RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 DRC1Q96MC2 740 aa6.61□□□□□ -1.35
CPNE4-214ENST00000617767 KIF2CQ99661 725 aa6.61□□□□□ -1.35
CPNE4-214ENST00000617767 UPF3BQ9BZI7 483 aaKnown RBP6.61□□□□□ -1.35
CPNE4-214ENST00000617767 RASSF4Q9H2L5 321 aa6.61□□□□□ -1.35
CPNE4-214ENST00000617767 DONSONQ9NYP3 566 aa6.61□□□□□ -1.35
CPNE4-214ENST00000617767 GTF2F1P35269 517 aaKnown RBP eCLIP6.61□□□□□ -1.35
CPNE4-214ENST00000617767 SART3Q15020 963 aaKnown RBP6.61□□□□□ -1.35
CPNE4-214ENST00000617767 EPHA10Q5JZY3 1008 aa6.61□□□□□ -1.35
CPNE4-214ENST00000617767 CASC1Q6TDU7 716 aa6.61□□□□□ -1.35
CPNE4-214ENST00000617767 CWC22Q9HCG8 908 aaKnown RBP6.61□□□□□ -1.35
CPNE4-214ENST00000617767 IGKV5-2P06315 115 aa6.61□□□□□ -1.35
CPNE4-214ENST00000617767 SETQ01105 290 aaPredicted RBP6.61□□□□□ -1.35
CPNE4-214ENST00000617767 BIRC2Q13490 618 aa6.61□□□□□ -1.35
CPNE4-214ENST00000617767 PDIA6Q15084 440 aa6.61□□□□□ -1.35
CPNE4-214ENST00000617767 EDC3Q96F86 508 aaKnown RBP6.61□□□□□ -1.35
CPNE4-214ENST00000617767 SUFUQ9UMX1 484 aa6.61□□□□□ -1.35
CPNE4-214ENST00000617767 CHGBP05060 677 aa6.6□□□□□ -1.35
CPNE4-214ENST00000617767 MCM5P33992 734 aa6.6□□□□□ -1.35
CPNE4-214ENST00000617767 NEXNQ0ZGT2 675 aa6.6□□□□□ -1.35
CPNE4-214ENST00000617767 NBPF9Q3BBW0 867 aa6.6□□□□□ -1.35
CPNE4-214ENST00000617767 ANKRD13DQ6ZTN6 518 aa6.6□□□□□ -1.35
CPNE4-214ENST00000617767 AACSQ86V21 672 aa6.6□□□□□ -1.35
CPNE4-214ENST00000617767 TNPO1Q92973 898 aaKnown RBP6.6□□□□□ -1.35
CPNE4-214ENST00000617767 ACSBG1Q96GR2 724 aa6.6□□□□□ -1.35
CPNE4-214ENST00000617767 NOL10Q9BSC4 688 aaKnown RBP6.6□□□□□ -1.35
CPNE4-214ENST00000617767 TLR7Q9NYK1 1049 aaKnown RBP6.6□□□□□ -1.35
CPNE4-214ENST00000617767 PALD1Q9ULE6 856 aa6.6□□□□□ -1.35
CPNE4-214ENST00000617767 ASAP1Q9ULH1 1129 aa6.6□□□□□ -1.35
CPNE4-214ENST00000617767 GRM8O00222 908 aa6.6□□□□□ -1.35
CPNE4-214ENST00000617767 DCAF5Q96JK2 942 aa6.6□□□□□ -1.35
CPNE4-214ENST00000617767 FMNL2Q96PY5 1086 aa6.6□□□□□ -1.35
CPNE4-214ENST00000617767 DDX21Q9NR30 783 aaKnown RBP eCLIP6.6□□□□□ -1.35
CPNE4-214ENST00000617767 DDX58O95786 925 aaKnown RBP6.59□□□□□ -1.35
CPNE4-214ENST00000617767 SNRPA1P09661 255 aaKnown RBP6.59□□□□□ -1.35
CPNE4-214ENST00000617767 CPA1P15085 419 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 GPTP24298 496 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 KCNQ4P56696 695 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 KIAA2012Q0VF49 1180 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 C10orf67Q8IYJ2 551 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 BOLA2Q9H3K6 86 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 HYPKQ9NX55 129 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 LMTK3Q96Q04 1460 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 CACNA1FO60840 1977 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 XIRP1Q702N8 1843 aaKnown RBP6.59□□□□□ -1.35
CPNE4-214ENST00000617767 SLIT3O75094 1523 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 CAMTA1Q9Y6Y1 1673 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 A0A087WZG4 1122 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 IFIT2P09913 472 aaKnown RBP6.59□□□□□ -1.35
CPNE4-214ENST00000617767 IL2RBP14784 551 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 NEK4P51957 841 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 PKP1Q13835 747 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 PIK3R5Q8WYR1 880 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 USP26Q9BXU7 913 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 LRRC37A3O60309 1634 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 IBTKQ9P2D0 1353 aaPredicted RBP6.59□□□□□ -1.35
CPNE4-214ENST00000617767 TRIM66O15016 1216 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 CTR9Q6PD62 1173 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 SYNE4Q8N205 404 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 SSH3Q8TE77 659 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 KAZALD1Q96I82 304 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 ZNF594Q96JF6 807 aaPredicted RBP6.59□□□□□ -1.35
CPNE4-214ENST00000617767 CXorf56Q9H5V9 222 aa6.59□□□□□ -1.35
CPNE4-214ENST00000617767 STRCQ7RTU9 1775 aa6.59□□□□□ -1.36
CPNE4-214ENST00000617767 ALS2Q96Q42 1657 aa6.59□□□□□ -1.36
CPNE4-214ENST00000617767 WDR17Q8IZU2 1322 aa6.59□□□□□ -1.36
CPNE4-214ENST00000617767 CCDC189A1A4V9 331 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 NBPF26B4DH59 902 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 MPHOSPH10O00566 681 aaKnown RBP6.58□□□□□ -1.36
CPNE4-214ENST00000617767 ERC2O15083 957 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 G3BP1Q13283 466 aaKnown RBP eCLIP6.58□□□□□ -1.36
CPNE4-214ENST00000617767 FAM182BQ5T319 152 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 NBPF14Q5TI25 921 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 NBPF10Q6P3W6 841 aaKnown RBP6.58□□□□□ -1.36
CPNE4-214ENST00000617767 SMIM5Q71RC9 77 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 ZGPATQ8N5A5 531 aaKnown RBP6.58□□□□□ -1.36
CPNE4-214ENST00000617767 NBPF15Q8N660 670 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 CCDC39Q9UFE4 941 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 NEURL1BA8MQ27 555 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 SSR1P43307 286 aaKnown RBP6.58□□□□□ -1.36
CPNE4-214ENST00000617767 SLFNL1Q499Z3 407 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 LRCH2Q5VUJ6 765 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 ANKRD7Q92527 254 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 PDLIM2Q96JY6 352 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 NEUROD6Q96NK8 337 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 BRMS1Q9HCU9 246 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 CLASRPQ8N2M8 674 aaKnown RBP6.58□□□□□ -1.36
CPNE4-214ENST00000617767 TMOD3Q9NYL9 352 aa6.58□□□□□ -1.36
CPNE4-214ENST00000617767 KDM3BQ7LBC6 1761 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 SSFA2P28290 1259 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 PPP2R5AQ15172 486 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 SKOR2Q2VWA4 1001 aaPredicted RBP6.57□□□□□ -1.36
CPNE4-214ENST00000617767 DNAJC10Q8IXB1 793 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 C17orf53Q8N3J3 647 aaPredicted RBP6.57□□□□□ -1.36
CPNE4-214ENST00000617767 OTUD6BQ8N6M0 293 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 LINS1Q8NG48 757 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 KIF1BPQ96EK5 621 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 TCEANC2Q96MN5 208 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 BABAM1Q9NWV8 329 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 KIF1AQ12756 1690 aa6.57□□□□□ -1.36
CPNE4-214ENST00000617767 LMO7Q8WWI1 1683 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms