RNA–Protein interactions for RNA: ENST00000609318.5

LARP4B-210, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 1 (best)

Gene LARP4B, Length 4,848 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-210ENST00000609318 TSPY26PQ9H489 355 aa12.07□□□□□ -0.48
LARP4B-210ENST00000609318 HMG20BQ9P0W2 317 aa12.06□□□□□ -0.48
LARP4B-210ENST00000609318 NEURL4Q96JN8 1562 aa12.06□□□□□ -0.48
LARP4B-210ENST00000609318 CHMLP26374 656 aa12.06□□□□□ -0.48
LARP4B-210ENST00000609318 CDC5LQ99459 802 aaKnown RBP12.06□□□□□ -0.48
LARP4B-210ENST00000609318 CPSF1Q10570 1443 aaKnown RBP12.06□□□□□ -0.48
LARP4B-210ENST00000609318 CDKL5O76039 1030 aa12.06□□□□□ -0.48
LARP4B-210ENST00000609318 USP44Q9H0E7 712 aa12.06□□□□□ -0.48
LARP4B-210ENST00000609318 TTF1Q15361 905 aaPredicted RBP12.06□□□□□ -0.48
LARP4B-210ENST00000609318 KLHL34Q8N239 644 aa12.06□□□□□ -0.48
LARP4B-210ENST00000609318 DDX11Q96FC9 970 aa12.06□□□□□ -0.48
LARP4B-210ENST00000609318 DNAJC5Q9H3Z4 198 aa12.06□□□□□ -0.48
LARP4B-210ENST00000609318 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.06□□□□□ -0.48
LARP4B-210ENST00000609318 TAX1BP1Q86VP1 789 aa12.05□□□□□ -0.48
LARP4B-210ENST00000609318 TMX3Q96JJ7 454 aa12.05□□□□□ -0.48
LARP4B-210ENST00000609318 ADGRB1O14514 1584 aa12.05□□□□□ -0.48
LARP4B-210ENST00000609318 FRMPD1Q5SYB0 1578 aa12.05□□□□□ -0.48
LARP4B-210ENST00000609318 RBM25P49756 843 aaKnown RBP12.05□□□□□ -0.48
LARP4B-210ENST00000609318 UBAC1Q9BSL1 405 aa12.05□□□□□ -0.48
LARP4B-210ENST00000609318 USP26Q9BXU7 913 aa12.05□□□□□ -0.48
LARP4B-210ENST00000609318 ZNHIT6Q9NWK9 470 aaKnown RBP12.05□□□□□ -0.48
LARP4B-210ENST00000609318 HMGN5P82970 282 aaKnown RBP12.05□□□□□ -0.48
LARP4B-210ENST00000609318 ATP2B3Q16720 1220 aa12.05□□□□□ -0.48
LARP4B-210ENST00000609318 DZIP3Q86Y13 1208 aaKnown RBP12.05□□□□□ -0.48
LARP4B-210ENST00000609318 LARP6Q9BRS8 491 aaKnown RBP12.05□□□□□ -0.48
LARP4B-210ENST00000609318 CDCA7Q9BWT1 371 aaPredicted RBP12.05□□□□□ -0.48
LARP4B-210ENST00000609318 NAPBQ9H115 298 aa12.05□□□□□ -0.48
LARP4B-210ENST00000609318 CFAP45Q9UL16 551 aa12.05□□□□□ -0.48
LARP4B-210ENST00000609318 ZNF213O14771 459 aa12.04□□□□□ -0.48
LARP4B-210ENST00000609318 GRPEL1Q9HAV7 217 aa12.04□□□□□ -0.48
LARP4B-210ENST00000609318 MTMR7Q9Y216 660 aa12.04□□□□□ -0.48
LARP4B-210ENST00000609318 FERMT3Q86UX7 667 aa12.04□□□□□ -0.48
LARP4B-210ENST00000609318 SPATA32Q96LK8 384 aa12.04□□□□□ -0.48
LARP4B-210ENST00000609318 PREX1Q8TCU6 1659 aa12.04□□□□□ -0.48
LARP4B-210ENST00000609318 ERVV-2B6SEH9 535 aa12.04□□□□□ -0.48
LARP4B-210ENST00000609318 ATP2B1P20020 1258 aa12.04□□□□□ -0.48
LARP4B-210ENST00000609318 CCDC112Q8NEF3 446 aa12.04□□□□□ -0.48
LARP4B-210ENST00000609318 C8orf37Q96NL8 207 aa12.04□□□□□ -0.48
LARP4B-210ENST00000609318 RBM8AQ9Y5S9 174 aaKnown RBP12.04□□□□□ -0.48
LARP4B-210ENST00000609318 A1BGP04217 495 aa12.04□□□□□ -0.48
LARP4B-210ENST00000609318 CCDC152Q4G0S7 254 aa12.04□□□□□ -0.48
LARP4B-210ENST00000609318 JMYQ8N9B5 988 aa12.04□□□□□ -0.48
LARP4B-210ENST00000609318 UQCRFS1P1P0C7P4 283 aa12.03□□□□□ -0.48
LARP4B-210ENST00000609318 TXLNAP40222 546 aa12.03□□□□□ -0.48
LARP4B-210ENST00000609318 GCKRQ14397 625 aa12.03□□□□□ -0.48
LARP4B-210ENST00000609318 NUP133Q8WUM0 1156 aa12.03□□□□□ -0.48
LARP4B-210ENST00000609318 NEK1Q96PY6 1258 aa12.03□□□□□ -0.48
LARP4B-210ENST00000609318 ERBB3P21860 1342 aa12.03□□□□□ -0.48
LARP4B-210ENST00000609318 ZFYP08048 801 aaPredicted RBP12.03□□□□□ -0.48
LARP4B-210ENST00000609318 ME1P48163 572 aa12.03□□□□□ -0.48
LARP4B-210ENST00000609318 TFCP2Q12800 502 aa12.03□□□□□ -0.48
LARP4B-210ENST00000609318 CDK5RAP3Q96JB5 506 aa12.03□□□□□ -0.48
LARP4B-210ENST00000609318 TRIM5Q9C035 493 aa12.03□□□□□ -0.48
LARP4B-210ENST00000609318 MAGEC2Q9UBF1 373 aaPredicted RBP12.03□□□□□ -0.48
LARP4B-210ENST00000609318 AOX1Q06278 1338 aa12.03□□□□□ -0.48
LARP4B-210ENST00000609318 CCP110O43303 1012 aa12.03□□□□□ -0.48
LARP4B-210ENST00000609318 KRT18P05783 430 aaKnown RBP12.03□□□□□ -0.48
LARP4B-210ENST00000609318 SUCLG2Q96I99 432 aa12.03□□□□□ -0.48
LARP4B-210ENST00000609318 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.03□□□□□ -0.48
LARP4B-210ENST00000609318 ADGRL3Q9HAR2 1447 aa12.03□□□□□ -0.48
LARP4B-210ENST00000609318 MCMDC2Q4G0Z9 681 aa12.02□□□□□ -0.48
LARP4B-210ENST00000609318 SSH3Q8TE77 659 aa12.02□□□□□ -0.48
LARP4B-210ENST00000609318 BRPF3Q9ULD4 1205 aa12.02□□□□□ -0.48
LARP4B-210ENST00000609318 USP31Q70CQ4 1352 aa12.02□□□□□ -0.49
LARP4B-210ENST00000609318 BAG4O95429 457 aaKnown RBP12.02□□□□□ -0.49
LARP4B-210ENST00000609318 NMIQ13287 307 aaPredicted RBP12.02□□□□□ -0.49
LARP4B-210ENST00000609318 USP16Q9Y5T5 823 aa12.02□□□□□ -0.49
LARP4B-210ENST00000609318 ADAMTS13Q76LX8 1427 aa12.02□□□□□ -0.49
LARP4B-210ENST00000609318 NEBLO76041 1014 aa12.02□□□□□ -0.49
LARP4B-210ENST00000609318 BEND3Q5T5X7 828 aa12.02□□□□□ -0.49
LARP4B-210ENST00000609318 NIP7Q9Y221 180 aaKnown RBP eCLIP12.02□□□□□ -0.49
LARP4B-210ENST00000609318 IRS4O14654 1257 aaPredicted RBP12.01□□□□□ -0.49
LARP4B-210ENST00000609318 CCDC192P0DO97 292 aa12.01□□□□□ -0.49
LARP4B-210ENST00000609318 NF2P35240 595 aa12.01□□□□□ -0.49
LARP4B-210ENST00000609318 BCL11BQ9C0K0 894 aaPredicted RBP12.01□□□□□ -0.49
LARP4B-210ENST00000609318 TNMDQ9H2S6 317 aa12.01□□□□□ -0.49
LARP4B-210ENST00000609318 PTCH1Q13635 1447 aa12.01□□□□□ -0.49
LARP4B-210ENST00000609318 MINDY4BA8MYZ0 360 aa12.01□□□□□ -0.49
LARP4B-210ENST00000609318 UTP14AQ9BVJ6 771 aaKnown RBP12.01□□□□□ -0.49
LARP4B-210ENST00000609318 PAG1Q9NWQ8 432 aa12.01□□□□□ -0.49
LARP4B-210ENST00000609318 ANKIB1Q9P2G1 1089 aa12.01□□□□□ -0.49
LARP4B-210ENST00000609318 CDC42BPGQ6DT37 1551 aa12□□□□□ -0.49
LARP4B-210ENST00000609318 STX6O43752 255 aa12□□□□□ -0.49
LARP4B-210ENST00000609318 DESP17661 470 aa12□□□□□ -0.49
LARP4B-210ENST00000609318 GJB2P29033 226 aa12□□□□□ -0.49
LARP4B-210ENST00000609318 KLHDC4Q8TBB5 520 aa12□□□□□ -0.49
LARP4B-210ENST00000609318 SCAND2PQ9GZW5 306 aaPredicted RBP12□□□□□ -0.49
LARP4B-210ENST00000609318 NEURL1BA8MQ27 555 aa12□□□□□ -0.49
LARP4B-210ENST00000609318 DNAJC10Q8IXB1 793 aa12□□□□□ -0.49
LARP4B-210ENST00000609318 TXLNBQ8N3L3 684 aa12□□□□□ -0.49
LARP4B-210ENST00000609318 FAM89AQ96GI7 184 aa12□□□□□ -0.49
LARP4B-210ENST00000609318 KDRP35968 1356 aa12□□□□□ -0.49
LARP4B-210ENST00000609318 CCDC181Q5TID7 509 aa12□□□□□ -0.49
LARP4B-210ENST00000609318 NBPF5PQ86XG9 351 aaPredicted RBP12□□□□□ -0.49
LARP4B-210ENST00000609318 WASF1Q92558 559 aa12□□□□□ -0.49
LARP4B-210ENST00000609318 CCDC39Q9UFE4 941 aa12□□□□□ -0.49
LARP4B-210ENST00000609318 EYA2O00167 538 aa11.99□□□□□ -0.49
LARP4B-210ENST00000609318 RFC4P35249 363 aa11.99□□□□□ -0.49
LARP4B-210ENST00000609318 RAD50Q92878 1312 aa11.99□□□□□ -0.49
LARP4B-210ENST00000609318 MROH2AA6NES4 1674 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms