RNA–Protein interactions for RNA: ENST00000613941.4

SRSF3-204, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 4

Gene SRSF3, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-204ENST00000613941 GAS2L2Q8NHY3 880 aa14.18□□□□□ -0.14
SRSF3-204ENST00000613941 KDM3BQ7LBC6 1761 aa14.18□□□□□ -0.14
SRSF3-204ENST00000613941 TRIOBPQ9H2D6 2365 aa14.18□□□□□ -0.14
SRSF3-204ENST00000613941 COL3A1P02461 1466 aaPredicted RBP14.18□□□□□ -0.14
SRSF3-204ENST00000613941 H7C1D1 291 aa14.17□□□□□ -0.14
SRSF3-204ENST00000613941 TBC1D8O95759 1140 aa14.17□□□□□ -0.14
SRSF3-204ENST00000613941 SNRPA1P09661 255 aaKnown RBP14.17□□□□□ -0.14
SRSF3-204ENST00000613941 TNIP1Q15025 636 aa14.17□□□□□ -0.14
SRSF3-204ENST00000613941 PKN2Q16513 984 aaKnown RBP14.17□□□□□ -0.14
SRSF3-204ENST00000613941 RASAL3Q86YV0 1011 aa14.17□□□□□ -0.14
SRSF3-204ENST00000613941 ATP6V0A2Q9Y487 856 aa14.17□□□□□ -0.14
SRSF3-204ENST00000613941 PSME4Q14997 1843 aa14.17□□□□□ -0.14
SRSF3-204ENST00000613941 ABCC4O15439 1325 aa14.16□□□□□ -0.14
SRSF3-204ENST00000613941 CEP290O15078 2479 aa14.16□□□□□ -0.14
SRSF3-204ENST00000613941 RGL2O15211 777 aa14.16□□□□□ -0.14
SRSF3-204ENST00000613941 RBM26Q5T8P6 1007 aaKnown RBP14.16□□□□□ -0.14
SRSF3-204ENST00000613941 SUSD4Q5VX71 490 aa14.16□□□□□ -0.14
SRSF3-204ENST00000613941 SUPT20HQ8NEM7 779 aa14.16□□□□□ -0.14
SRSF3-204ENST00000613941 RTFDC1Q9BY42 306 aaPredicted RBP14.16□□□□□ -0.14
SRSF3-204ENST00000613941 IBTKQ9P2D0 1353 aaPredicted RBP14.15□□□□□ -0.14
SRSF3-204ENST00000613941 U2SURPO15042 1029 aaKnown RBP14.15□□□□□ -0.14
SRSF3-204ENST00000613941 KIAA2012Q0VF49 1180 aa14.15□□□□□ -0.14
SRSF3-204ENST00000613941 FBXO46Q6PJ61 603 aaPredicted RBP14.15□□□□□ -0.14
SRSF3-204ENST00000613941 DPP8Q6V1X1 898 aaPredicted RBP14.15□□□□□ -0.14
SRSF3-204ENST00000613941 TMX4Q9H1E5 349 aaPredicted RBP14.15□□□□□ -0.14
SRSF3-204ENST00000613941 VPS33BQ9H267 617 aa14.15□□□□□ -0.14
SRSF3-204ENST00000613941 KNSTRNQ9Y448 316 aa14.15□□□□□ -0.14
SRSF3-204ENST00000613941 ASTN2O75129 1339 aaPredicted RBP14.15□□□□□ -0.15
SRSF3-204ENST00000613941 POTEFA5A3E0 1075 aa14.14□□□□□ -0.15
SRSF3-204ENST00000613941 NTSR2O95665 410 aa14.14□□□□□ -0.15
SRSF3-204ENST00000613941 TTLL7Q6ZT98 887 aa14.14□□□□□ -0.15
SRSF3-204ENST00000613941 DCPSQ96C86 337 aaKnown RBP14.14□□□□□ -0.15
SRSF3-204ENST00000613941 MAP3K15Q6ZN16 1313 aa14.14□□□□□ -0.15
SRSF3-204ENST00000613941 PSMD14O00487 310 aa14.13□□□□□ -0.15
SRSF3-204ENST00000613941 MPNDQ8N594 471 aa14.13□□□□□ -0.15
SRSF3-204ENST00000613941 ZBTB3Q9H5J0 574 aa14.13□□□□□ -0.15
SRSF3-204ENST00000613941 GGA3Q9NZ52 723 aa14.13□□□□□ -0.15
SRSF3-204ENST00000613941 COL4A1P02462 1669 aa14.12□□□□□ -0.15
SRSF3-204ENST00000613941 AMER1Q5JTC6 1135 aaPredicted RBP14.12□□□□□ -0.15
SRSF3-204ENST00000613941 MCM10Q7L590 875 aa14.12□□□□□ -0.15
SRSF3-204ENST00000613941 CDCA5Q96FF9 252 aa14.12□□□□□ -0.15
SRSF3-204ENST00000613941 GPR25O00155 361 aa14.11□□□□□ -0.15
SRSF3-204ENST00000613941 MOB2Q70IA6 237 aa14.11□□□□□ -0.15
SRSF3-204ENST00000613941 PHACTR3Q96KR7 559 aa14.11□□□□□ -0.15
SRSF3-204ENST00000613941 DBNDD1Q9H9R9 158 aa14.11□□□□□ -0.15
SRSF3-204ENST00000613941 LAMB1P07942 1786 aa14.1□□□□□ -0.15
SRSF3-204ENST00000613941 ERVV-1B6SEH8 477 aa14.1□□□□□ -0.15
SRSF3-204ENST00000613941 DLL1O00548 723 aa14.1□□□□□ -0.15
SRSF3-204ENST00000613941 MKRN3Q13064 507 aaKnown RBP14.1□□□□□ -0.15
SRSF3-204ENST00000613941 KIF4BQ2VIQ3 1234 aa14.1□□□□□ -0.15
SRSF3-204ENST00000613941 KIF6Q6ZMV9 814 aa14.1□□□□□ -0.15
SRSF3-204ENST00000613941 SULF1Q8IWU6 871 aa14.1□□□□□ -0.15
SRSF3-204ENST00000613941 DPF2Q92785 391 aa14.1□□□□□ -0.15
SRSF3-204ENST00000613941 NLRP3Q96P20 1036 aa14.1□□□□□ -0.15
SRSF3-204ENST00000613941 COLQQ9Y215 455 aaPredicted RBP14.1□□□□□ -0.15
SRSF3-204ENST00000613941 COL6A3P12111 3177 aa14.09□□□□□ -0.15
SRSF3-204ENST00000613941 MYL6BP14649 208 aa14.09□□□□□ -0.15
SRSF3-204ENST00000613941 DCTN1Q14203 1278 aa14.09□□□□□ -0.15
SRSF3-204ENST00000613941 SP8Q8IXZ3 490 aa14.09□□□□□ -0.15
SRSF3-204ENST00000613941 REM2Q8IYK8 340 aaPredicted RBP14.09□□□□□ -0.15
SRSF3-204ENST00000613941 ZNF34Q8IZ26 560 aa14.09□□□□□ -0.15
SRSF3-204ENST00000613941 R3HDMLQ9H3Y0 253 aa14.09□□□□□ -0.15
SRSF3-204ENST00000613941 KCNQ5Q9NR82 932 aa14.09□□□□□ -0.15
SRSF3-204ENST00000613941 SCAF8Q9UPN6 1271 aaKnown RBP14.09□□□□□ -0.15
SRSF3-204ENST00000613941 RRP7AQ9Y3A4 280 aaKnown RBP14.09□□□□□ -0.15
SRSF3-204ENST00000613941 RIMBP2O15034 1052 aa14.08□□□□□ -0.16
SRSF3-204ENST00000613941 HSPA5P11021 654 aaKnown RBP14.08□□□□□ -0.16
SRSF3-204ENST00000613941 PRKAR2BP31323 418 aa14.08□□□□□ -0.16
SRSF3-204ENST00000613941 MIS18AQ9NYP9 233 aa14.08□□□□□ -0.16
SRSF3-204ENST00000613941 RTL9Q8NET4 1388 aa14.08□□□□□ -0.16
SRSF3-204ENST00000613941 CC2D1BQ5T0F9 858 aaKnown RBP14.07□□□□□ -0.16
SRSF3-204ENST00000613941 ZNF646O15015 1829 aaPredicted RBP14.06□□□□□ -0.16
SRSF3-204ENST00000613941 UBE2Q2LH0YL09 131 aa14.06□□□□□ -0.16
SRSF3-204ENST00000613941 FKTNO75072 461 aa14.06□□□□□ -0.16
SRSF3-204ENST00000613941 CNGB1Q14028 1251 aaPredicted RBP14.06□□□□□ -0.16
SRSF3-204ENST00000613941 ANGEL2Q5VTE6 544 aaKnown RBP14.06□□□□□ -0.16
SRSF3-204ENST00000613941 PPP1R42Q7Z4L9 355 aa14.06□□□□□ -0.16
SRSF3-204ENST00000613941 ECE2O60344 883 aa14.05□□□□□ -0.16
SRSF3-204ENST00000613941 BBOX1O75936 387 aa14.05□□□□□ -0.16
SRSF3-204ENST00000613941 HCLS1P14317 486 aaPredicted RBP14.05□□□□□ -0.16
SRSF3-204ENST00000613941 EN2P19622 333 aaPredicted RBP14.05□□□□□ -0.16
SRSF3-204ENST00000613941 DOK7Q18PE1 504 aa14.05□□□□□ -0.16
SRSF3-204ENST00000613941 RTF1Q92541 710 aaKnown RBP14.05□□□□□ -0.16
SRSF3-204ENST00000613941 TRIM17Q9Y577 477 aa14.05□□□□□ -0.16
SRSF3-204ENST00000613941 RPS12P25398 132 aaKnown RBP14.04□□□□□ -0.16
SRSF3-204ENST00000613941 GRAPQ13588 217 aa14.04□□□□□ -0.16
SRSF3-204ENST00000613941 WASHC4Q2M389 1173 aa14.04□□□□□ -0.16
SRSF3-204ENST00000613941 GIGYF2Q6Y7W6 1299 aaKnown RBP14.04□□□□□ -0.16
SRSF3-204ENST00000613941 GRAPLQ8TC17 118 aaPredicted RBP14.04□□□□□ -0.16
SRSF3-204ENST00000613941 ZNF428Q96B54 188 aa14.04□□□□□ -0.16
SRSF3-204ENST00000613941 RSPH6AQ9H0K4 717 aa14.04□□□□□ -0.16
SRSF3-204ENST00000613941 SPEF2Q9C093 1822 aa14.04□□□□□ -0.16
SRSF3-204ENST00000613941 A0A0C4DFX4 3053 aa14.04□□□□□ -0.16
SRSF3-204ENST00000613941 TM4SF4P48230 202 aa14.03□□□□□ -0.16
SRSF3-204ENST00000613941 NOM1Q5C9Z4 860 aaKnown RBP14.03□□□□□ -0.16
SRSF3-204ENST00000613941 PRAMEF18Q5VWM3 479 aa14.03□□□□□ -0.16
SRSF3-204ENST00000613941 DDX46Q7L014 1031 aaKnown RBP14.03□□□□□ -0.16
SRSF3-204ENST00000613941 UTP14AQ9BVJ6 771 aaKnown RBP14.03□□□□□ -0.16
SRSF3-204ENST00000613941 ZSWIM8A7E2V4 1837 aa14.03□□□□□ -0.16
SRSF3-204ENST00000613941 CUL9Q8IWT3 2517 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms