RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 PA2G4Q9UQ80 394 aaKnown RBP17.42■□□□□ 0.38
NLE1-205ENST00000588642 ANKRD36CQ5JPF3 1778 aa17.42■□□□□ 0.38
NLE1-205ENST00000588642 RFX5P48382 616 aaPredicted RBP17.41■□□□□ 0.38
NLE1-205ENST00000588642 G3BP1Q13283 466 aaKnown RBP eCLIP17.41■□□□□ 0.38
NLE1-205ENST00000588642 IFIT5Q13325 482 aaKnown RBP17.41■□□□□ 0.38
NLE1-205ENST00000588642 FAM161AQ3B820 660 aa17.41■□□□□ 0.38
NLE1-205ENST00000588642 CCDC152Q4G0S7 254 aa17.41■□□□□ 0.38
NLE1-205ENST00000588642 TAF7LQ5H9L4 462 aa17.41■□□□□ 0.38
NLE1-205ENST00000588642 PRR5LQ6MZQ0 368 aa17.41■□□□□ 0.38
NLE1-205ENST00000588642 SLC16A10Q8TF71 515 aa17.41■□□□□ 0.38
NLE1-205ENST00000588642 NLRP3Q96P20 1036 aa17.41■□□□□ 0.38
NLE1-205ENST00000588642 PDGFDQ9GZP0 370 aaPredicted RBP17.41■□□□□ 0.38
NLE1-205ENST00000588642 ANKRD18BA2A2Z9 1011 aa17.4■□□□□ 0.38
NLE1-205ENST00000588642 RAB11FIP3O75154 756 aa17.4■□□□□ 0.38
NLE1-205ENST00000588642 NUCB1Q02818 461 aa17.4■□□□□ 0.38
NLE1-205ENST00000588642 R3HDM1Q15032 1099 aaKnown RBP17.4■□□□□ 0.38
NLE1-205ENST00000588642 KLHDC4Q8TBB5 520 aa17.4■□□□□ 0.38
NLE1-205ENST00000588642 BCL11AQ9H165 835 aa17.4■□□□□ 0.38
NLE1-205ENST00000588642 SIL1Q9H173 461 aa17.4■□□□□ 0.38
NLE1-205ENST00000588642 GREM2Q9H772 168 aa17.4■□□□□ 0.38
NLE1-205ENST00000588642 COPRSQ9NQ92 184 aa17.4■□□□□ 0.38
NLE1-205ENST00000588642 NOP58Q9Y2X3 529 aaKnown RBP17.4■□□□□ 0.38
NLE1-205ENST00000588642 ABCC12Q96J65 1359 aa17.4■□□□□ 0.38
NLE1-205ENST00000588642 ITGA6P23229 1130 aa17.39■□□□□ 0.37
NLE1-205ENST00000588642 PTPN12Q05209 780 aaKnown RBP17.39■□□□□ 0.37
NLE1-205ENST00000588642 SF3B3Q15393 1217 aaKnown RBP17.39■□□□□ 0.37
NLE1-205ENST00000588642 C3orf67Q6ZVT6 689 aa17.38■□□□□ 0.37
NLE1-205ENST00000588642 CHD1LQ86WJ1 897 aa17.38■□□□□ 0.37
NLE1-205ENST00000588642 ZNF594Q96JF6 807 aaPredicted RBP17.38■□□□□ 0.37
NLE1-205ENST00000588642 SMARCA5O60264 1052 aaPredicted RBP17.37■□□□□ 0.37
NLE1-205ENST00000588642 ERC1Q8IUD2 1116 aa17.37■□□□□ 0.37
NLE1-205ENST00000588642 LRRCC1Q9C099 1032 aa17.37■□□□□ 0.37
NLE1-205ENST00000588642 LNPKQ9C0E8 428 aa17.37■□□□□ 0.37
NLE1-205ENST00000588642 SKAP1Q86WV1 359 aa17.36■□□□□ 0.37
NLE1-205ENST00000588642 KIF1BPQ96EK5 621 aa17.36■□□□□ 0.37
NLE1-205ENST00000588642 SEC31BQ9NQW1 1179 aa17.36■□□□□ 0.37
NLE1-205ENST00000588642 TUBGCP6Q96RT7 1819 aa17.35■□□□□ 0.37
NLE1-205ENST00000588642 EYA2O00167 538 aa17.35■□□□□ 0.37
NLE1-205ENST00000588642 RHPN1Q8TCX5 695 aa17.35■□□□□ 0.37
NLE1-205ENST00000588642 PSDA5PKW4 1024 aaPredicted RBP17.34■□□□□ 0.37
NLE1-205ENST00000588642 ZBTB7AO95365 584 aa17.34■□□□□ 0.37
NLE1-205ENST00000588642 IL15P40933 162 aaPredicted RBP17.34■□□□□ 0.37
NLE1-205ENST00000588642 RGS3P49796 1198 aa17.34■□□□□ 0.37
NLE1-205ENST00000588642 LDHAL6AQ6ZMR3 332 aa17.34■□□□□ 0.37
NLE1-205ENST00000588642 RTL9Q8NET4 1388 aa17.34■□□□□ 0.37
NLE1-205ENST00000588642 CDC5LQ99459 802 aaKnown RBP17.34■□□□□ 0.37
NLE1-205ENST00000588642 BRIP1Q9BX63 1249 aa17.34■□□□□ 0.37
NLE1-205ENST00000588642 PUS3Q9BZE2 481 aaKnown RBP17.34■□□□□ 0.37
NLE1-205ENST00000588642 FBXO3Q9UK99 471 aa17.34■□□□□ 0.37
NLE1-205ENST00000588642 ATF5Q9Y2D1 282 aaPredicted RBP17.34■□□□□ 0.37
NLE1-205ENST00000588642 COL24A1Q17RW2 1714 aa17.33■□□□□ 0.37
NLE1-205ENST00000588642 CIAO1O76071 339 aa17.33■□□□□ 0.36
NLE1-205ENST00000588642 IGHMBP2P38935 993 aaKnown RBP17.33■□□□□ 0.36
NLE1-205ENST00000588642 LRRC24Q50LG9 513 aa17.33■□□□□ 0.36
NLE1-205ENST00000588642 DDX46Q7L014 1031 aaKnown RBP17.33■□□□□ 0.36
NLE1-205ENST00000588642 RPGRQ92834 1020 aaKnown RBP17.33■□□□□ 0.36
NLE1-205ENST00000588642 MPHOSPH8Q99549 860 aa17.33■□□□□ 0.36
NLE1-205ENST00000588642 IL1RAPL2Q9NP60 686 aa17.33■□□□□ 0.36
NLE1-205ENST00000588642 CNNM1Q9NRU3 951 aa17.33■□□□□ 0.36
NLE1-205ENST00000588642 SASH1O94885 1247 aa17.32■□□□□ 0.36
NLE1-205ENST00000588642 ATG9AQ7Z3C6 839 aa17.32■□□□□ 0.36
NLE1-205ENST00000588642 ANKRD18AQ8IVF6 992 aa17.32■□□□□ 0.36
NLE1-205ENST00000588642 C16orf71Q8IYS4 520 aaPredicted RBP17.32■□□□□ 0.36
NLE1-205ENST00000588642 MTFR1LQ9H019 292 aa17.32■□□□□ 0.36
NLE1-205ENST00000588642 RIC1Q4ADV7 1423 aa17.31■□□□□ 0.36
NLE1-205ENST00000588642 PDE4AP27815 886 aa17.31■□□□□ 0.36
NLE1-205ENST00000588642 POLD1P28340 1107 aa17.31■□□□□ 0.36
NLE1-205ENST00000588642 PDE6BP35913 854 aa17.31■□□□□ 0.36
NLE1-205ENST00000588642 TFCP2Q12800 502 aa17.31■□□□□ 0.36
NLE1-205ENST00000588642 CLASRPQ8N2M8 674 aaKnown RBP17.31■□□□□ 0.36
NLE1-205ENST00000588642 RBM17Q96I25 401 aaKnown RBP17.31■□□□□ 0.36
NLE1-205ENST00000588642 CEP126Q9P2H0 1117 aa17.31■□□□□ 0.36
NLE1-205ENST00000588642 QSER1Q2KHR3 1735 aa17.3■□□□□ 0.36
NLE1-205ENST00000588642 KLRG2A4D1S0 409 aaPredicted RBP17.3■□□□□ 0.36
NLE1-205ENST00000588642 RPS8P62241 208 aaKnown RBP17.3■□□□□ 0.36
NLE1-205ENST00000588642 RIPOR2Q9Y4F9 1068 aa17.3■□□□□ 0.36
NLE1-205ENST00000588642 CRY2Q49AN0 593 aa17.29■□□□□ 0.36
NLE1-205ENST00000588642 METTL24Q5JXM2 366 aa17.29■□□□□ 0.36
NLE1-205ENST00000588642 CELF1Q92879 486 aaKnown RBP17.29■□□□□ 0.36
NLE1-205ENST00000588642 IFIT2P09913 472 aaKnown RBP17.28■□□□□ 0.36
NLE1-205ENST00000588642 AACSQ86V21 672 aa17.28■□□□□ 0.36
NLE1-205ENST00000588642 PELP1Q8IZL8 1130 aaKnown RBP17.28■□□□□ 0.36
NLE1-205ENST00000588642 BSDC1Q9NW68 430 aaPredicted RBP17.28■□□□□ 0.36
NLE1-205ENST00000588642 DDX60Q8IY21 1712 aaKnown RBP17.27■□□□□ 0.36
NLE1-205ENST00000588642 MROH5Q6ZUA9 1318 aa17.27■□□□□ 0.36
NLE1-205ENST00000588642 HOXA10P31260 410 aaPredicted RBP17.27■□□□□ 0.36
NLE1-205ENST00000588642 GRAPQ13588 217 aa17.27■□□□□ 0.36
NLE1-205ENST00000588642 C2CD5Q86YS7 1000 aa17.27■□□□□ 0.36
NLE1-205ENST00000588642 GRAPLQ8TC17 118 aaPredicted RBP17.27■□□□□ 0.36
NLE1-205ENST00000588642 OTUD7AQ8TE49 926 aaPredicted RBP17.27■□□□□ 0.36
NLE1-205ENST00000588642 H0YIN7 160 aa17.26■□□□□ 0.35
NLE1-205ENST00000588642 NPR1P16066 1061 aa17.26■□□□□ 0.35
NLE1-205ENST00000588642 PLEKHM2Q8IWE5 1019 aa17.26■□□□□ 0.35
NLE1-205ENST00000588642 EAF2Q96CJ1 260 aaPredicted RBP17.26■□□□□ 0.35
NLE1-205ENST00000588642 CRAMP1Q96RY5 1269 aa17.26■□□□□ 0.35
NLE1-205ENST00000588642 CCDC8Q9H0W5 538 aaPredicted RBP17.26■□□□□ 0.35
NLE1-205ENST00000588642 GPR108Q9NPR9 543 aa17.26■□□□□ 0.35
NLE1-205ENST00000588642 AKAP2Q9Y2D5 859 aa17.26■□□□□ 0.35
NLE1-205ENST00000588642 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.26■□□□□ 0.35
NLE1-205ENST00000588642 SRGNP10124 158 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms