RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 CHRNA4P43681 627 aa7.42□□□□□ -1.22
PPP4R1-227ENST00000583988 NAA30Q147X3 362 aaPredicted RBP7.42□□□□□ -1.22
PPP4R1-227ENST00000583988 CAPN12Q6ZSI9 719 aa7.42□□□□□ -1.22
PPP4R1-227ENST00000583988 CD163Q86VB7 1156 aa7.42□□□□□ -1.22
PPP4R1-227ENST00000583988 TREML1Q86YW5 311 aa7.42□□□□□ -1.22
PPP4R1-227ENST00000583988 RGL4Q8IZJ4 473 aa7.42□□□□□ -1.22
PPP4R1-227ENST00000583988 TRAIPQ9BWF2 469 aa7.42□□□□□ -1.22
PPP4R1-227ENST00000583988 JPH1Q9HDC5 661 aaPredicted RBP7.42□□□□□ -1.22
PPP4R1-227ENST00000583988 OPLAHO14841 1288 aa7.41□□□□□ -1.22
PPP4R1-227ENST00000583988 SPATA31C1P0DKV0 1188 aa7.41□□□□□ -1.22
PPP4R1-227ENST00000583988 RARAP10276 462 aa7.41□□□□□ -1.22
PPP4R1-227ENST00000583988 ATP2B4P23634 1241 aa7.41□□□□□ -1.22
PPP4R1-227ENST00000583988 PRRT3Q5FWE3 981 aa7.41□□□□□ -1.22
PPP4R1-227ENST00000583988 C16orf46Q6P387 395 aa7.41□□□□□ -1.22
PPP4R1-227ENST00000583988 C20orf204Q6ZNR8 217 aa7.41□□□□□ -1.22
PPP4R1-227ENST00000583988 CMTR1Q8N1G2 835 aaKnown RBP7.41□□□□□ -1.22
PPP4R1-227ENST00000583988 COL26A1Q96A83 441 aa7.41□□□□□ -1.22
PPP4R1-227ENST00000583988 ZFATQ9P243 1243 aa7.41□□□□□ -1.22
PPP4R1-227ENST00000583988 RTCBQ9Y3I0 505 aaKnown RBP7.41□□□□□ -1.22
PPP4R1-227ENST00000583988 MLLT1Q03111 559 aaPredicted RBP7.4□□□□□ -1.22
PPP4R1-227ENST00000583988 COL9A3Q14050 684 aaPredicted RBP7.4□□□□□ -1.22
PPP4R1-227ENST00000583988 PHLDB3Q6NSJ2 640 aa7.4□□□□□ -1.22
PPP4R1-227ENST00000583988 PSAPL1Q6NUJ1 521 aa7.4□□□□□ -1.22
PPP4R1-227ENST00000583988 FAM35AQ86V20 835 aa7.4□□□□□ -1.22
PPP4R1-227ENST00000583988 PRDM6Q9NQX0 595 aa7.4□□□□□ -1.22
PPP4R1-227ENST00000583988 NAGPAQ9UK23 515 aa7.4□□□□□ -1.22
PPP4R1-227ENST00000583988 XYLBO75191 536 aa7.39□□□□□ -1.23
PPP4R1-227ENST00000583988 PDIA4P13667 645 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-227ENST00000583988 NID1P14543 1247 aa7.39□□□□□ -1.23
PPP4R1-227ENST00000583988 CPB1P15086 417 aa7.39□□□□□ -1.23
PPP4R1-227ENST00000583988 TRIM28Q13263 835 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-227ENST00000583988 TRAPPC3LQ5T215 181 aa7.39□□□□□ -1.23
PPP4R1-227ENST00000583988 DHX32Q7L7V1 743 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-227ENST00000583988 ETFBKMTQ8IXQ9 262 aa7.39□□□□□ -1.23
PPP4R1-227ENST00000583988 BRD2P25440 801 aaKnown RBP7.38□□□□□ -1.23
PPP4R1-227ENST00000583988 BAG6P46379 1132 aa7.38□□□□□ -1.23
PPP4R1-227ENST00000583988 LOC100996750A0A140TA64 210 aa7.37□□□□□ -1.23
PPP4R1-227ENST00000583988 ZBTB42B2RXF5 422 aa7.37□□□□□ -1.23
PPP4R1-227ENST00000583988 PTCD1O75127 700 aaKnown RBP7.37□□□□□ -1.23
PPP4R1-227ENST00000583988 RGS9O75916 674 aaPredicted RBP7.37□□□□□ -1.23
PPP4R1-227ENST00000583988 MAP3K6O95382 1288 aa7.37□□□□□ -1.23
PPP4R1-227ENST00000583988 PCSK7Q16549 785 aa7.37□□□□□ -1.23
PPP4R1-227ENST00000583988 FAM26DQ5JW98 314 aa7.37□□□□□ -1.23
PPP4R1-227ENST00000583988 B4GALNT3Q6L9W6 998 aa7.37□□□□□ -1.23
PPP4R1-227ENST00000583988 HFE2Q6ZVN8 426 aa7.37□□□□□ -1.23
PPP4R1-227ENST00000583988 KRTAP4-6Q9BYQ5 205 aa7.37□□□□□ -1.23
PPP4R1-227ENST00000583988 PATL2C9JE40 543 aaKnown RBP7.36□□□□□ -1.23
PPP4R1-227ENST00000583988 APBA3O96018 575 aa7.36□□□□□ -1.23
PPP4R1-227ENST00000583988 FURINP09958 794 aa7.36□□□□□ -1.23
PPP4R1-227ENST00000583988 AFF1P51825 1210 aaKnown RBP7.36□□□□□ -1.23
PPP4R1-227ENST00000583988 GRIK4Q16099 956 aa7.36□□□□□ -1.23
PPP4R1-227ENST00000583988 C11orf16Q9NQ32 467 aa7.36□□□□□ -1.23
PPP4R1-227ENST00000583988 KCNMB2Q9Y691 235 aa7.36□□□□□ -1.23
PPP4R1-227ENST00000583988 TNFRSF10BO14763 440 aa7.35□□□□□ -1.23
PPP4R1-227ENST00000583988 ARID4AP29374 1257 aaPredicted RBP7.35□□□□□ -1.23
PPP4R1-227ENST00000583988 PERM1Q5SV97 790 aa7.35□□□□□ -1.23
PPP4R1-227ENST00000583988 ELMSAN1Q6PJG2 1045 aa7.35□□□□□ -1.23
PPP4R1-227ENST00000583988 TRPM4Q8TD43 1214 aa7.35□□□□□ -1.23
PPP4R1-227ENST00000583988 ADAM23O75077 832 aa7.34□□□□□ -1.23
PPP4R1-227ENST00000583988 BRD1O95696 1058 aa7.34□□□□□ -1.23
PPP4R1-227ENST00000583988 EGFRP00533 1210 aa7.34□□□□□ -1.23
PPP4R1-227ENST00000583988 EIF2AK2P19525 551 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-227ENST00000583988 SCNN1AP37088 669 aa7.34□□□□□ -1.23
PPP4R1-227ENST00000583988 DMRTC2Q8IXT2 367 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-227ENST00000583988 TLR7Q9NYK1 1049 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-227ENST00000583988 A0A0A0MRY4 1105 aa7.33□□□□□ -1.24
PPP4R1-227ENST00000583988 K7ELQ4 463 aaPredicted RBP7.33□□□□□ -1.24
PPP4R1-227ENST00000583988 MMP20O60882 483 aa7.33□□□□□ -1.24
PPP4R1-227ENST00000583988 PSAPP07602 524 aa7.33□□□□□ -1.24
PPP4R1-227ENST00000583988 GATA4P43694 442 aa7.33□□□□□ -1.24
PPP4R1-227ENST00000583988 RAC1P63000 192 aa7.33□□□□□ -1.24
PPP4R1-227ENST00000583988 GPLD1P80108 840 aa7.33□□□□□ -1.24
PPP4R1-227ENST00000583988 PLAURQ03405 335 aa7.33□□□□□ -1.24
PPP4R1-227ENST00000583988 DOC2BQ14184 412 aa7.33□□□□□ -1.24
PPP4R1-227ENST00000583988 PIK3R5Q8WYR1 880 aa7.33□□□□□ -1.24
PPP4R1-227ENST00000583988 NSUN5Q96P11 429 aaKnown RBP7.33□□□□□ -1.24
PPP4R1-227ENST00000583988 LPIN3Q9BQK8 851 aa7.33□□□□□ -1.24
PPP4R1-227ENST00000583988 STIM2Q9P246 746 aa7.33□□□□□ -1.24
PPP4R1-227ENST00000583988 SEPT3Q9UH03 358 aa7.33□□□□□ -1.24
PPP4R1-227ENST00000583988 UBAP1LF5GYI3 381 aa7.32□□□□□ -1.24
PPP4R1-227ENST00000583988 J3QW42 95 aa7.32□□□□□ -1.24
PPP4R1-227ENST00000583988 ZBTB39O15060 712 aa7.32□□□□□ -1.24
PPP4R1-227ENST00000583988 ZAP70P43403 619 aa7.32□□□□□ -1.24
PPP4R1-227ENST00000583988 TRIP4Q15650 581 aaPredicted RBP7.32□□□□□ -1.24
PPP4R1-227ENST00000583988 GPR152Q8TDT2 470 aa7.32□□□□□ -1.24
PPP4R1-227ENST00000583988 NACC1Q96RE7 527 aa7.32□□□□□ -1.24
PPP4R1-227ENST00000583988 SMG9Q9H0W8 520 aaKnown RBP7.32□□□□□ -1.24
PPP4R1-227ENST00000583988 ELNP15502 786 aa7.31□□□□□ -1.24
PPP4R1-227ENST00000583988 NRLP54845 237 aa7.31□□□□□ -1.24
PPP4R1-227ENST00000583988 MSL1Q68DK7 614 aa7.31□□□□□ -1.24
PPP4R1-227ENST00000583988 NLRP13Q86W25 1043 aa7.31□□□□□ -1.24
PPP4R1-227ENST00000583988 FAM13BQ9NYF5 915 aa7.31□□□□□ -1.24
PPP4R1-227ENST00000583988 FRRS1LQ9P0K9 344 aa7.31□□□□□ -1.24
PPP4R1-227ENST00000583988 LOC102724428A0A0B4J2F2 783 aa7.3□□□□□ -1.24
PPP4R1-227ENST00000583988 SIK1P57059 783 aa7.3□□□□□ -1.24
PPP4R1-227ENST00000583988 SHISA2Q6UWI4 295 aa7.3□□□□□ -1.24
PPP4R1-227ENST00000583988 TXNDC2Q86VQ3 553 aa7.3□□□□□ -1.24
PPP4R1-227ENST00000583988 MTMR7Q9Y216 660 aa7.3□□□□□ -1.24
PPP4R1-227ENST00000583988 GHRHP01286 108 aa7.29□□□□□ -1.24
PPP4R1-227ENST00000583988 KCNA1Q09470 495 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms