNQ9NQX3 736 aaPredicted RBP8.93□□□□□ -0.98
PKP4-217ENST00000628904 PTPN12Q05209 780 aaKnown RBP8.93□□□□□ -0.98
PKP4-217ENST00000628904 TRDNQ13061 729 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 SKOR2Q2VWA4 1001 aaPredicted RBP8.93□□□□□ -0.98
PKP4-217ENST00000628904 Q6ZUG5 572 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 GREM2Q9H772 168 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 PAG1Q9NWQ8 432 aa8.93□□□□□ -0.98
PKP4-217ENST00000628904 STX6O43752 255 aa8.92□□□□□ -0.98
PKP4-217ENST00000628904 SYT1P21579 422 aa8.92□□□□□ -0.98
PKP4-217ENST00000628904 PSMA5P28066 241 aa8.92□□□□□ -0.98
PKP4-217ENST00000628904 SLC9C2Q5TAH2 1124 aa8.92□□□□□ -0.98
PKP4-217ENST00000628904 RAI14Q9P0K7 980 aa8.92□□□□□ -0.98
PKP4-217ENST00000628904 ZAP70P43403 619 aa8.92□□□□□ -0.98
PKP4-217ENST00000628904 SEC31BQ9NQW1 1179 aa8.92□□□□□ -0.98
PKP4-217ENST00000628904 A0A087WWV3 80 aa8.92□□□□□ -0.98
PKP4-217ENST00000628904 ZSCAN23Q3MJ62 389 aa8.92□□□□□ -0.98
PKP4-217ENST00000628904 CWC22Q9HCG8 908 aaKnown RBP8.92□□□□□ -0.98
PKP4-217ENST00000628904 CCDC171Q6TFL3 1326 aa8.92□□□□□ -0.98
PKP4-217ENST00000628904 ATP2B3Q16720 1220 aa8.91□□□□□ -0.98
PKP4-217ENST00000628904 ME3Q16798 604 aa8.91□□□□□ -0.98
PKP4-217ENST00000628904 RUFY3Q7L099 469 aa8.91□□□□□ -0.98
PKP4-217ENST00000628904 MICU3Q86XE3 530 aa8.91□□□□□ -0.98
PKP4-217ENST00000628904 NEK1Q96PY6 1258 aa8.91□□□□□ -0.98
PKP4-217ENST00000628904 MYL10Q9BUA6 226 aa8.91□□□□□ -0.98
PKP4-217ENST00000628904 INCENPQ9NQS7 918 aa8.91□□□□□ -0.98
PKP4-217ENST00000628904 WDR17Q8IZU2 1322 aa8.91□□□□□ -0.98
PKP4-217ENST00000628904 ANKRD18BA2A2Z9 1011 aa8.91□□□□□ -0.98
PKP4-217ENST00000628904 SLC27A2O14975 620 aa8.91□□□□□ -0.98
PKP4-217ENST00000628904 CIZ1Q9ULV3 898 aaPredicted RBP8.91□□□□□ -0.98
PKP4-217ENST00000628904 WDR33Q9C0J8 1336 aaKnown RBP8.91□□□□□ -0.98
PKP4-217ENST00000628904 RGS12O14924 1447 aa8.91□□□□□ -0.98
PKP4-217ENST00000628904 XAGE2Q96GT9 111 aa8.91□□□□□ -0.98
PKP4-217ENST00000628904 AIDAQ96BJ3 306 aa8.9□□□□□ -0.98
PKP4-217ENST00000628904 EYA2O00167 538 aa8.9□□□□□ -0.98
PKP4-217ENST00000628904 HOXB7P09629 217 aa8.9□□□□□ -0.98
PKP4-217ENST00000628904 HSPA4P34932 840 aa8.9□□□□□ -0.98
PKP4-217ENST00000628904 MCM2P49736 904 aa8.9□□□□□ -0.98
PKP4-217ENST00000628904 POLA2Q14181 598 aa8.9□□□□□ -0.98
PKP4-217ENST00000628904 CMTR1Q8N1G2 835 aaKnown RBP8.9□□□□□ -0.98
PKP4-217ENST00000628904 LSG1Q9H089 658 aaKnown RBP8.9□□□□□ -0.98
PKP4-217ENST00000628904 GJB4Q9NTQ9 266 aa8.9□□□□□ -0.98
PKP4-217ENST00000628904 USP25Q9UHP3 1055 aa8.9□□□□□ -0.98
PKP4-217ENST00000628904 TPCN1Q9ULQ1 816 aa8.9□□□□□ -0.98
PKP4-217ENST00000628904 KDM4FA0A1W2PPD8 638 aa8.9□□□□□ -0.99
PKP4-217ENST00000628904 TDO2P48775 406 aa8.9□□□□□ -0.99
PKP4-217ENST00000628904 SYAP1Q96A49 352 aaPredicted RBP8.9□□□□□ -0.99
PKP4-217ENST00000628904 RAD50Q92878 1312 aa8.9□□□□□ -0.99
PKP4-217ENST00000628904 hCG_1642624A0A1W2PR95 340 aa8.89□□□□□ -0.99
PKP4-217ENST00000628904 PRDM1O75626 825 aa8.89□□□□□ -0.99
PKP4-217ENST00000628904 ME1P48163 572 aa8.89□□□□□ -0.99
PKP4-217ENST00000628904 TMEM63CQ9P1W3 806 aa8.89□□□□□ -0.99
PKP4-217ENST00000628904 ANKARQ7Z5J8 1434 aa8.89□□□□□ -0.99
PKP4-217ENST00000628904 SCARF1Q14162 830 aa8.89□□□□□ -0.99
PKP4-217ENST00000628904 MCMDC2Q4G0Z9 681 aa8.89□□□□□ -0.99
PKP4-217ENST00000628904 KLHL34Q8N239 644 aa8.89□□□□□ -0.99
PKP4-217ENST00000628904 FTOQ9C0B1 505 aaKnown RBP eCLIP8.89□□□□□ -0.99
PKP4-217ENST00000628904 CDC37L1Q7L3B6 337 aa8.89□□□□□ -0.99
PKP4-217ENST00000628904 SPATA32Q96LK8 384 aa8.89□□□□□ -0.99
PKP4-217ENST00000628904 TFCP2L1Q9NZI6 479 aa8.89□□□□□ -0.99
PKP4-217ENST00000628904 NRKQ7Z2Y5 1582 aa8.89□□□□□ -0.99
PKP4-217ENST00000628904 NEURL4Q96JN8 1562 aa8.89□□□□□ -0.99
PKP4-217ENST00000628904 RGPD8O14715 1765 aaPredicted RBP8.88□□□□□ -0.99
PKP4-217ENST00000628904 HIP1O00291 1037 aa8.88□□□□□ -0.99
PKP4-217ENST00000628904 HSP90AA4PQ58FG1 418 aa8.88□□□□□ -0.99
PKP4-217ENST00000628904 GPT2Q8TD30 523 aa8.88□□□□□ -0.99
PKP4-217ENST00000628904 ATG3Q9NT62 314 aa8.88□□□□□ -0.99
PKP4-217ENST00000628904 SSH2Q76I76 1423 aa8.88□□□□□ -0.99
PKP4-217ENST00000628904 TTC41PQ6P2S7 1318 aa8.88□□□□□ -0.99
PKP4-217ENST00000628904 WTIPA6NIX2 430 aaPredicted RBP8.88□□□□□ -0.99
PKP4-217ENST00000628904 IL15P40933 162 aaPredicted RBP8.88□□□□□ -0.99
PKP4-217ENST00000628904 TCIRG1Q13488 830 aa8.88□□□□□ -0.99
PKP4-217ENST00000628904 RBSNQ9H1K0 784 aa8.88□□□□□ -0.99
PKP4-217ENST00000628904 ZDHHC9Q9Y397 364 aa8.88□□□□□ -0.99
PKP4-217ENST00000628904 ATP6V1DQ9Y5K8 247 aa8.88□□□□□ -0.99
PKP4-217ENST00000628904 BIN1O00499 593 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms