RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 SNCBQ16143 134 aa15.67■□□□□ 0.1
CHD1-212ENST00000614616 DBN1Q16643 649 aa15.67■□□□□ 0.1
CHD1-212ENST00000614616 MINK1Q8N4C8 1332 aaPredicted RBP15.67■□□□□ 0.1
CHD1-212ENST00000614616 ZNF569Q5MCW4 686 aa15.66■□□□□ 0.1
CHD1-212ENST00000614616 NCAPD3P42695 1498 aa15.66■□□□□ 0.1
CHD1-212ENST00000614616 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
CHD1-212ENST00000614616 ZMAT2Q96NC0 199 aaKnown RBP15.66■□□□□ 0.1
CHD1-212ENST00000614616 F13A1P00488 732 aa15.66■□□□□ 0.1
CHD1-212ENST00000614616 ALDH3A1P30838 453 aa15.66■□□□□ 0.1
CHD1-212ENST00000614616 PPP1R14CQ8TAE6 165 aa15.66■□□□□ 0.1
CHD1-212ENST00000614616 RRP15Q9Y3B9 282 aaKnown RBP15.66■□□□□ 0.1
CHD1-212ENST00000614616 RMND1Q9NWS8 449 aa15.66■□□□□ 0.1
CHD1-212ENST00000614616 TOP2BQ02880 1626 aa15.66■□□□□ 0.1
CHD1-212ENST00000614616 PEX19P40855 299 aa15.66■□□□□ 0.1
CHD1-212ENST00000614616 CERS3Q8IU89 383 aa15.66■□□□□ 0.1
CHD1-212ENST00000614616 BAG1Q99933 345 aaPredicted RBP15.66■□□□□ 0.1
CHD1-212ENST00000614616 CFTRP13569 1480 aa15.65■□□□□ 0.1
CHD1-212ENST00000614616 BRD3Q15059 726 aa15.65■□□□□ 0.1
CHD1-212ENST00000614616 GBP7Q8N8V2 638 aaPredicted RBP15.65■□□□□ 0.1
CHD1-212ENST00000614616 HMG20BQ9P0W2 317 aa15.65■□□□□ 0.1
CHD1-212ENST00000614616 CFAP58Q5T655 872 aa15.65■□□□□ 0.1
CHD1-212ENST00000614616 ZMYM4Q5VZL5 1548 aa15.65■□□□□ 0.1
CHD1-212ENST00000614616 PRPHP41219 470 aa15.65■□□□□ 0.1
CHD1-212ENST00000614616 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.65■□□□□ 0.1
CHD1-212ENST00000614616 DACT1Q9NYF0 836 aa15.65■□□□□ 0.1
CHD1-212ENST00000614616 JRKLQ9Y4A0 524 aa15.65■□□□□ 0.1
CHD1-212ENST00000614616 CC2D2AQ9P2K1 1620 aa15.65■□□□□ 0.1
CHD1-212ENST00000614616 N4BP3O15049 544 aa15.65■□□□□ 0.1
CHD1-212ENST00000614616 RTL1A6NKG5 1358 aa15.65■□□□□ 0.1
CHD1-212ENST00000614616 CAMSAP2Q08AD1 1489 aa15.65■□□□□ 0.1
CHD1-212ENST00000614616 PPFIA3O75145 1194 aa15.65■□□□□ 0.1
CHD1-212ENST00000614616 ISM2Q6H9L7 571 aa15.64■□□□□ 0.09
CHD1-212ENST00000614616 MPHOSPH8Q99549 860 aa15.64■□□□□ 0.09
CHD1-212ENST00000614616 MED4Q9NPJ6 270 aa15.64■□□□□ 0.09
CHD1-212ENST00000614616 FERP16591 822 aa15.64■□□□□ 0.09
CHD1-212ENST00000614616 NUTM2DQ5VT03 806 aaPredicted RBP15.64■□□□□ 0.09
CHD1-212ENST00000614616 ANKRD36BQ8N2N9 1353 aa15.64■□□□□ 0.09
CHD1-212ENST00000614616 RPUSD2Q8IZ73 545 aaKnown RBP15.64■□□□□ 0.09
CHD1-212ENST00000614616 CAPZA3Q96KX2 299 aa15.64■□□□□ 0.09
CHD1-212ENST00000614616 ZBTB12Q9Y330 459 aaPredicted RBP15.64■□□□□ 0.09
CHD1-212ENST00000614616 NEDD9Q14511 834 aa15.64■□□□□ 0.09
CHD1-212ENST00000614616 CCDC40Q4G0X9 1142 aa15.64■□□□□ 0.09
CHD1-212ENST00000614616 CCDC77Q9BR77 488 aa15.64■□□□□ 0.09
CHD1-212ENST00000614616 UTP14AQ9BVJ6 771 aaKnown RBP15.64■□□□□ 0.09
CHD1-212ENST00000614616 DDX27Q96GQ7 796 aaKnown RBP15.64■□□□□ 0.09
CHD1-212ENST00000614616 LZTFL1Q9NQ48 299 aa15.64■□□□□ 0.09
CHD1-212ENST00000614616 CFAP43Q8NDM7 1665 aa15.64■□□□□ 0.09
CHD1-212ENST00000614616 CCDC110Q8TBZ0 833 aa15.63■□□□□ 0.09
CHD1-212ENST00000614616 FAM114A2Q9NRY5 505 aa15.63■□□□□ 0.09
CHD1-212ENST00000614616 RASSF2P50749 326 aa15.63■□□□□ 0.09
CHD1-212ENST00000614616 SMARCC2Q8TAQ2 1214 aa15.63■□□□□ 0.09
CHD1-212ENST00000614616 RAB3IL1Q8TBN0 382 aa15.63■□□□□ 0.09
CHD1-212ENST00000614616 SEC62Q99442 399 aaKnown RBP15.63■□□□□ 0.09
CHD1-212ENST00000614616 IQCGQ9H095 443 aaKnown RBP15.63■□□□□ 0.09
CHD1-212ENST00000614616 DNM1Q05193 864 aaKnown RBP15.63■□□□□ 0.09
CHD1-212ENST00000614616 SSH1Q8WYL5 1049 aa15.63■□□□□ 0.09
CHD1-212ENST00000614616 IFNKQ9P0W0 207 aa15.63■□□□□ 0.09
CHD1-212ENST00000614616 ANAPC4Q9UJX5 808 aa15.63■□□□□ 0.09
CHD1-212ENST00000614616 TRIM27P14373 513 aa15.63■□□□□ 0.09
CHD1-212ENST00000614616 NAPGQ99747 312 aaPredicted RBP15.63■□□□□ 0.09
CHD1-212ENST00000614616 UBLCP1Q8WVY7 318 aaPredicted RBP15.63■□□□□ 0.09
CHD1-212ENST00000614616 AMPD3Q01432 767 aa15.62■□□□□ 0.09
CHD1-212ENST00000614616 SOGA3Q5TF21 947 aa15.62■□□□□ 0.09
CHD1-212ENST00000614616 CNGA4Q8IV77 575 aa15.62■□□□□ 0.09
CHD1-212ENST00000614616 TMPOP42166 694 aaKnown RBP15.62■□□□□ 0.09
CHD1-212ENST00000614616 ASXL1Q8IXJ9 1541 aa15.62■□□□□ 0.09
CHD1-212ENST00000614616 IFT20Q8IY31 132 aa15.62■□□□□ 0.09
CHD1-212ENST00000614616 PFDN1O60925 122 aa15.62■□□□□ 0.09
CHD1-212ENST00000614616 GIGYF1O75420 1035 aaPredicted RBP15.62■□□□□ 0.09
CHD1-212ENST00000614616 IFT81Q8WYA0 676 aa15.62■□□□□ 0.09
CHD1-212ENST00000614616 EXOC6BQ9Y2D4 811 aa15.62■□□□□ 0.09
CHD1-212ENST00000614616 LRRD1A4D1F6 860 aa15.62■□□□□ 0.09
CHD1-212ENST00000614616 VIMP08670 466 aaKnown RBP15.62■□□□□ 0.09
CHD1-212ENST00000614616 HPDP32754 393 aaPredicted RBP15.62■□□□□ 0.09
CHD1-212ENST00000614616 SERPINA10Q9UK55 444 aa15.62■□□□□ 0.09
CHD1-212ENST00000614616 KIF14Q15058 1648 aa15.62■□□□□ 0.09
CHD1-212ENST00000614616 PTPRCP08575 1304 aa15.62■□□□□ 0.09
CHD1-212ENST00000614616 SSRP1Q08945 709 aaKnown RBP15.62■□□□□ 0.09
CHD1-212ENST00000614616 NLRP5P59047 1200 aa15.62■□□□□ 0.09
CHD1-212ENST00000614616 LRRC23Q53EV4 343 aaPredicted RBP15.62■□□□□ 0.09
CHD1-212ENST00000614616 NEK11Q8NG66 645 aa15.62■□□□□ 0.09
CHD1-212ENST00000614616 SMARCA5O60264 1052 aaPredicted RBP15.61■□□□□ 0.09
CHD1-212ENST00000614616 GUCY1B3Q02153 619 aa15.61■□□□□ 0.09
CHD1-212ENST00000614616 TEX2Q8IWB9 1127 aa15.61■□□□□ 0.09
CHD1-212ENST00000614616 EID1Q9Y6B2 187 aa15.61■□□□□ 0.09
CHD1-212ENST00000614616 SMIM24O75264 130 aa15.61■□□□□ 0.09
CHD1-212ENST00000614616 JAKMIP2Q96AA8 810 aa15.61■□□□□ 0.09
CHD1-212ENST00000614616 SPAG1Q07617 926 aa15.61■□□□□ 0.09
CHD1-212ENST00000614616 FAM71BQ8TC56 605 aa15.61■□□□□ 0.09
CHD1-212ENST00000614616 PLCB1Q9NQ66 1216 aa15.61■□□□□ 0.09
CHD1-212ENST00000614616 FAM135AQ9P2D6 1515 aa15.61■□□□□ 0.09
CHD1-212ENST00000614616 CETN3O15182 167 aa15.61■□□□□ 0.09
CHD1-212ENST00000614616 WDHD1O75717 1129 aaPredicted RBP15.61■□□□□ 0.09
CHD1-212ENST00000614616 RAB34Q9BZG1 259 aa15.61■□□□□ 0.09
CHD1-212ENST00000614616 WWC2Q6AWC2 1192 aa15.61■□□□□ 0.09
CHD1-212ENST00000614616 ARHGAP24Q8N264 748 aa15.61■□□□□ 0.09
CHD1-212ENST00000614616 N4BP2L2Q92802 583 aaPredicted RBP15.61■□□□□ 0.09
CHD1-212ENST00000614616 ODF2LQ9ULJ1 636 aa15.61■□□□□ 0.09
CHD1-212ENST00000614616 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.61■□□□□ 0.09
CHD1-212ENST00000614616 MUM1Q2TAK8 710 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms