RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 GOLPH3LQ9H4A5 285 aa14.57□□□□□ -0.08
CDCA3-212ENST00000604599 ZCCHC17Q9NP64 241 aaKnown RBP14.57□□□□□ -0.08
CDCA3-212ENST00000604599 ADGRL3Q9HAR2 1447 aa14.57□□□□□ -0.08
CDCA3-212ENST00000604599 CHD2O14647 1828 aaKnown RBP14.57□□□□□ -0.08
CDCA3-212ENST00000604599 RAPGEF3O95398 923 aa14.56□□□□□ -0.08
CDCA3-212ENST00000604599 GSDMDP57764 484 aa14.56□□□□□ -0.08
CDCA3-212ENST00000604599 RESTQ13127 1097 aa14.56□□□□□ -0.08
CDCA3-212ENST00000604599 FBXO31Q5XUX0 539 aaPredicted RBP14.56□□□□□ -0.08
CDCA3-212ENST00000604599 UBXN4Q92575 508 aa14.56□□□□□ -0.08
CDCA3-212ENST00000604599 SMARCE1Q969G3 411 aa14.56□□□□□ -0.08
CDCA3-212ENST00000604599 CRYBG1Q9Y4K1 1723 aa14.56□□□□□ -0.08
CDCA3-212ENST00000604599 TTC41PQ6P2S7 1318 aa14.56□□□□□ -0.08
CDCA3-212ENST00000604599 ZRANB2O95218 330 aaKnown RBP eCLIP14.56□□□□□ -0.08
CDCA3-212ENST00000604599 ARGLU1Q9NWB6 273 aaPredicted RBP14.56□□□□□ -0.08
CDCA3-212ENST00000604599 TNNT3P45378 269 aaPredicted RBP14.55□□□□□ -0.08
CDCA3-212ENST00000604599 TPM4P67936 248 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 NMIQ13287 307 aaPredicted RBP14.55□□□□□ -0.08
CDCA3-212ENST00000604599 TMC6Q7Z403 805 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 CLASRPQ8N2M8 674 aaKnown RBP14.55□□□□□ -0.08
CDCA3-212ENST00000604599 NFATC2IPQ8NCF5 419 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 ECHDC1Q9NTX5 307 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 DNAI1Q9UI46 699 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 CCDC61Q9Y6R9 512 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 SMC2O95347 1197 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 ARMCX5Q6P1M9 558 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 CEP57L1Q8IYX8 460 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 MAP4K1Q92918 833 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 KCND1Q9NSA2 647 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 ANO10Q9NW15 660 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 ORC3Q9UBD5 711 aaPredicted RBP14.55□□□□□ -0.08
CDCA3-212ENST00000604599 RPS6KB1P23443 525 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 ANKRD1Q15327 319 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 ZBTB9Q96C00 473 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 EPC1Q9H2F5 836 aa14.55□□□□□ -0.08
CDCA3-212ENST00000604599 MON2Q7Z3U7 1717 aa14.54□□□□□ -0.08
CDCA3-212ENST00000604599 KINO60870 393 aaKnown RBP14.54□□□□□ -0.08
CDCA3-212ENST00000604599 SFPQP23246 707 aaKnown RBP eCLIP14.54□□□□□ -0.08
CDCA3-212ENST00000604599 CCDC73Q6ZRK6 1079 aa14.54□□□□□ -0.08
CDCA3-212ENST00000604599 TXNDC2Q86VQ3 553 aa14.54□□□□□ -0.08
CDCA3-212ENST00000604599 TXLNBQ8N3L3 684 aa14.54□□□□□ -0.08
CDCA3-212ENST00000604599 MNS1Q8NEH6 495 aa14.54□□□□□ -0.08
CDCA3-212ENST00000604599 ZFP91Q96JP5 570 aaPredicted RBP14.54□□□□□ -0.08
CDCA3-212ENST00000604599 CCDC34Q96HJ3 373 aa14.54□□□□□ -0.08
CDCA3-212ENST00000604599 XPO4Q9C0E2 1151 aaKnown RBP14.54□□□□□ -0.08
CDCA3-212ENST00000604599 OSBPL5Q9H0X9 879 aaPredicted RBP14.54□□□□□ -0.08
CDCA3-212ENST00000604599 RSPH14Q9UHP6 348 aa14.54□□□□□ -0.08
CDCA3-212ENST00000604599 CFAP45Q9UL16 551 aa14.54□□□□□ -0.08
CDCA3-212ENST00000604599 C3P01024 1663 aa14.54□□□□□ -0.08
CDCA3-212ENST00000604599 USP42Q9H9J4 1324 aaKnown RBP14.53□□□□□ -0.08
CDCA3-212ENST00000604599 A0A0D9SFI3 127 aa14.53□□□□□ -0.08
CDCA3-212ENST00000604599 CTAGE5O15320 804 aa14.53□□□□□ -0.08
CDCA3-212ENST00000604599 OAS2P29728 719 aaKnown RBP14.53□□□□□ -0.08
CDCA3-212ENST00000604599 HDGFL1Q5TGJ6 251 aa14.53□□□□□ -0.08
CDCA3-212ENST00000604599 TRIM66O15016 1216 aa14.53□□□□□ -0.08
CDCA3-212ENST00000604599 C10orf67Q8IYJ2 551 aa14.53□□□□□ -0.08
CDCA3-212ENST00000604599 EVI5LQ96CN4 794 aa14.53□□□□□ -0.08
CDCA3-212ENST00000604599 IFNKQ9P0W0 207 aa14.53□□□□□ -0.08
CDCA3-212ENST00000604599 PA2G4Q9UQ80 394 aaKnown RBP14.53□□□□□ -0.08
CDCA3-212ENST00000604599 GIGYF1O75420 1035 aaPredicted RBP14.52□□□□□ -0.08
CDCA3-212ENST00000604599 SASH3O75995 380 aa14.52□□□□□ -0.08
CDCA3-212ENST00000604599 URI1O94763 535 aaPredicted RBP14.52□□□□□ -0.08
CDCA3-212ENST00000604599 HSP90B1P14625 803 aaKnown RBP14.52□□□□□ -0.08
CDCA3-212ENST00000604599 HSP90AB4PQ58FF6 505 aa14.52□□□□□ -0.08
CDCA3-212ENST00000604599 FMNL2Q96PY5 1086 aa14.52□□□□□ -0.08
CDCA3-212ENST00000604599 PEAK1Q9H792 1746 aa14.52□□□□□ -0.08
CDCA3-212ENST00000604599 LCMT1Q9UIC8 334 aa14.52□□□□□ -0.08
CDCA3-212ENST00000604599 NUTM2FA1L443 756 aa14.52□□□□□ -0.09
CDCA3-212ENST00000604599 GYS2P54840 703 aa14.52□□□□□ -0.09
CDCA3-212ENST00000604599 CCDC191Q8NCU4 936 aa14.52□□□□□ -0.09
CDCA3-212ENST00000604599 CARD6Q9BX69 1037 aa14.52□□□□□ -0.09
CDCA3-212ENST00000604599 RASSF4Q9H2L5 321 aa14.52□□□□□ -0.09
CDCA3-212ENST00000604599 TMX1Q9H3N1 280 aa14.52□□□□□ -0.09
CDCA3-212ENST00000604599 PXDNLA1KZ92 1463 aa14.52□□□□□ -0.09
CDCA3-212ENST00000604599 PSDA5PKW4 1024 aaPredicted RBP14.52□□□□□ -0.09
CDCA3-212ENST00000604599 PPFIA3O75145 1194 aa14.52□□□□□ -0.09
CDCA3-212ENST00000604599 EIF2S2P20042 333 aaKnown RBP14.52□□□□□ -0.09
CDCA3-212ENST00000604599 ETF1P62495 437 aaKnown RBP14.52□□□□□ -0.09
CDCA3-212ENST00000604599 ZSCAN26Q16670 478 aa14.52□□□□□ -0.09
CDCA3-212ENST00000604599 AACSQ86V21 672 aa14.52□□□□□ -0.09
CDCA3-212ENST00000604599 CCDC150Q8NCX0 1101 aa14.52□□□□□ -0.09
CDCA3-212ENST00000604599 GPATCH3Q96I76 525 aa14.52□□□□□ -0.09
CDCA3-212ENST00000604599 NPHP4O75161 1426 aaPredicted RBP14.51□□□□□ -0.09
CDCA3-212ENST00000604599 ITSN1Q15811 1721 aa14.51□□□□□ -0.09
CDCA3-212ENST00000604599 TAF7Q15545 349 aaPredicted RBP14.51□□□□□ -0.09
CDCA3-212ENST00000604599 MUM1L1Q5H9M0 696 aa14.51□□□□□ -0.09
CDCA3-212ENST00000604599 FSIP1Q8NA03 581 aa14.51□□□□□ -0.09
CDCA3-212ENST00000604599 CACNA1FO60840 1977 aa14.51□□□□□ -0.09
CDCA3-212ENST00000604599 RGPD1P0DJD0 1748 aa14.51□□□□□ -0.09
CDCA3-212ENST00000604599 IRX3P78415 501 aaPredicted RBP14.51□□□□□ -0.09
CDCA3-212ENST00000604599 USP28Q96RU2 1077 aa14.51□□□□□ -0.09
CDCA3-212ENST00000604599 NAT10Q9H0A0 1025 aaKnown RBP14.51□□□□□ -0.09
CDCA3-212ENST00000604599 IMPACTQ9P2X3 320 aa14.51□□□□□ -0.09
CDCA3-212ENST00000604599 N4BP2Q86UW6 1770 aaPredicted RBP14.51□□□□□ -0.09
CDCA3-212ENST00000604599 FANCGO15287 622 aa14.5□□□□□ -0.09
CDCA3-212ENST00000604599 TADA3O75528 432 aa14.5□□□□□ -0.09
CDCA3-212ENST00000604599 ME1P48163 572 aa14.5□□□□□ -0.09
CDCA3-212ENST00000604599 DPCR1Q3MIW9 517 aa14.5□□□□□ -0.09
CDCA3-212ENST00000604599 ZSCAN16Q9H4T2 348 aaPredicted RBP14.5□□□□□ -0.09
CDCA3-212ENST00000604599 RIMBP3CA6NJZ7 1639 aa14.5□□□□□ -0.09
CDCA3-212ENST00000604599 RIMBP3BA6NNM3 1639 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms