RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 ZNF771Q7L3S4 317 aaPredicted RBP15.03■□□□□ -0
MSH6-215ENST00000622629 C16orf45Q96MC5 204 aaPredicted RBP15.03■□□□□ -0
MSH6-215ENST00000622629 CLIP2Q9UDT6 1046 aa15.03■□□□□ -0
MSH6-215ENST00000622629 CCDC144CPQ8IYA2 1237 aa15.03■□□□□ -0
MSH6-215ENST00000622629 DBNDD2Q9BQY9 259 aa15.03■□□□□ -0
MSH6-215ENST00000622629 TSR1Q2NL82 804 aaKnown RBP15.03■□□□□ -0
MSH6-215ENST00000622629 BEND3Q5T5X7 828 aa15.03■□□□□ -0
MSH6-215ENST00000622629 FAM177A1Q8N128 213 aaPredicted RBP15.03■□□□□ -0
MSH6-215ENST00000622629 OSBPL3Q9H4L5 887 aa15.03■□□□□ -0
MSH6-215ENST00000622629 ORC3Q9UBD5 711 aaPredicted RBP15.03■□□□□ -0
MSH6-215ENST00000622629 SETBP1Q9Y6X0 1596 aa15.03■□□□□ -0
MSH6-215ENST00000622629 AOX1Q06278 1338 aa15.03■□□□□ -0
MSH6-215ENST00000622629 GIGYF1O75420 1035 aaPredicted RBP15.03■□□□□ -0
MSH6-215ENST00000622629 GPT2Q8TD30 523 aa15.03■□□□□ -0
MSH6-215ENST00000622629 ZNF496Q96IT1 587 aaPredicted RBP15.03■□□□□ -0
MSH6-215ENST00000622629 IQGAP1P46940 1657 aa15.03■□□□□ -0
MSH6-215ENST00000622629 ZNF335Q9H4Z2 1342 aaPredicted RBP15.02■□□□□ -0
MSH6-215ENST00000622629 PTH1RQ03431 593 aa15.02■□□□□ -0
MSH6-215ENST00000622629 ANO6Q4KMQ2 910 aa15.02■□□□□ -0
MSH6-215ENST00000622629 CCAR1Q8IX12 1150 aaKnown RBP15.02■□□□□ -0
MSH6-215ENST00000622629 RAD21O60216 631 aa15.02□□□□□ -0.01
MSH6-215ENST00000622629 PROSER3Q2NL68 480 aa15.02□□□□□ -0.01
MSH6-215ENST00000622629 RASEFQ8IZ41 740 aa15.02□□□□□ -0.01
MSH6-215ENST00000622629 ANO10Q9NW15 660 aa15.02□□□□□ -0.01
MSH6-215ENST00000622629 PLEKHG1Q9ULL1 1385 aa15.02□□□□□ -0.01
MSH6-215ENST00000622629 CDKL5O76039 1030 aa15.02□□□□□ -0.01
MSH6-215ENST00000622629 HSP90AB3PQ58FF7 597 aa15.02□□□□□ -0.01
MSH6-215ENST00000622629 ZCRB1Q8TBF4 217 aaKnown RBP15.02□□□□□ -0.01
MSH6-215ENST00000622629 NOL10Q9BSC4 688 aaKnown RBP15.02□□□□□ -0.01
MSH6-215ENST00000622629 LRRC7Q96NW7 1537 aa15.02□□□□□ -0.01
MSH6-215ENST00000622629 G3V3G9 751 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 DCAF8Q5TAQ9 597 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 ISM2Q6H9L7 571 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 EAF2Q96CJ1 260 aaPredicted RBP15.01□□□□□ -0.01
MSH6-215ENST00000622629 NPHP3Q7Z494 1330 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 LMTK3Q96Q04 1460 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 SLC27A2O14975 620 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 NAPBQ9H115 298 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 TOM1O60784 492 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 ANKRD20A12PQ8NF67 263 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 FAM200AQ8TCP9 573 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 PIBF1Q8WXW3 757 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 PAG1Q9NWQ8 432 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 APOBRQ0VD83 1088 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 NOLC1Q14978 699 aaKnown RBP eCLIP15.01□□□□□ -0.01
MSH6-215ENST00000622629 TTLL5Q6EMB2 1281 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 MICU3Q86XE3 530 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 AMOTL1Q8IY63 956 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 PCMTD1Q96MG8 357 aaPredicted RBP15.01□□□□□ -0.01
MSH6-215ENST00000622629 DNAJC25Q9H1X3 360 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 TRMT1Q9NXH9 659 aaKnown RBP15.01□□□□□ -0.01
MSH6-215ENST00000622629 RAI14Q9P0K7 980 aa15.01□□□□□ -0.01
MSH6-215ENST00000622629 ALKQ9UM73 1620 aa15□□□□□ -0.01
MSH6-215ENST00000622629 MINDY4BA8MYZ0 360 aa15□□□□□ -0.01
MSH6-215ENST00000622629 UBAC1Q9BSL1 405 aa15□□□□□ -0.01
MSH6-215ENST00000622629 BRMS1Q9HCU9 246 aa15□□□□□ -0.01
MSH6-215ENST00000622629 NLRP1Q9C000 1473 aa15□□□□□ -0.01
MSH6-215ENST00000622629 NPHP4O75161 1426 aaPredicted RBP15□□□□□ -0.01
MSH6-215ENST00000622629 KLF18A0A0U1RQI7 1052 aa15□□□□□ -0.01
MSH6-215ENST00000622629 PRAMEF22A3QJZ6 481 aa15□□□□□ -0.01
MSH6-215ENST00000622629 OFD1O75665 1012 aa15□□□□□ -0.01
MSH6-215ENST00000622629 CCDC186Q7Z3E2 898 aa15□□□□□ -0.01
MSH6-215ENST00000622629 TMEM94Q12767 1356 aa15□□□□□ -0.01
MSH6-215ENST00000622629 IL15P40933 162 aaPredicted RBP15□□□□□ -0.01
MSH6-215ENST00000622629 BICDL1Q6ZP65 573 aa15□□□□□ -0.01
MSH6-215ENST00000622629 DCAF5Q96JK2 942 aa15□□□□□ -0.01
MSH6-215ENST00000622629 KIF2CQ99661 725 aa15□□□□□ -0.01
MSH6-215ENST00000622629 STAP2Q9UGK3 403 aa15□□□□□ -0.01
MSH6-215ENST00000622629 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15□□□□□ -0.01
MSH6-215ENST00000622629 LMTK2Q8IWU2 1503 aa15□□□□□ -0.01
MSH6-215ENST00000622629 TYRO3Q06418 890 aa14.99□□□□□ -0.01
MSH6-215ENST00000622629 GCKRQ14397 625 aa14.99□□□□□ -0.01
MSH6-215ENST00000622629 METTL22Q9BUU2 404 aaPredicted RBP14.99□□□□□ -0.01
MSH6-215ENST00000622629 ZSCAN16Q9H4T2 348 aaPredicted RBP14.99□□□□□ -0.01
MSH6-215ENST00000622629 ANKRD18BA2A2Z9 1011 aa14.99□□□□□ -0.01
MSH6-215ENST00000622629 CFAP100Q494V2 611 aa14.99□□□□□ -0.01
MSH6-215ENST00000622629 HS1BP3Q53T59 392 aa14.98□□□□□ -0.01
MSH6-215ENST00000622629 TNNI3KQ59H18 835 aa14.98□□□□□ -0.01
MSH6-215ENST00000622629 LUZP1Q86V48 1076 aa14.98□□□□□ -0.01
MSH6-215ENST00000622629 FPGT-TNNI3KV9GXZ4 949 aa14.98□□□□□ -0.01
MSH6-215ENST00000622629 SLAIN2Q9P270 581 aa14.98□□□□□ -0.01
MSH6-215ENST00000622629 NOL7Q9UMY1 257 aaKnown RBP14.98□□□□□ -0.01
MSH6-215ENST00000622629 NGLY1Q96IV0 654 aa14.98□□□□□ -0.01
MSH6-215ENST00000622629 TNNT1P13805 278 aa14.98□□□□□ -0.01
MSH6-215ENST00000622629 ME3Q16798 604 aa14.98□□□□□ -0.01
MSH6-215ENST00000622629 GNL3LQ9NVN8 582 aaKnown RBP14.98□□□□□ -0.01
MSH6-215ENST00000622629 IQSEC2Q5JU85 1478 aa14.97□□□□□ -0.01
MSH6-215ENST00000622629 IFIT3O14879 490 aaKnown RBP14.97□□□□□ -0.01
MSH6-215ENST00000622629 CTAGE5O15320 804 aa14.97□□□□□ -0.01
MSH6-215ENST00000622629 RPS6KB1P23443 525 aa14.97□□□□□ -0.01
MSH6-215ENST00000622629 ADCK5Q3MIX3 580 aa14.97□□□□□ -0.01
MSH6-215ENST00000622629 ZNF594Q96JF6 807 aaPredicted RBP14.97□□□□□ -0.01
MSH6-215ENST00000622629 A1BGP04217 495 aa14.97□□□□□ -0.01
MSH6-215ENST00000622629 IGHMBP2P38935 993 aaKnown RBP14.97□□□□□ -0.01
MSH6-215ENST00000622629 PDCL3Q9H2J4 239 aa14.97□□□□□ -0.01
MSH6-215ENST00000622629 CLTCQ00610 1675 aaKnown RBP14.97□□□□□ -0.01
MSH6-215ENST00000622629 A0A0D9SFI3 127 aa14.97□□□□□ -0.01
MSH6-215ENST00000622629 PTPN14Q15678 1187 aa14.97□□□□□ -0.01
MSH6-215ENST00000622629 PDCL2Q8N4E4 241 aa14.97□□□□□ -0.01
MSH6-215ENST00000622629 SLC52A2Q9HAB3 445 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms