RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 SYT17Q9BSW7 474 aa6.36□□□□□ -1.39
SYCP1-209ENST00000613524 ABCC6O95255 1503 aa6.35□□□□□ -1.39
SYCP1-209ENST00000613524 SNRPA1P09661 255 aaKnown RBP6.35□□□□□ -1.39
SYCP1-209ENST00000613524 GUCA2AQ02747 115 aa6.35□□□□□ -1.39
SYCP1-209ENST00000613524 HLFQ16534 295 aa6.35□□□□□ -1.39
SYCP1-209ENST00000613524 INTS5Q6P9B9 1019 aaKnown RBP6.35□□□□□ -1.39
SYCP1-209ENST00000613524 SYNE4Q8N205 404 aa6.35□□□□□ -1.39
SYCP1-209ENST00000613524 RBM19Q9Y4C8 960 aaKnown RBP6.35□□□□□ -1.39
SYCP1-209ENST00000613524 PARP3Q9Y6F1 533 aa6.35□□□□□ -1.39
SYCP1-209ENST00000613524 TOGARAM1Q9Y4F4 1720 aa6.35□□□□□ -1.39
SYCP1-209ENST00000613524 TTLL13PA6NNM8 815 aa6.35□□□□□ -1.39
SYCP1-209ENST00000613524 EIF5BO60841 1220 aaKnown RBP6.35□□□□□ -1.39
SYCP1-209ENST00000613524 CLCN1P35523 988 aa6.35□□□□□ -1.39
SYCP1-209ENST00000613524 DUSP27Q5VZP5 1158 aa6.35□□□□□ -1.39
SYCP1-209ENST00000613524 PHAXQ9H814 394 aaKnown RBP6.35□□□□□ -1.39
SYCP1-209ENST00000613524 NIP7Q9Y221 180 aaKnown RBP eCLIP6.35□□□□□ -1.39
SYCP1-209ENST00000613524 TNS1Q9HBL0 1735 aaKnown RBP6.35□□□□□ -1.39
SYCP1-209ENST00000613524 ITGB4P16144 1822 aa6.35□□□□□ -1.39
SYCP1-209ENST00000613524 MOXD2PA6NHM9 499 aa6.34□□□□□ -1.39
SYCP1-209ENST00000613524 NBPF26B4DH59 902 aa6.34□□□□□ -1.39
SYCP1-209ENST00000613524 EXOSC9Q06265 439 aaKnown RBP6.34□□□□□ -1.39
SYCP1-209ENST00000613524 TBC1D9BQ66K14 1250 aa6.34□□□□□ -1.39
SYCP1-209ENST00000613524 NBPF10Q6P3W6 841 aaKnown RBP6.34□□□□□ -1.39
SYCP1-209ENST00000613524 COPS6Q7L5N1 327 aa6.34□□□□□ -1.39
SYCP1-209ENST00000613524 NBPF15Q8N660 670 aa6.34□□□□□ -1.39
SYCP1-209ENST00000613524 PDCD7Q8N8D1 485 aaKnown RBP6.34□□□□□ -1.39
SYCP1-209ENST00000613524 RGPD1P0DJD0 1748 aa6.34□□□□□ -1.39
SYCP1-209ENST00000613524 EVI5O60447 810 aa6.34□□□□□ -1.39
SYCP1-209ENST00000613524 OLFM4Q6UX06 510 aa6.34□□□□□ -1.39
SYCP1-209ENST00000613524 DHX37Q8IY37 1157 aaKnown RBP6.34□□□□□ -1.39
SYCP1-209ENST00000613524 XAGE3Q8WTP9 111 aa6.34□□□□□ -1.39
SYCP1-209ENST00000613524 TSC1Q92574 1164 aa6.34□□□□□ -1.39
SYCP1-209ENST00000613524 GYS1P13807 737 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 PTGER2P43116 358 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 EIF4A1P60842 406 aaKnown RBP6.33□□□□□ -1.4
SYCP1-209ENST00000613524 LMOD3Q0VAK6 560 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 NBPF5PQ86XG9 351 aaPredicted RBP6.33□□□□□ -1.4
SYCP1-209ENST00000613524 WWC1Q8IX03 1113 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 STK32AQ8WU08 396 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 FRAT1Q92837 279 aaPredicted RBP6.33□□□□□ -1.4
SYCP1-209ENST00000613524 SHANK3Q9BYB0 1731 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 HEG1Q9ULI3 1381 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 WNK3Q9BYP7 1800 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 F6X3S4 739 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 GIGYF1O75420 1035 aaPredicted RBP6.33□□□□□ -1.4
SYCP1-209ENST00000613524 RPS6KA4O75676 772 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 NFIXQ14938 502 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 CHMP3Q9Y3E7 222 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 COL15A1P39059 1388 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 PALM3A6NDB9 673 aaPredicted RBP6.33□□□□□ -1.4
SYCP1-209ENST00000613524 NEFLP07196 543 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 HCLS1P14317 486 aaPredicted RBP6.33□□□□□ -1.4
SYCP1-209ENST00000613524 DDR1Q08345 913 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 KIF6Q6ZMV9 814 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 ARHGAP27Q6ZUM4 889 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 RIC3Q7Z5B4 369 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 PBXIP1Q96AQ6 731 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 SETDB2Q96T68 719 aa6.33□□□□□ -1.4
SYCP1-209ENST00000613524 PADI6Q6TGC4 694 aa6.32□□□□□ -1.4
SYCP1-209ENST00000613524 TFIP11Q9UBB9 837 aaKnown RBP6.32□□□□□ -1.4
SYCP1-209ENST00000613524 MYH14Q7Z406 1995 aaKnown RBP6.32□□□□□ -1.4
SYCP1-209ENST00000613524 TMEM88BA6NKF7 163 aa6.32□□□□□ -1.4
SYCP1-209ENST00000613524 DPEP1P16444 411 aa6.32□□□□□ -1.4
SYCP1-209ENST00000613524 FKBP5Q13451 457 aaPredicted RBP6.32□□□□□ -1.4
SYCP1-209ENST00000613524 G2E3Q7L622 706 aa6.32□□□□□ -1.4
SYCP1-209ENST00000613524 NHSQ6T4R5 1651 aa6.31□□□□□ -1.4
SYCP1-209ENST00000613524 USP54Q70EL1 1684 aa6.31□□□□□ -1.4
SYCP1-209ENST00000613524 SERPINB2P05120 415 aa6.31□□□□□ -1.4
SYCP1-209ENST00000613524 TWISTNBQ3B726 338 aaPredicted RBP6.31□□□□□ -1.4
SYCP1-209ENST00000613524 SSFA2P28290 1259 aa6.31□□□□□ -1.4
SYCP1-209ENST00000613524 CNBD1Q8NA66 436 aa6.31□□□□□ -1.4
SYCP1-209ENST00000613524 LRRN4Q8WUT4 740 aa6.31□□□□□ -1.4
SYCP1-209ENST00000613524 FAM89AQ96GI7 184 aa6.31□□□□□ -1.4
SYCP1-209ENST00000613524 MYD88Q99836 296 aa6.31□□□□□ -1.4
SYCP1-209ENST00000613524 STK31Q9BXU1 1019 aa6.31□□□□□ -1.4
SYCP1-209ENST00000613524 KIF3CO14782 793 aa6.31□□□□□ -1.4
SYCP1-209ENST00000613524 SERPINB4P48594 390 aa6.31□□□□□ -1.4
SYCP1-209ENST00000613524 GNAI1P63096 354 aa6.31□□□□□ -1.4
SYCP1-209ENST00000613524 USP42Q9H9J4 1324 aaKnown RBP6.3□□□□□ -1.4
SYCP1-209ENST00000613524 FANCIQ9NVI1 1328 aa6.3□□□□□ -1.4
SYCP1-209ENST00000613524 USP17L8P0C7I0 530 aa6.3□□□□□ -1.4
SYCP1-209ENST00000613524 YBX3P16989 372 aaKnown RBP eCLIP6.3□□□□□ -1.4
SYCP1-209ENST00000613524 YY1P25490 414 aa6.3□□□□□ -1.4
SYCP1-209ENST00000613524 CWF19L2Q2TBE0 894 aaKnown RBP6.3□□□□□ -1.4
SYCP1-209ENST00000613524 SND1Q7KZF4 910 aaKnown RBP eCLIP6.3□□□□□ -1.4
SYCP1-209ENST00000613524 NLGN1Q8N2Q7 840 aa6.3□□□□□ -1.4
SYCP1-209ENST00000613524 PPP1R12CQ9BZL4 782 aa6.3□□□□□ -1.4
SYCP1-209ENST00000613524 DLG5Q8TDM6 1919 aa6.3□□□□□ -1.4
SYCP1-209ENST00000613524 NUP188Q5SRE5 1749 aa6.3□□□□□ -1.4
SYCP1-209ENST00000613524 SOS1Q07889 1333 aaPredicted RBP6.3□□□□□ -1.4
SYCP1-209ENST00000613524 PIK3CDO00329 1044 aa6.3□□□□□ -1.4
SYCP1-209ENST00000613524 C21orf2O43822 256 aa6.3□□□□□ -1.4
SYCP1-209ENST00000613524 C2CD5Q86YS7 1000 aa6.3□□□□□ -1.4
SYCP1-209ENST00000613524 DEPDC4Q8N2C3 294 aa6.3□□□□□ -1.4
SYCP1-209ENST00000613524 MRRFQ96E11 262 aaKnown RBP6.3□□□□□ -1.4
SYCP1-209ENST00000613524 BCL2L12Q9HB09 334 aa6.3□□□□□ -1.4
SYCP1-209ENST00000613524 TRMT112Q9UI30 125 aaKnown RBP6.3□□□□□ -1.4
SYCP1-209ENST00000613524 CARMIL3Q8ND23 1372 aa6.3□□□□□ -1.4
SYCP1-209ENST00000613524 PI4KAP2A4QPH2 592 aa6.29□□□□□ -1.4
SYCP1-209ENST00000613524 SMARCA5O60264 1052 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 182.1 ms