RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	LBX1	P52954	281 aa		27.52	■■■□□ 2
NECAB3-222	ENST00000607805	DPP8	Q6V1X1	898 aa	Predicted RBP	27.52	■■■□□ 2
NECAB3-222	ENST00000607805	MPND	Q8N594	471 aa		27.52	■■■□□ 2
NECAB3-222	ENST00000607805	TRMT112	Q9UI30	125 aa	Known RBP	27.52	■■■□□ 2
NECAB3-222	ENST00000607805	COL4A1	P02462	1669 aa		27.52	■■■□□ 2
NECAB3-222	ENST00000607805	TRAF5	O00463	557 aa		27.51	■■□□□ 1.99
NECAB3-222	ENST00000607805	MAP2K1	Q02750	393 aa	Predicted RBP	27.51	■■□□□ 1.99
NECAB3-222	ENST00000607805	GRAP	Q13588	217 aa		27.51	■■□□□ 1.99
NECAB3-222	ENST00000607805	GRAPL	Q8TC17	118 aa	Predicted RBP	27.51	■■□□□ 1.99
NECAB3-222	ENST00000607805	PGAP2	Q9UHJ9	254 aa		27.51	■■□□□ 1.99
NECAB3-222	ENST00000607805	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.5	■■□□□ 1.99
NECAB3-222	ENST00000607805	CDHR2	Q9BYE9	1310 aa		27.5	■■□□□ 1.99
NECAB3-222	ENST00000607805	DDX46	Q7L014	1031 aa	Known RBP	27.5	■■□□□ 1.99
NECAB3-222	ENST00000607805	CCDC146	Q8IYE0	955 aa		27.5	■■□□□ 1.99
NECAB3-222	ENST00000607805	CHPF2	Q9P2E5	772 aa		27.5	■■□□□ 1.99
NECAB3-222	ENST00000607805	GMPS	P49915	693 aa	Predicted RBP	27.49	■■□□□ 1.99
NECAB3-222	ENST00000607805	TLL2	Q9Y6L7	1015 aa		27.49	■■□□□ 1.99
NECAB3-222	ENST00000607805	HOXB7	P09629	217 aa		27.48	■■□□□ 1.99
NECAB3-222	ENST00000607805	NEUROD2	Q15784	382 aa		27.48	■■□□□ 1.99
NECAB3-222	ENST00000607805	CIAPIN1	Q6FI81	312 aa		27.48	■■□□□ 1.99
NECAB3-222	ENST00000607805	CAPNS2	Q96L46	248 aa		27.48	■■□□□ 1.99
NECAB3-222	ENST00000607805	ISCA1	Q9BUE6	129 aa		27.48	■■□□□ 1.99
NECAB3-222	ENST00000607805	TMC4	Q7Z404	712 aa		27.47	■■□□□ 1.99
NECAB3-222	ENST00000607805	PLBD2	Q8NHP8	589 aa		27.47	■■□□□ 1.99
NECAB3-222	ENST00000607805	RUNDC1	Q96C34	613 aa		27.47	■■□□□ 1.99
NECAB3-222	ENST00000607805	SCN9A	Q15858	1988 aa		27.46	■■□□□ 1.99
NECAB3-222	ENST00000607805	YDJC	A8MPS7	323 aa		27.46	■■□□□ 1.99
NECAB3-222	ENST00000607805	HIRA	P54198	1017 aa	Predicted RBP	27.45	■■□□□ 1.98
NECAB3-222	ENST00000607805	CYP4F22	Q6NT55	531 aa		27.45	■■□□□ 1.98
NECAB3-222	ENST00000607805	CASP8AP2	Q9UKL3	1982 aa		27.44	■■□□□ 1.98
NECAB3-222	ENST00000607805	RAD17	O75943	681 aa		27.44	■■□□□ 1.98
NECAB3-222	ENST00000607805	ECE1	P42892	770 aa		27.44	■■□□□ 1.98
NECAB3-222	ENST00000607805	TNIP1	Q15025	636 aa		27.44	■■□□□ 1.98
NECAB3-222	ENST00000607805	SF3B3	Q15393	1217 aa	Known RBP	27.44	■■□□□ 1.98
NECAB3-222	ENST00000607805	HDGFL1	Q5TGJ6	251 aa		27.44	■■□□□ 1.98
NECAB3-222	ENST00000607805	ANKRD13D	Q6ZTN6	518 aa		27.44	■■□□□ 1.98
NECAB3-222	ENST00000607805	ZC3H15	Q8WU90	426 aa	Known RBP	27.44	■■□□□ 1.98
NECAB3-222	ENST00000607805	SAPCD2	Q86UD0	394 aa		27.43	■■□□□ 1.98
NECAB3-222	ENST00000607805	GPR101	Q96P66	508 aa	Predicted RBP	27.43	■■□□□ 1.98
NECAB3-222	ENST00000607805	PSME4	Q14997	1843 aa		27.42	■■□□□ 1.98
NECAB3-222	ENST00000607805	GLIS2	Q9BZE0	524 aa	Predicted RBP	27.42	■■□□□ 1.98
NECAB3-222	ENST00000607805	DBF4	Q9UBU7	674 aa	Predicted RBP	27.42	■■□□□ 1.98
NECAB3-222	ENST00000607805	ADAMTS8	Q9UP79	889 aa		27.42	■■□□□ 1.98
NECAB3-222	ENST00000607805	LAS1L	Q9Y4W2	734 aa	Known RBP	27.42	■■□□□ 1.98
NECAB3-222	ENST00000607805	DDX10	Q13206	875 aa	Known RBP	27.41	■■□□□ 1.98
NECAB3-222	ENST00000607805	TRIM28	Q13263	835 aa	Known RBP	27.41	■■□□□ 1.98
NECAB3-222	ENST00000607805	TRPM4	Q8TD43	1214 aa		27.41	■■□□□ 1.98
NECAB3-222	ENST00000607805	CELF1	Q92879	486 aa	Known RBP	27.41	■■□□□ 1.98
NECAB3-222	ENST00000607805	ZNF428	Q96B54	188 aa		27.41	■■□□□ 1.98
NECAB3-222	ENST00000607805	FAM89A	Q96GI7	184 aa		27.41	■■□□□ 1.98
NECAB3-222	ENST00000607805	CFAP44	Q96MT7	982 aa		27.41	■■□□□ 1.98
NECAB3-222	ENST00000607805	SHTN1	A0MZ66	631 aa		27.4	■■□□□ 1.98
NECAB3-222	ENST00000607805	HHIPL1	Q96JK4	782 aa		27.4	■■□□□ 1.98
NECAB3-222	ENST00000607805	BCL2L13	Q9BXK5	485 aa		27.4	■■□□□ 1.98
NECAB3-222	ENST00000607805	CNOT7	Q9UIV1	285 aa	Known RBP	27.4	■■□□□ 1.98
NECAB3-222	ENST00000607805	ATP5J2-PTCD1	G3V325	749 aa		27.39	■■□□□ 1.98
NECAB3-222	ENST00000607805	CELF2	O95319	508 aa	Known RBP	27.39	■■□□□ 1.98
NECAB3-222	ENST00000607805	MAP2K2	P36507	400 aa		27.39	■■□□□ 1.98
NECAB3-222	ENST00000607805	ZNF853	P0CG23	659 aa		27.38	■■□□□ 1.97
NECAB3-222	ENST00000607805	DUSP27	Q5VZP5	1158 aa		27.38	■■□□□ 1.97
NECAB3-222	ENST00000607805	DPF2	Q92785	391 aa		27.38	■■□□□ 1.97
NECAB3-222	ENST00000607805	HYPK	Q9NX55	129 aa		27.38	■■□□□ 1.97
NECAB3-222	ENST00000607805	AOC2	O75106	756 aa		27.37	■■□□□ 1.97
NECAB3-222	ENST00000607805	WDR43	Q15061	677 aa	Known RBP eCLIP	27.37	■■□□□ 1.97
NECAB3-222	ENST00000607805	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	27.37	■■□□□ 1.97
NECAB3-222	ENST00000607805	POLL	Q9UGP5	575 aa		27.37	■■□□□ 1.97
NECAB3-222	ENST00000607805	WASHC4	Q2M389	1173 aa		27.36	■■□□□ 1.97
NECAB3-222	ENST00000607805	MBIP	Q9NS73	344 aa		27.36	■■□□□ 1.97
NECAB3-222	ENST00000607805	PSMD14	O00487	310 aa		27.35	■■□□□ 1.97
NECAB3-222	ENST00000607805	CDC37L1	Q7L3B6	337 aa		27.35	■■□□□ 1.97
NECAB3-222	ENST00000607805	MICALL2	Q8IY33	904 aa		27.35	■■□□□ 1.97
NECAB3-222	ENST00000607805	ABHD8	Q96I13	439 aa		27.35	■■□□□ 1.97
NECAB3-222	ENST00000607805	NSFL1C	Q9UNZ2	370 aa	Known RBP	27.35	■■□□□ 1.97
NECAB3-222	ENST00000607805	MYH3	P11055	1940 aa		27.35	■■□□□ 1.97
NECAB3-222	ENST00000607805	GPSM2	P81274	684 aa		27.34	■■□□□ 1.97
NECAB3-222	ENST00000607805	GRM1	Q13255	1194 aa		27.34	■■□□□ 1.97
NECAB3-222	ENST00000607805	ZBTB12	Q9Y330	459 aa	Predicted RBP	27.34	■■□□□ 1.97
NECAB3-222	ENST00000607805		H7C1D1	291 aa		27.33	■■□□□ 1.97
NECAB3-222	ENST00000607805	IRS4	O14654	1257 aa	Predicted RBP	27.33	■■□□□ 1.97
NECAB3-222	ENST00000607805	DBNDD1	Q9H9R9	158 aa		27.33	■■□□□ 1.97
NECAB3-222	ENST00000607805	RTL9	Q8NET4	1388 aa		27.33	■■□□□ 1.97
NECAB3-222	ENST00000607805	BEGAIN	Q9BUH8	593 aa		27.32	■■□□□ 1.96
NECAB3-222	ENST00000607805	KCNQ5	Q9NR82	932 aa		27.32	■■□□□ 1.96
NECAB3-222	ENST00000607805	RPS8	P62241	208 aa	Known RBP	27.31	■■□□□ 1.96
NECAB3-222	ENST00000607805	RTL5	Q5HYW3	569 aa	Predicted RBP	27.31	■■□□□ 1.96
NECAB3-222	ENST00000607805	SAMD7	Q7Z3H4	446 aa		27.31	■■□□□ 1.96
NECAB3-222	ENST00000607805	AKAP11	Q9UKA4	1901 aa		27.3	■■□□□ 1.96
NECAB3-222	ENST00000607805	RIMBP2	O15034	1052 aa		27.3	■■□□□ 1.96
NECAB3-222	ENST00000607805	EGFR	P00533	1210 aa		27.3	■■□□□ 1.96
NECAB3-222	ENST00000607805	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.3	■■□□□ 1.96
NECAB3-222	ENST00000607805	TBC1D16	Q8TBP0	767 aa		27.3	■■□□□ 1.96
NECAB3-222	ENST00000607805	PHAX	Q9H814	394 aa	Known RBP	27.3	■■□□□ 1.96
NECAB3-222	ENST00000607805	PODXL2	Q9NZ53	605 aa		27.3	■■□□□ 1.96
NECAB3-222	ENST00000607805	C6orf229	H3BNL8	230 aa		27.29	■■□□□ 1.96
NECAB3-222	ENST00000607805	ECE2	O60344	883 aa		27.29	■■□□□ 1.96
NECAB3-222	ENST00000607805	RPS12	P25398	132 aa	Known RBP	27.29	■■□□□ 1.96
NECAB3-222	ENST00000607805	BRPF1	P55201	1214 aa	Predicted RBP	27.29	■■□□□ 1.96
NECAB3-222	ENST00000607805	DLK2	Q6UY11	383 aa		27.29	■■□□□ 1.96
NECAB3-222	ENST00000607805	USP48	Q86UV5	1035 aa		27.29	■■□□□ 1.96
NECAB3-222	ENST00000607805	PRKRIP1	Q9H875	184 aa	Predicted RBP	27.28	■■□□□ 1.96

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