RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 CNOT7Q9UIV1 285 aaKnown RBP12.77□□□□□ -0.37
SNX9-202ENST00000614703 RRP7AQ9Y3A4 280 aaKnown RBP12.77□□□□□ -0.37
SNX9-202ENST00000614703 ERBB4Q15303 1308 aa12.77□□□□□ -0.37
SNX9-202ENST00000614703 UBN2Q6ZU65 1347 aa12.77□□□□□ -0.37
SNX9-202ENST00000614703 DPF2Q92785 391 aa12.76□□□□□ -0.37
SNX9-202ENST00000614703 PCGF6Q9BYE7 350 aa12.76□□□□□ -0.37
SNX9-202ENST00000614703 ZBTB3Q9H5J0 574 aa12.76□□□□□ -0.37
SNX9-202ENST00000614703 ABCC4O15439 1325 aa12.75□□□□□ -0.37
SNX9-202ENST00000614703 RAD17O75943 681 aa12.75□□□□□ -0.37
SNX9-202ENST00000614703 SLC10A5Q5PT55 438 aa12.75□□□□□ -0.37
SNX9-202ENST00000614703 TTLL7Q6ZT98 887 aa12.75□□□□□ -0.37
SNX9-202ENST00000614703 USP48Q86UV5 1035 aa12.75□□□□□ -0.37
SNX9-202ENST00000614703 UTP14AQ9BVJ6 771 aaKnown RBP12.75□□□□□ -0.37
SNX9-202ENST00000614703 GBA2Q9HCG7 927 aaPredicted RBP12.75□□□□□ -0.37
SNX9-202ENST00000614703 MYL6BP14649 208 aa12.74□□□□□ -0.37
SNX9-202ENST00000614703 ZNF157P51786 506 aaPredicted RBP12.74□□□□□ -0.37
SNX9-202ENST00000614703 HIRAP54198 1017 aaPredicted RBP12.74□□□□□ -0.37
SNX9-202ENST00000614703 SOX10P56693 466 aa12.74□□□□□ -0.37
SNX9-202ENST00000614703 DCTN1Q14203 1278 aa12.74□□□□□ -0.37
SNX9-202ENST00000614703 HSP90AB3PQ58FF7 597 aa12.74□□□□□ -0.37
SNX9-202ENST00000614703 DDX46Q7L014 1031 aaKnown RBP12.74□□□□□ -0.37
SNX9-202ENST00000614703 KRT26Q7Z3Y9 468 aa12.74□□□□□ -0.37
SNX9-202ENST00000614703 CTU1Q7Z7A3 348 aaKnown RBP12.74□□□□□ -0.37
SNX9-202ENST00000614703 TRPM4Q8TD43 1214 aa12.74□□□□□ -0.37
SNX9-202ENST00000614703 DCPSQ96C86 337 aaKnown RBP12.74□□□□□ -0.37
SNX9-202ENST00000614703 ANKRD36CQ5JPF3 1778 aa12.74□□□□□ -0.37
SNX9-202ENST00000614703 KDM3BQ7LBC6 1761 aa12.74□□□□□ -0.37
SNX9-202ENST00000614703 RPS12P25398 132 aaKnown RBP12.73□□□□□ -0.37
SNX9-202ENST00000614703 CNGB1Q14028 1251 aaPredicted RBP12.73□□□□□ -0.37
SNX9-202ENST00000614703 PKN2Q16513 984 aaKnown RBP12.73□□□□□ -0.37
SNX9-202ENST00000614703 MICALL2Q8IY33 904 aa12.73□□□□□ -0.37
SNX9-202ENST00000614703 GCC1Q96CN9 775 aa12.73□□□□□ -0.37
SNX9-202ENST00000614703 POLR2AP24928 1970 aaKnown RBP12.72□□□□□ -0.37
SNX9-202ENST00000614703 FAM155AB1AL88 458 aaPredicted RBP12.72□□□□□ -0.37
SNX9-202ENST00000614703 TRPA1O75762 1119 aa12.72□□□□□ -0.37
SNX9-202ENST00000614703 EIF4A1P60842 406 aaKnown RBP12.72□□□□□ -0.37
SNX9-202ENST00000614703 KIF23Q02241 960 aaPredicted RBP12.72□□□□□ -0.37
SNX9-202ENST00000614703 RNF186Q9NXI6 227 aa12.72□□□□□ -0.37
SNX9-202ENST00000614703 MIS18AQ9NYP9 233 aa12.72□□□□□ -0.37
SNX9-202ENST00000614703 GRAPQ13588 217 aa12.71□□□□□ -0.37
SNX9-202ENST00000614703 C3orf67Q6ZVT6 689 aa12.71□□□□□ -0.37
SNX9-202ENST00000614703 SULF1Q8IWU6 871 aa12.71□□□□□ -0.37
SNX9-202ENST00000614703 GRAPLQ8TC17 118 aaPredicted RBP12.71□□□□□ -0.37
SNX9-202ENST00000614703 ZIC5Q96T25 663 aa12.71□□□□□ -0.37
SNX9-202ENST00000614703 WASHC4Q2M389 1173 aa12.7□□□□□ -0.38
SNX9-202ENST00000614703 LAMB2P55268 1798 aa12.7□□□□□ -0.38
SNX9-202ENST00000614703 DDX60Q8IY21 1712 aaKnown RBP12.7□□□□□ -0.38
SNX9-202ENST00000614703 DLG5Q8TDM6 1919 aa12.7□□□□□ -0.38
SNX9-202ENST00000614703 YDJCA8MPS7 323 aa12.69□□□□□ -0.38
SNX9-202ENST00000614703 SLC10A3P09131 477 aa12.69□□□□□ -0.38
SNX9-202ENST00000614703 TBC1D10BQ4KMP7 808 aaPredicted RBP12.69□□□□□ -0.38
SNX9-202ENST00000614703 SAMD7Q7Z3H4 446 aa12.69□□□□□ -0.38
SNX9-202ENST00000614703 EYA3Q99504 573 aa12.69□□□□□ -0.38
SNX9-202ENST00000614703 PNNQ9H307 717 aaKnown RBP12.69□□□□□ -0.38
SNX9-202ENST00000614703 SH3TC1Q8TE82 1336 aa12.68□□□□□ -0.38
SNX9-202ENST00000614703 PSMD14O00487 310 aa12.68□□□□□ -0.38
SNX9-202ENST00000614703 FKBP1BP68106 108 aa12.68□□□□□ -0.38
SNX9-202ENST00000614703 SLC51AQ86UW1 340 aa12.68□□□□□ -0.38
SNX9-202ENST00000614703 CSRNP1Q96S65 589 aa12.68□□□□□ -0.38
SNX9-202ENST00000614703 TRMT112Q9UI30 125 aaKnown RBP12.68□□□□□ -0.38
SNX9-202ENST00000614703 HDAC9Q9UKV0 1011 aa12.68□□□□□ -0.38
SNX9-202ENST00000614703 ZBTB12Q9Y330 459 aaPredicted RBP12.68□□□□□ -0.38
SNX9-202ENST00000614703 HPS5Q9UPZ3 1129 aa12.67□□□□□ -0.38
SNX9-202ENST00000614703 LRRC37AA6NMS7 1700 aa12.67□□□□□ -0.38
SNX9-202ENST00000614703 SHTN1A0MZ66 631 aa12.66□□□□□ -0.38
SNX9-202ENST00000614703 ADM5C9JUS6 153 aa12.66□□□□□ -0.38
SNX9-202ENST00000614703 C6orf229H3BNL8 230 aa12.66□□□□□ -0.38
SNX9-202ENST00000614703 HCLS1P14317 486 aaPredicted RBP12.66□□□□□ -0.38
SNX9-202ENST00000614703 PPP2R1AP30153 589 aa12.66□□□□□ -0.38
SNX9-202ENST00000614703 KIF4BQ2VIQ3 1234 aa12.66□□□□□ -0.38
SNX9-202ENST00000614703 RBM26Q5T8P6 1007 aaKnown RBP12.66□□□□□ -0.38
SNX9-202ENST00000614703 NLRP10Q86W26 655 aa12.66□□□□□ -0.38
SNX9-202ENST00000614703 NECTIN2Q92692 538 aa12.66□□□□□ -0.38
SNX9-202ENST00000614703 DBNDD1Q9H9R9 158 aa12.66□□□□□ -0.38
SNX9-202ENST00000614703 NSFL1CQ9UNZ2 370 aaKnown RBP12.66□□□□□ -0.38
SNX9-202ENST00000614703 G3V3G9 751 aa12.65□□□□□ -0.38
SNX9-202ENST00000614703 EIF2S2P20042 333 aaKnown RBP12.65□□□□□ -0.38
SNX9-202ENST00000614703 TCIRG1Q13488 830 aa12.65□□□□□ -0.38
SNX9-202ENST00000614703 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
SNX9-202ENST00000614703 NOM1Q5C9Z4 860 aaKnown RBP12.65□□□□□ -0.38
SNX9-202ENST00000614703 DCAF8Q5TAQ9 597 aa12.65□□□□□ -0.38
SNX9-202ENST00000614703 CCER1Q8TC90 406 aaPredicted RBP12.65□□□□□ -0.38
SNX9-202ENST00000614703 BABAM1Q9NWV8 329 aa12.65□□□□□ -0.38
SNX9-202ENST00000614703 GGA3Q9NZ52 723 aa12.65□□□□□ -0.38
SNX9-202ENST00000614703 TSPYL4Q9UJ04 414 aa12.65□□□□□ -0.38
SNX9-202ENST00000614703 DUOX1Q9NRD9 1551 aa12.64□□□□□ -0.39
SNX9-202ENST00000614703 MAPK8IP3Q9UPT6 1336 aa12.64□□□□□ -0.39
SNX9-202ENST00000614703 ECE2O60344 883 aa12.64□□□□□ -0.39
SNX9-202ENST00000614703 RASAL3Q86YV0 1011 aa12.64□□□□□ -0.39
SNX9-202ENST00000614703 CDCA5Q96FF9 252 aa12.64□□□□□ -0.39
SNX9-202ENST00000614703 ZC3H12CQ9C0D7 883 aaKnown RBP12.64□□□□□ -0.39
SNX9-202ENST00000614703 PAPPA2Q9BXP8 1791 aa12.64□□□□□ -0.39
SNX9-202ENST00000614703 RIMBP2O15034 1052 aa12.63□□□□□ -0.39
SNX9-202ENST00000614703 VIL1P09327 827 aaKnown RBP12.63□□□□□ -0.39
SNX9-202ENST00000614703 HSP90B1P14625 803 aaKnown RBP12.63□□□□□ -0.39
SNX9-202ENST00000614703 FBXO46Q6PJ61 603 aaPredicted RBP12.63□□□□□ -0.39
SNX9-202ENST00000614703 DLK2Q6UY11 383 aa12.63□□□□□ -0.39
SNX9-202ENST00000614703 COPS6Q7L5N1 327 aa12.63□□□□□ -0.39
SNX9-202ENST00000614703 LRP10Q7Z4F1 713 aa12.63□□□□□ -0.39
SNX9-202ENST00000614703 THUMPD2Q9BTF0 503 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms