RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 ASXL1Q8IXJ9 1541 aa18■□□□□ 0.47
TNXB-208ENST00000611016 POLKQ9UBT6 870 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 STX6O43752 255 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 IL15P40933 162 aaPredicted RBP17.99■□□□□ 0.47
TNXB-208ENST00000611016 UBA7P41226 1012 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 PPP4R3BQ5MIZ7 849 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 GRM1Q13255 1194 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 IFIT1BQ5T764 474 aaKnown RBP17.99■□□□□ 0.47
TNXB-208ENST00000611016 TAF3Q5VWG9 929 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 CPLX3Q8WVH0 158 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 ITSN2Q9NZM3 1697 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 TRAPPC8Q9Y2L5 1435 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 KLF18A0A0U1RQI7 1052 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 USO1O60763 962 aaKnown RBP17.99■□□□□ 0.47
TNXB-208ENST00000611016 CCDC178Q5BJE1 867 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 MPHOSPH6Q99547 160 aaKnown RBP17.99■□□□□ 0.47
TNXB-208ENST00000611016 NUP88Q99567 741 aaPredicted RBP17.99■□□□□ 0.47
TNXB-208ENST00000611016 BIN1O00499 593 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 PRKCSHP14314 528 aaPredicted RBP17.99■□□□□ 0.47
TNXB-208ENST00000611016 PTPN14Q15678 1187 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 CRACR2AQ9BSW2 395 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 GDPD2Q9HCC8 539 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 FLT4P35916 1363 aa17.99■□□□□ 0.47
TNXB-208ENST00000611016 MTIF2P46199 727 aaKnown RBP17.98■□□□□ 0.47
TNXB-208ENST00000611016 TCERG1LQ5VWI1 586 aa17.98■□□□□ 0.47
TNXB-208ENST00000611016 TMCO3Q6UWJ1 677 aa17.98■□□□□ 0.47
TNXB-208ENST00000611016 FAM114A1Q8IWE2 563 aa17.98■□□□□ 0.47
TNXB-208ENST00000611016 GCP02774 474 aa17.98■□□□□ 0.47
TNXB-208ENST00000611016 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.98■□□□□ 0.47
TNXB-208ENST00000611016 SPDYE4A6NLX3 237 aa17.98■□□□□ 0.47
TNXB-208ENST00000611016 SYCP3Q8IZU3 236 aa17.98■□□□□ 0.47
TNXB-208ENST00000611016 TDRD12Q587J7 1177 aaKnown RBP17.98■□□□□ 0.47
TNXB-208ENST00000611016 SLC9C2Q5TAH2 1124 aa17.98■□□□□ 0.47
TNXB-208ENST00000611016 STXBP4Q6ZWJ1 553 aa17.98■□□□□ 0.47
TNXB-208ENST00000611016 KIF18AQ8NI77 898 aa17.98■□□□□ 0.47
TNXB-208ENST00000611016 CCDC40Q4G0X9 1142 aa17.98■□□□□ 0.47
TNXB-208ENST00000611016 MRPL50Q8N5N7 158 aaKnown RBP17.98■□□□□ 0.47
TNXB-208ENST00000611016 ESR2Q92731 530 aa17.98■□□□□ 0.47
TNXB-208ENST00000611016 BRF1Q92994 677 aa17.98■□□□□ 0.47
TNXB-208ENST00000611016 TBC1D2Q9BYX2 928 aa17.98■□□□□ 0.47
TNXB-208ENST00000611016 LMTK3Q96Q04 1460 aa17.98■□□□□ 0.47
TNXB-208ENST00000611016 YEATS4O95619 227 aa17.97■□□□□ 0.47
TNXB-208ENST00000611016 CETN1Q12798 172 aa17.97■□□□□ 0.47
TNXB-208ENST00000611016 LRRC2Q9BYS8 371 aa17.97■□□□□ 0.47
TNXB-208ENST00000611016 POLD1P28340 1107 aa17.97■□□□□ 0.47
TNXB-208ENST00000611016 PA2G4Q9UQ80 394 aaKnown RBP17.97■□□□□ 0.47
TNXB-208ENST00000611016 KCNA6P17658 529 aa17.96■□□□□ 0.47
TNXB-208ENST00000611016 ZC3H12CQ9C0D7 883 aaKnown RBP17.96■□□□□ 0.47
TNXB-208ENST00000611016 VEZTQ9HBM0 779 aa17.96■□□□□ 0.47
TNXB-208ENST00000611016 ZBTB43O43298 467 aa17.96■□□□□ 0.47
TNXB-208ENST00000611016 ATP8B2P98198 1209 aa17.96■□□□□ 0.47
TNXB-208ENST00000611016 NUCB1Q02818 461 aa17.96■□□□□ 0.47
TNXB-208ENST00000611016 TRAF1Q13077 416 aa17.96■□□□□ 0.47
TNXB-208ENST00000611016 NSFL1CQ9UNZ2 370 aaKnown RBP17.96■□□□□ 0.47
TNXB-208ENST00000611016 IRS4O14654 1257 aaPredicted RBP17.96■□□□□ 0.47
TNXB-208ENST00000611016 SDSP20132 328 aa17.96■□□□□ 0.47
TNXB-208ENST00000611016 CASQ1P31415 396 aa17.96■□□□□ 0.47
TNXB-208ENST00000611016 DNA2P51530 1060 aa17.96■□□□□ 0.47
TNXB-208ENST00000611016 RBM26Q5T8P6 1007 aaKnown RBP17.96■□□□□ 0.47
TNXB-208ENST00000611016 ANAPC15P60006 121 aa17.96■□□□□ 0.47
TNXB-208ENST00000611016 UVSSAQ2YD98 709 aa17.96■□□□□ 0.47
TNXB-208ENST00000611016 MCMDC2Q4G0Z9 681 aa17.96■□□□□ 0.47
TNXB-208ENST00000611016 BTG4Q9NY30 223 aa17.96■□□□□ 0.47
TNXB-208ENST00000611016 NUP153P49790 1475 aaKnown RBP17.96■□□□□ 0.46
TNXB-208ENST00000611016 BMP15O95972 392 aa17.95■□□□□ 0.46
TNXB-208ENST00000611016 TNPO1Q92973 898 aaKnown RBP17.95■□□□□ 0.46
TNXB-208ENST00000611016 CCDC102AQ96A19 550 aa17.95■□□□□ 0.46
TNXB-208ENST00000611016 CNNM2Q9H8M5 875 aa17.95■□□□□ 0.46
TNXB-208ENST00000611016 RIMBP2O15034 1052 aa17.95■□□□□ 0.46
TNXB-208ENST00000611016 HELBQ8NG08 1087 aaPredicted RBP17.95■□□□□ 0.46
TNXB-208ENST00000611016 DCAF5Q96JK2 942 aa17.95■□□□□ 0.46
TNXB-208ENST00000611016 ABCC1P33527 1531 aa17.95■□□□□ 0.46
TNXB-208ENST00000611016 MAGEB6P1A0A0J9YX57 407 aa17.95■□□□□ 0.46
TNXB-208ENST00000611016 STX1AQ16623 288 aa17.95■□□□□ 0.46
TNXB-208ENST00000611016 NBPF14Q5TI25 921 aa17.95■□□□□ 0.46
TNXB-208ENST00000611016 CLIP2Q9UDT6 1046 aa17.95■□□□□ 0.46
TNXB-208ENST00000611016 ISM2Q6H9L7 571 aa17.95■□□□□ 0.46
TNXB-208ENST00000611016 UGGT2Q9NYU1 1516 aa17.95■□□□□ 0.46
TNXB-208ENST00000611016 ZMYM3Q14202 1370 aa17.95■□□□□ 0.46
TNXB-208ENST00000611016 HEATR3Q7Z4Q2 680 aa17.94■□□□□ 0.46
TNXB-208ENST00000611016 NECAB1Q8N987 351 aa17.94■□□□□ 0.46
TNXB-208ENST00000611016 NPATQ14207 1427 aa17.94■□□□□ 0.46
TNXB-208ENST00000611016 NBPF7P0C2Y1 421 aaPredicted RBP17.94■□□□□ 0.46
TNXB-208ENST00000611016 SHTN1A0MZ66 631 aa17.94■□□□□ 0.46
TNXB-208ENST00000611016 PDE1AP54750 535 aa17.94■□□□□ 0.46
TNXB-208ENST00000611016 CWF19L2Q2TBE0 894 aaKnown RBP17.94■□□□□ 0.46
TNXB-208ENST00000611016 TMTC2Q8N394 836 aa17.94■□□□□ 0.46
TNXB-208ENST00000611016 CTNNBL1Q8WYA6 563 aaPredicted RBP17.94■□□□□ 0.46
TNXB-208ENST00000611016 EYA1Q99502 592 aa17.94■□□□□ 0.46
TNXB-208ENST00000611016 MAP3K5Q99683 1374 aa17.94■□□□□ 0.46
TNXB-208ENST00000611016 NUP160Q12769 1436 aa17.94■□□□□ 0.46
TNXB-208ENST00000611016 BICD1Q96G01 975 aa17.94■□□□□ 0.46
TNXB-208ENST00000611016 TNNT1P13805 278 aa17.93■□□□□ 0.46
TNXB-208ENST00000611016 RTN1Q16799 776 aa17.93■□□□□ 0.46
TNXB-208ENST00000611016 FERMT2Q96AC1 680 aa17.93■□□□□ 0.46
TNXB-208ENST00000611016 PCDH11XQ9BZA7 1347 aa17.93■□□□□ 0.46
TNXB-208ENST00000611016 PCDH11YQ9BZA8 1340 aa17.93■□□□□ 0.46
TNXB-208ENST00000611016 MACROD2A1Z1Q3 448 aa17.93■□□□□ 0.46
TNXB-208ENST00000611016 PAFAH1B1P43034 410 aa17.93■□□□□ 0.46
TNXB-208ENST00000611016 ANKRD44Q8N8A2 993 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms