RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 TMEM87AQ8NBN3 555 aa9.96□□□□□ -0.82
SND1-IT1-201ENST00000623342 RBSNQ9H1K0 784 aa9.96□□□□□ -0.82
SND1-IT1-201ENST00000623342 HMG20BQ9P0W2 317 aa9.96□□□□□ -0.82
SND1-IT1-201ENST00000623342 NUP188Q5SRE5 1749 aa9.96□□□□□ -0.82
SND1-IT1-201ENST00000623342 SYCE3A1L190 88 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 A1BGP04217 495 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 CLCN1P35523 988 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 USP48Q86UV5 1035 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 EDC3Q96F86 508 aaKnown RBP9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 DBNDD2Q9BQY9 259 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 ATP6V1DQ9Y5K8 247 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 KAT6BQ8WYB5 2073 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 ESPNB1AK53 854 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 TAF5LO75529 589 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 F13A1P00488 732 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 GJB2P29033 226 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 ANKRD1Q15327 319 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 ME3Q16798 604 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 BLOC1S2Q6QNY1 142 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 ZNF589Q86UQ0 364 aaPredicted RBP9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 DDX54Q8TDD1 881 aaKnown RBP9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 HAUS7Q99871 368 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 ALDH8A1Q9H2A2 487 aaPredicted RBP9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 GDPD2Q9HCC8 539 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 CHMP3Q9Y3E7 222 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 TNS2Q63HR2 1409 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 ABCA3Q99758 1704 aa9.95□□□□□ -0.82
SND1-IT1-201ENST00000623342 TSGA10IPQ3SY00 556 aa9.94□□□□□ -0.82
SND1-IT1-201ENST00000623342 CCDC191Q8NCU4 936 aa9.94□□□□□ -0.82
SND1-IT1-201ENST00000623342 TJP1Q07157 1748 aa9.94□□□□□ -0.82
SND1-IT1-201ENST00000623342 SHANK3Q9BYB0 1731 aa9.94□□□□□ -0.82
SND1-IT1-201ENST00000623342 GADD45BO75293 160 aaPredicted RBP9.94□□□□□ -0.82
SND1-IT1-201ENST00000623342 RPS6KB1P23443 525 aa9.94□□□□□ -0.82
SND1-IT1-201ENST00000623342 EVA1CP58658 441 aa9.94□□□□□ -0.82
SND1-IT1-201ENST00000623342 USPL1Q5W0Q7 1092 aa9.94□□□□□ -0.82
SND1-IT1-201ENST00000623342 DNAJC2Q99543 621 aaKnown RBP9.94□□□□□ -0.82
SND1-IT1-201ENST00000623342 TPCN1Q9ULQ1 816 aa9.94□□□□□ -0.82
SND1-IT1-201ENST00000623342 PHF14O94880 888 aa9.93□□□□□ -0.82
SND1-IT1-201ENST00000623342 PDIA4P13667 645 aaKnown RBP9.93□□□□□ -0.82
SND1-IT1-201ENST00000623342 ST3GAL1Q11201 340 aa9.93□□□□□ -0.82
SND1-IT1-201ENST00000623342 ATG9AQ7Z3C6 839 aa9.93□□□□□ -0.82
SND1-IT1-201ENST00000623342 ZBTB3Q9H5J0 574 aa9.93□□□□□ -0.82
SND1-IT1-201ENST00000623342 GPR108Q9NPR9 543 aa9.93□□□□□ -0.82
SND1-IT1-201ENST00000623342 STRN4Q9NRL3 753 aa9.93□□□□□ -0.82
SND1-IT1-201ENST00000623342 CNPY2Q9Y2B0 182 aa9.93□□□□□ -0.82
SND1-IT1-201ENST00000623342 IL15P40933 162 aaPredicted RBP9.93□□□□□ -0.82
SND1-IT1-201ENST00000623342 KRT32Q14532 448 aa9.93□□□□□ -0.82
SND1-IT1-201ENST00000623342 MTMR6Q9Y217 621 aa9.93□□□□□ -0.82
SND1-IT1-201ENST00000623342 ZNF609O15014 1411 aa9.92□□□□□ -0.82
SND1-IT1-201ENST00000623342 MCMDC2Q4G0Z9 681 aa9.92□□□□□ -0.82
SND1-IT1-201ENST00000623342 NECAB1Q8N987 351 aa9.92□□□□□ -0.82
SND1-IT1-201ENST00000623342 KBTBD3Q8NAB2 608 aa9.92□□□□□ -0.82
SND1-IT1-201ENST00000623342 ATG3Q9NT62 314 aa9.92□□□□□ -0.82
SND1-IT1-201ENST00000623342 NDUFB9Q9Y6M9 179 aa9.92□□□□□ -0.82
SND1-IT1-201ENST00000623342 U3KPZ7 1027 aaPredicted RBP9.92□□□□□ -0.82
SND1-IT1-201ENST00000623342 UBE2HP62256 183 aa9.92□□□□□ -0.82
SND1-IT1-201ENST00000623342 CSPP1Q1MSJ5 1256 aa9.92□□□□□ -0.82
SND1-IT1-201ENST00000623342 DDX46Q7L014 1031 aaKnown RBP9.92□□□□□ -0.82
SND1-IT1-201ENST00000623342 TICAM2Q86XR7 235 aa9.92□□□□□ -0.82
SND1-IT1-201ENST00000623342 NEUROD6Q96NK8 337 aa9.92□□□□□ -0.82
SND1-IT1-201ENST00000623342 TMOD3Q9NYL9 352 aa9.92□□□□□ -0.82
SND1-IT1-201ENST00000623342 TAF6LQ9Y6J9 622 aa9.92□□□□□ -0.82
SND1-IT1-201ENST00000623342 TCHHQ07283 1943 aa9.91□□□□□ -0.82
SND1-IT1-201ENST00000623342 PALLDQ8WX93 1383 aa9.91□□□□□ -0.82
SND1-IT1-201ENST00000623342 EYA2O00167 538 aa9.91□□□□□ -0.82
SND1-IT1-201ENST00000623342 CIAO1O76071 339 aa9.91□□□□□ -0.82
SND1-IT1-201ENST00000623342 COL9A3Q14050 684 aaPredicted RBP9.91□□□□□ -0.82
SND1-IT1-201ENST00000623342 ISCA1Q9BUE6 129 aa9.91□□□□□ -0.82
SND1-IT1-201ENST00000623342 TSPY26PQ9H489 355 aa9.91□□□□□ -0.82
SND1-IT1-201ENST00000623342 SH3TC1Q8TE82 1336 aa9.91□□□□□ -0.82
SND1-IT1-201ENST00000623342 TOGARAM1Q9Y4F4 1720 aa9.91□□□□□ -0.82
SND1-IT1-201ENST00000623342 PDCP20941 246 aa9.91□□□□□ -0.82
SND1-IT1-201ENST00000623342 TOB2Q14106 344 aaPredicted RBP9.91□□□□□ -0.82
SND1-IT1-201ENST00000623342 LARP1BQ659C4 914 aaKnown RBP9.91□□□□□ -0.82
SND1-IT1-201ENST00000623342 PDLIM2Q96JY6 352 aa9.91□□□□□ -0.82
SND1-IT1-201ENST00000623342 TCEANC2Q96MN5 208 aa9.91□□□□□ -0.82
SND1-IT1-201ENST00000623342 PAG1Q9NWQ8 432 aa9.91□□□□□ -0.82
SND1-IT1-201ENST00000623342 VPS37CA5D8V6 355 aaPredicted RBP9.9□□□□□ -0.82
SND1-IT1-201ENST00000623342 TIMM10P62072 90 aa9.9□□□□□ -0.82
SND1-IT1-201ENST00000623342 TCIRG1Q13488 830 aa9.9□□□□□ -0.82
SND1-IT1-201ENST00000623342 LRRC24Q50LG9 513 aa9.9□□□□□ -0.82
SND1-IT1-201ENST00000623342 HS1BP3Q53T59 392 aa9.9□□□□□ -0.82
SND1-IT1-201ENST00000623342 CCDC183Q5T5S1 534 aa9.9□□□□□ -0.82
SND1-IT1-201ENST00000623342 CCDC129Q6ZRS4 1044 aa9.9□□□□□ -0.82
SND1-IT1-201ENST00000623342 NEK1Q96PY6 1258 aa9.9□□□□□ -0.82
SND1-IT1-201ENST00000623342 SEC62Q99442 399 aaKnown RBP9.9□□□□□ -0.82
SND1-IT1-201ENST00000623342 TEX13AQ9BXU3 409 aaPredicted RBP9.9□□□□□ -0.82
SND1-IT1-201ENST00000623342 HELLSQ9NRZ9 838 aa9.9□□□□□ -0.82
SND1-IT1-201ENST00000623342 CCDC9Q9Y3X0 531 aaKnown RBP9.9□□□□□ -0.82
SND1-IT1-201ENST00000623342 GOLIM4O00461 696 aa9.9□□□□□ -0.83
SND1-IT1-201ENST00000623342 FIBPO43427 364 aa9.9□□□□□ -0.83
SND1-IT1-201ENST00000623342 LETM1O95202 739 aaPredicted RBP9.9□□□□□ -0.83
SND1-IT1-201ENST00000623342 CHGBP05060 677 aa9.9□□□□□ -0.83
SND1-IT1-201ENST00000623342 DNM1Q05193 864 aaKnown RBP9.9□□□□□ -0.83
SND1-IT1-201ENST00000623342 VSIG10Q8N0Z9 540 aa9.9□□□□□ -0.83
SND1-IT1-201ENST00000623342 ZNF594Q96JF6 807 aaPredicted RBP9.9□□□□□ -0.83
SND1-IT1-201ENST00000623342 NHSL1Q5SYE7 1610 aa9.89□□□□□ -0.83
SND1-IT1-201ENST00000623342 DTNBO60941 627 aa9.89□□□□□ -0.83
SND1-IT1-201ENST00000623342 TRIM28Q13263 835 aaKnown RBP9.89□□□□□ -0.83
SND1-IT1-201ENST00000623342 ZSCAN30Q86W11 494 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms