RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 GRM8O00222 908 aa24.74■■□□□ 1.55
LSM4-203ENST00000593829 FRAT1Q92837 279 aaPredicted RBP24.74■■□□□ 1.55
LSM4-203ENST00000593829 ABCC4O15439 1325 aa24.74■■□□□ 1.55
LSM4-203ENST00000593829 SOGA3Q5TF21 947 aa24.74■■□□□ 1.55
LSM4-203ENST00000593829 C7orf43Q8WVR3 580 aa24.74■■□□□ 1.55
LSM4-203ENST00000593829 CACNA1SQ13698 1873 aa24.74■■□□□ 1.55
LSM4-203ENST00000593829 CCDC152Q4G0S7 254 aa24.73■■□□□ 1.55
LSM4-203ENST00000593829 CCT4P50991 539 aaKnown RBP24.73■■□□□ 1.55
LSM4-203ENST00000593829 PLA2G12BQ9BX93 195 aa24.73■■□□□ 1.55
LSM4-203ENST00000593829 CTSWP56202 376 aa24.72■■□□□ 1.55
LSM4-203ENST00000593829 ATF7IPQ6VMQ6 1270 aa24.72■■□□□ 1.55
LSM4-203ENST00000593829 BBOX1O75936 387 aa24.71■■□□□ 1.55
LSM4-203ENST00000593829 GRAPQ13588 217 aa24.71■■□□□ 1.55
LSM4-203ENST00000593829 GRAPLQ8TC17 118 aaPredicted RBP24.71■■□□□ 1.55
LSM4-203ENST00000593829 PPEF1O14829 653 aaPredicted RBP24.71■■□□□ 1.55
LSM4-203ENST00000593829 TRIM27P14373 513 aa24.7■■□□□ 1.54
LSM4-203ENST00000593829 ZKSCAN2Q63HK3 967 aa24.7■■□□□ 1.54
LSM4-203ENST00000593829 TTLL11Q8NHH1 800 aa24.7■■□□□ 1.54
LSM4-203ENST00000593829 CCDC93Q567U6 631 aa24.69■■□□□ 1.54
LSM4-203ENST00000593829 CCDC85AQ96PX6 553 aaPredicted RBP24.69■■□□□ 1.54
LSM4-203ENST00000593829 CC2D2BQ6DHV5 1058 aa24.69■■□□□ 1.54
LSM4-203ENST00000593829 UTYO14607 1347 aa24.68■■□□□ 1.54
LSM4-203ENST00000593829 IRX6P78412 446 aaPredicted RBP24.68■■□□□ 1.54
LSM4-203ENST00000593829 OLFM4Q6UX06 510 aa24.68■■□□□ 1.54
LSM4-203ENST00000593829 RCAN3Q9UKA8 241 aa24.68■■□□□ 1.54
LSM4-203ENST00000593829 CHD4Q14839 1912 aa24.68■■□□□ 1.54
LSM4-203ENST00000593829 NBPF7P0C2Y1 421 aaPredicted RBP24.67■■□□□ 1.54
LSM4-203ENST00000593829 TMC4Q7Z404 712 aa24.67■■□□□ 1.54
LSM4-203ENST00000593829 RTKN2Q8IZC4 609 aa24.67■■□□□ 1.54
LSM4-203ENST00000593829 TMX4Q9H1E5 349 aaPredicted RBP24.67■■□□□ 1.54
LSM4-203ENST00000593829 ATP6V0A2Q9Y487 856 aa24.67■■□□□ 1.54
LSM4-203ENST00000593829 NFKBIEO00221 500 aa24.67■■□□□ 1.54
LSM4-203ENST00000593829 CELF1Q92879 486 aaKnown RBP24.67■■□□□ 1.54
LSM4-203ENST00000593829 USP44Q9H0E7 712 aa24.67■■□□□ 1.54
LSM4-203ENST00000593829 SEC31BQ9NQW1 1179 aa24.67■■□□□ 1.54
LSM4-203ENST00000593829 INTS3Q68E01 1043 aaKnown RBP24.66■■□□□ 1.54
LSM4-203ENST00000593829 MYH3P11055 1940 aa24.65■■□□□ 1.54
LSM4-203ENST00000593829 RTL9Q8NET4 1388 aa24.65■■□□□ 1.54
LSM4-203ENST00000593829 CSF1RP07333 972 aa24.65■■□□□ 1.54
LSM4-203ENST00000593829 RPS8P62241 208 aaKnown RBP24.65■■□□□ 1.54
LSM4-203ENST00000593829 FOXO4P98177 505 aa24.65■■□□□ 1.54
LSM4-203ENST00000593829 RASSF7Q02833 373 aa24.65■■□□□ 1.54
LSM4-203ENST00000593829 GRIPAP1Q4V328 841 aa24.65■■□□□ 1.54
LSM4-203ENST00000593829 SP8Q8IXZ3 490 aa24.65■■□□□ 1.54
LSM4-203ENST00000593829 CLUAP1Q96AJ1 413 aa24.65■■□□□ 1.54
LSM4-203ENST00000593829 TAOK3Q9H2K8 898 aa24.65■■□□□ 1.54
LSM4-203ENST00000593829 GREM2Q9H772 168 aa24.65■■□□□ 1.54
LSM4-203ENST00000593829 TNNQ9UQP3 1299 aa24.65■■□□□ 1.54
LSM4-203ENST00000593829 LTBP3Q9NS15 1303 aa24.64■■□□□ 1.53
LSM4-203ENST00000593829 TAF1P21675 1872 aa24.64■■□□□ 1.53
LSM4-203ENST00000593829 YY1P25490 414 aa24.63■■□□□ 1.53
LSM4-203ENST00000593829 SUCLG2Q96I99 432 aa24.63■■□□□ 1.53
LSM4-203ENST00000593829 CDC5LQ99459 802 aaKnown RBP24.63■■□□□ 1.53
LSM4-203ENST00000593829 FER1L6Q2WGJ9 1857 aa24.63■■□□□ 1.53
LSM4-203ENST00000593829 LMNB1P20700 586 aa24.62■■□□□ 1.53
LSM4-203ENST00000593829 EPHA10Q5JZY3 1008 aa24.62■■□□□ 1.53
LSM4-203ENST00000593829 C9orf131Q5VYM1 1079 aa24.62■■□□□ 1.53
LSM4-203ENST00000593829 FKBP4Q02790 459 aaKnown RBP eCLIP24.61■■□□□ 1.53
LSM4-203ENST00000593829 FAM161AQ3B820 660 aa24.61■■□□□ 1.53
LSM4-203ENST00000593829 LMBR1LQ6UX01 489 aa24.61■■□□□ 1.53
LSM4-203ENST00000593829 SLC51AQ86UW1 340 aa24.61■■□□□ 1.53
LSM4-203ENST00000593829 ANKRD18AQ8IVF6 992 aa24.61■■□□□ 1.53
LSM4-203ENST00000593829 FTSJ3Q8IY81 847 aaKnown RBP24.61■■□□□ 1.53
LSM4-203ENST00000593829 ITGA6P23229 1130 aa24.61■■□□□ 1.53
LSM4-203ENST00000593829 ERICH6Q7L0X2 663 aa24.61■■□□□ 1.53
LSM4-203ENST00000593829 KAZALD1Q96I82 304 aa24.61■■□□□ 1.53
LSM4-203ENST00000593829 CHMP3Q9Y3E7 222 aa24.61■■□□□ 1.53
LSM4-203ENST00000593829 SNED1Q8TER0 1413 aa24.61■■□□□ 1.53
LSM4-203ENST00000593829 DZIP1LQ8IYY4 767 aaKnown RBP24.6■■□□□ 1.53
LSM4-203ENST00000593829 PSMD1Q99460 953 aa24.6■■□□□ 1.53
LSM4-203ENST00000593829 RNF181Q9P0P0 153 aa24.6■■□□□ 1.53
LSM4-203ENST00000593829 COL4A1P02462 1669 aa24.6■■□□□ 1.53
LSM4-203ENST00000593829 PRELPP51888 382 aa24.59■■□□□ 1.53
LSM4-203ENST00000593829 UBTFL1P0CB47 393 aaPredicted RBP24.59■■□□□ 1.53
LSM4-203ENST00000593829 IFIT5Q13325 482 aaKnown RBP24.59■■□□□ 1.53
LSM4-203ENST00000593829 TMEM57Q8N5G2 664 aa24.59■■□□□ 1.53
LSM4-203ENST00000593829 BICC1Q9H694 974 aaKnown RBP24.59■■□□□ 1.53
LSM4-203ENST00000593829 HDAC5Q9UQL6 1122 aa24.59■■□□□ 1.53
LSM4-203ENST00000593829 ANKRD18BA2A2Z9 1011 aa24.58■■□□□ 1.53
LSM4-203ENST00000593829 SBF1O95248 1867 aa24.57■■□□□ 1.52
LSM4-203ENST00000593829 DPP8Q6V1X1 898 aaPredicted RBP24.57■■□□□ 1.52
LSM4-203ENST00000593829 MPNDQ8N594 471 aa24.57■■□□□ 1.52
LSM4-203ENST00000593829 MS4A1P11836 297 aa24.57■■□□□ 1.52
LSM4-203ENST00000593829 IGHMBP2P38935 993 aaKnown RBP24.57■■□□□ 1.52
LSM4-203ENST00000593829 MEIS3Q99687 375 aa24.57■■□□□ 1.52
LSM4-203ENST00000593829 ZNF277Q9NRM2 450 aaPredicted RBP24.57■■□□□ 1.52
LSM4-203ENST00000593829 GNAI3P08754 354 aa24.56■■□□□ 1.52
LSM4-203ENST00000593829 CCDC57Q2TAC2 916 aa24.56■■□□□ 1.52
LSM4-203ENST00000593829 RABL6Q3YEC7 729 aaPredicted RBP24.56■■□□□ 1.52
LSM4-203ENST00000593829 BSDC1Q9NW68 430 aaPredicted RBP24.56■■□□□ 1.52
LSM4-203ENST00000593829 LRRC37AA6NMS7 1700 aa24.56■■□□□ 1.52
LSM4-203ENST00000593829 ANKRD44Q8N8A2 993 aa24.55■■□□□ 1.52
LSM4-203ENST00000593829 RLBP1P12271 317 aa24.55■■□□□ 1.52
LSM4-203ENST00000593829 SUPT20HQ8NEM7 779 aa24.55■■□□□ 1.52
LSM4-203ENST00000593829 NSFL1CQ9UNZ2 370 aaKnown RBP24.55■■□□□ 1.52
LSM4-203ENST00000593829 MPHOSPH8Q99549 860 aa24.54■■□□□ 1.52
LSM4-203ENST00000593829 RTFDC1Q9BY42 306 aaPredicted RBP24.54■■□□□ 1.52
LSM4-203ENST00000593829 IARSP41252 1262 aaKnown RBP24.53■■□□□ 1.52
LSM4-203ENST00000593829 GPSM2P81274 684 aa24.53■■□□□ 1.52
LSM4-203ENST00000593829 TAF7LQ5H9L4 462 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms