RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 COL26A1Q96A83 441 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 TLR7Q9NYK1 1049 aaKnown RBP3.35□□□□□ -1.87
CEP290-208ENST00000604024 C21orf2O43822 256 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 FSTP19883 344 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 SOX18P35713 384 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 CLDN10P78369 228 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 GRIK4Q16099 956 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 MCTP1Q6DN14 999 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 C8orf86Q6ZUL3 223 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 DZIP1LQ8IYY4 767 aaKnown RBP3.35□□□□□ -1.87
CEP290-208ENST00000604024 FAM229AH3BQW9 127 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 NOS3P29474 1203 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 UVSSAQ2YD98 709 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 ELMSAN1Q6PJG2 1045 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 DMRTC2Q8IXT2 367 aaPredicted RBP3.35□□□□□ -1.87
CEP290-208ENST00000604024 ZNF280CQ8ND82 737 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 HSH2DQ96JZ2 352 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 LPIN3Q9BQK8 851 aa3.35□□□□□ -1.87
CEP290-208ENST00000604024 FAM196BA6NMK8 535 aa3.34□□□□□ -1.87
CEP290-208ENST00000604024 KIAA1324LA8MWY0 1029 aaPredicted RBP3.34□□□□□ -1.87
CEP290-208ENST00000604024 EIF4EBP3O60516 100 aaPredicted RBP3.34□□□□□ -1.87
CEP290-208ENST00000604024 HDGFL1Q5TGJ6 251 aa3.34□□□□□ -1.88
CEP290-208ENST00000604024 DHX32Q7L7V1 743 aaKnown RBP3.34□□□□□ -1.88
CEP290-208ENST00000604024 SCG3Q8WXD2 468 aaKnown RBP3.34□□□□□ -1.88
CEP290-208ENST00000604024 RBSNQ9H1K0 784 aa3.34□□□□□ -1.88
CEP290-208ENST00000604024 AKTIPQ9H8T0 292 aa3.34□□□□□ -1.88
CEP290-208ENST00000604024 KIAA1024Q9UPX6 916 aa3.34□□□□□ -1.88
CEP290-208ENST00000604024 F8W735 103 aaPredicted RBP3.33□□□□□ -1.88
CEP290-208ENST00000604024 MICAL2O94851 1124 aa3.33□□□□□ -1.88
CEP290-208ENST00000604024 NFKB1P19838 968 aa3.33□□□□□ -1.88
CEP290-208ENST00000604024 PLAURQ03405 335 aa3.33□□□□□ -1.88
CEP290-208ENST00000604024 SH3PXD2AQ5TCZ1 1133 aa3.33□□□□□ -1.88
CEP290-208ENST00000604024 USP21Q9UK80 565 aa3.33□□□□□ -1.88
CEP290-208ENST00000604024 RAXQ9Y2V3 346 aa3.33□□□□□ -1.88
CEP290-208ENST00000604024 UBTFP17480 764 aaKnown RBP3.33□□□□□ -1.88
CEP290-208ENST00000604024 IDH3AP50213 366 aa3.33□□□□□ -1.88
CEP290-208ENST00000604024 WNT8BQ93098 351 aa3.33□□□□□ -1.88
CEP290-208ENST00000604024 IFT43Q96FT9 208 aa3.33□□□□□ -1.88
CEP290-208ENST00000604024 CEP41Q9BYV8 373 aa3.33□□□□□ -1.88
CEP290-208ENST00000604024 A6NJR5 290 aa3.32□□□□□ -1.88
CEP290-208ENST00000604024 PTCD1O75127 700 aaKnown RBP3.32□□□□□ -1.88
CEP290-208ENST00000604024 IGLV1-40P01703 118 aa3.32□□□□□ -1.88
CEP290-208ENST00000604024 WEE1P30291 646 aa3.32□□□□□ -1.88
CEP290-208ENST00000604024 TBCELQ5QJ74 424 aa3.32□□□□□ -1.88
CEP290-208ENST00000604024 PERM1Q5SV97 790 aa3.32□□□□□ -1.88
CEP290-208ENST00000604024 FAM35AQ86V20 835 aa3.32□□□□□ -1.88
CEP290-208ENST00000604024 ANKMY2Q8IV38 441 aa3.32□□□□□ -1.88
CEP290-208ENST00000604024 RASA1P20936 1047 aa3.32□□□□□ -1.88
CEP290-208ENST00000604024 IREB2P48200 963 aaKnown RBP3.32□□□□□ -1.88
CEP290-208ENST00000604024 VTI1AQ96AJ9 217 aa3.32□□□□□ -1.88
CEP290-208ENST00000604024 UCN2Q96RP3 112 aa3.32□□□□□ -1.88
CEP290-208ENST00000604024 VRTNQ9H8Y1 702 aa3.32□□□□□ -1.88
CEP290-208ENST00000604024 LOC102724428A0A0B4J2F2 783 aa3.31□□□□□ -1.88
CEP290-208ENST00000604024 ZBTB42B2RXF5 422 aa3.31□□□□□ -1.88
CEP290-208ENST00000604024 PSAPP07602 524 aa3.31□□□□□ -1.88
CEP290-208ENST00000604024 SIK1P57059 783 aa3.31□□□□□ -1.88
CEP290-208ENST00000604024 PTK7Q13308 1070 aa3.31□□□□□ -1.88
CEP290-208ENST00000604024 CPSF6Q16630 551 aaKnown RBP eCLIP3.31□□□□□ -1.88
CEP290-208ENST00000604024 MAFBQ9Y5Q3 323 aaPredicted RBP3.31□□□□□ -1.88
CEP290-208ENST00000604024 RPLP1P05386 114 aaKnown RBP3.31□□□□□ -1.88
CEP290-208ENST00000604024 GRIK1P39086 918 aa3.31□□□□□ -1.88
CEP290-208ENST00000604024 ELOAQ14241 798 aaKnown RBP3.31□□□□□ -1.88
CEP290-208ENST00000604024 TSEN2Q8NCE0 465 aaKnown RBP3.31□□□□□ -1.88
CEP290-208ENST00000604024 ADAMTS19Q8TE59 1207 aa3.31□□□□□ -1.88
CEP290-208ENST00000604024 MEGF10Q96KG7 1140 aa3.31□□□□□ -1.88
CEP290-208ENST00000604024 BCS1LQ9Y276 419 aa3.31□□□□□ -1.88
CEP290-208ENST00000604024 HIF3AQ9Y2N7 669 aa3.31□□□□□ -1.88
CEP290-208ENST00000604024 GHRHP01286 108 aa3.3□□□□□ -1.88
CEP290-208ENST00000604024 RARAP10276 462 aa3.3□□□□□ -1.88
CEP290-208ENST00000604024 KANK4Q5T7N3 995 aaPredicted RBP3.3□□□□□ -1.88
CEP290-208ENST00000604024 NLRP13Q86W25 1043 aa3.3□□□□□ -1.88
CEP290-208ENST00000604024 DEPDC4Q8N2C3 294 aa3.3□□□□□ -1.88
CEP290-208ENST00000604024 NUDT8Q8WV74 236 aa3.3□□□□□ -1.88
CEP290-208ENST00000604024 NAGPAQ9UK23 515 aa3.3□□□□□ -1.88
CEP290-208ENST00000604024 CPB1P15086 417 aa3.3□□□□□ -1.88
CEP290-208ENST00000604024 GRNP28799 593 aaKnown RBP3.3□□□□□ -1.88
CEP290-208ENST00000604024 HYAL2Q12891 473 aa3.3□□□□□ -1.88
CEP290-208ENST00000604024 FNBP4Q8N3X1 1017 aaPredicted RBP3.3□□□□□ -1.88
CEP290-208ENST00000604024 OSGEPQ9NPF4 335 aa3.3□□□□□ -1.88
CEP290-208ENST00000604024 ZFATQ9P243 1243 aa3.3□□□□□ -1.88
CEP290-208ENST00000604024 USP17L15C9J2P7 530 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 USP17L10C9JJH3 530 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 USP17L13C9JLJ4 530 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 USP17L12C9JPN9 530 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 USP17L11C9JVI0 530 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 USP17L21D6R901 530 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 USP17L18D6R9N7 530 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 USP17L22D6RA61 530 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 USP17L17D6RBQ6 530 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 USP17L19D6RCP7 530 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 USP17L20D6RJB6 530 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 IRAK1P51617 712 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 USP17L24Q0WX57 530 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 TPRNQ4KMQ1 711 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.29□□□□□ -1.88
CEP290-208ENST00000604024 SMG9Q9H0W8 520 aaKnown RBP3.29□□□□□ -1.88
CEP290-208ENST00000604024 FNDC3AQ9Y2H6 1198 aaKnown RBP3.29□□□□□ -1.88
CEP290-208ENST00000604024 POM121CA8CG34 1229 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 OPLAHO14841 1288 aa3.29□□□□□ -1.88
CEP290-208ENST00000604024 DHX15O43143 795 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms