RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	TARS	P26639	723 aa	Known RBP	5.78	□□□□□ -1.48
MSI2-215	ENST00000582453	SERPINB4	P48594	390 aa		5.78	□□□□□ -1.48
MSI2-215	ENST00000582453	ZNF211	Q13398	564 aa	Predicted RBP	5.78	□□□□□ -1.48
MSI2-215	ENST00000582453	TRIP4	Q15650	581 aa	Predicted RBP	5.78	□□□□□ -1.48
MSI2-215	ENST00000582453	PCSK7	Q16549	785 aa		5.78	□□□□□ -1.48
MSI2-215	ENST00000582453	KANK3	Q6NY19	840 aa		5.78	□□□□□ -1.48
MSI2-215	ENST00000582453	PODN	Q7Z5L7	613 aa		5.78	□□□□□ -1.48
MSI2-215	ENST00000582453	CCER1	Q8TC90	406 aa	Predicted RBP	5.78	□□□□□ -1.48
MSI2-215	ENST00000582453	TRAIP	Q9BWF2	469 aa		5.78	□□□□□ -1.48
MSI2-215	ENST00000582453	ZFAT	Q9P243	1243 aa		5.78	□□□□□ -1.48
MSI2-215	ENST00000582453	GNE	Q9Y223	722 aa	Known RBP	5.78	□□□□□ -1.48
MSI2-215	ENST00000582453	PCSK2	P16519	638 aa		5.77	□□□□□ -1.49
MSI2-215	ENST00000582453	MZF1	P28698	734 aa	Predicted RBP	5.77	□□□□□ -1.49
MSI2-215	ENST00000582453	KRT25	Q7Z3Z0	450 aa		5.77	□□□□□ -1.49
MSI2-215	ENST00000582453	NLRP13	Q86W25	1043 aa		5.77	□□□□□ -1.49
MSI2-215	ENST00000582453	ATCAY	Q86WG3	371 aa		5.77	□□□□□ -1.49
MSI2-215	ENST00000582453	BEND7	Q8N7W2	519 aa	Predicted RBP	5.77	□□□□□ -1.49
MSI2-215	ENST00000582453	NUDT16	Q96DE0	195 aa	Known RBP	5.77	□□□□□ -1.49
MSI2-215	ENST00000582453	UBE2O	Q9C0C9	1292 aa	Known RBP	5.77	□□□□□ -1.49
MSI2-215	ENST00000582453	RRAGC	Q9HB90	399 aa		5.77	□□□□□ -1.49
MSI2-215	ENST00000582453	ANO2	Q9NQ90	1003 aa		5.77	□□□□□ -1.49
MSI2-215	ENST00000582453	DNAJB12	Q9NXW2	375 aa	Known RBP	5.77	□□□□□ -1.49
MSI2-215	ENST00000582453	MKL2	Q9ULH7	1088 aa		5.77	□□□□□ -1.49
MSI2-215	ENST00000582453	PHF20L1	A8MW92	1017 aa		5.76	□□□□□ -1.49
MSI2-215	ENST00000582453		H3BRB1	525 aa		5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	PIK3R2	O00459	728 aa		5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	PSAP	P07602	524 aa		5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	HOXB4	P17483	251 aa	Predicted RBP	5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	DGKG	P49619	791 aa		5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	DNM1	Q05193	864 aa	Known RBP	5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	TBC1D8B	Q0IIM8	1120 aa		5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	PDE12	Q6L8Q7	609 aa	Known RBP	5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	DHX32	Q7L7V1	743 aa	Known RBP	5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	GLYCTK	Q8IVS8	523 aa		5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	TRPM4	Q8TD43	1214 aa		5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	EDEM1	Q92611	657 aa		5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	IGFLR1	Q9H665	355 aa		5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	TUT1	Q9H6E5	874 aa	Known RBP	5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	TLR7	Q9NYK1	1049 aa	Known RBP	5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	SLC6A14	Q9UN76	642 aa		5.76	□□□□□ -1.49
MSI2-215	ENST00000582453	ABCC9	O60706	1549 aa		5.75	□□□□□ -1.49
MSI2-215	ENST00000582453	MMP20	O60882	483 aa		5.75	□□□□□ -1.49
MSI2-215	ENST00000582453	PDGFA	P04085	211 aa		5.75	□□□□□ -1.49
MSI2-215	ENST00000582453	HOXD8	P13378	290 aa	Predicted RBP	5.75	□□□□□ -1.49
MSI2-215	ENST00000582453	SOX18	P35713	384 aa		5.75	□□□□□ -1.49
MSI2-215	ENST00000582453	USP5	P45974	858 aa		5.75	□□□□□ -1.49
MSI2-215	ENST00000582453	NRL	P54845	237 aa		5.75	□□□□□ -1.49
MSI2-215	ENST00000582453	SNRPN	P63162	240 aa	Known RBP	5.75	□□□□□ -1.49
MSI2-215	ENST00000582453	GPLD1	P80108	840 aa		5.75	□□□□□ -1.49
MSI2-215	ENST00000582453	AAMP	Q13685	434 aa		5.75	□□□□□ -1.49
MSI2-215	ENST00000582453	CNTNAP5	Q8WYK1	1306 aa		5.74	□□□□□ -1.49
MSI2-215	ENST00000582453	FZD6	O60353	706 aa		5.74	□□□□□ -1.49
MSI2-215	ENST00000582453	PLAUR	Q03405	335 aa		5.74	□□□□□ -1.49
MSI2-215	ENST00000582453	KCNA1	Q09470	495 aa		5.74	□□□□□ -1.49
MSI2-215	ENST00000582453	KCNMA1	Q12791	1236 aa		5.74	□□□□□ -1.49
MSI2-215	ENST00000582453	XKR5	Q6UX68	686 aa		5.74	□□□□□ -1.49
MSI2-215	ENST00000582453	LINC00114	Q6XXX2	140 aa		5.74	□□□□□ -1.49
MSI2-215	ENST00000582453	TTC16	Q8NEE8	873 aa		5.74	□□□□□ -1.49
MSI2-215	ENST00000582453	PRDM6	Q9NQX0	595 aa		5.74	□□□□□ -1.49
MSI2-215	ENST00000582453	POLI	Q9UNA4	740 aa		5.74	□□□□□ -1.49
MSI2-215	ENST00000582453	STARD13	Q9Y3M8	1113 aa		5.74	□□□□□ -1.49
MSI2-215	ENST00000582453	ZBTB42	B2RXF5	422 aa		5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	PATL2	C9JE40	543 aa	Known RBP	5.73	□□□□□ -1.49
MSI2-215	ENST00000582453		M0R082	166 aa		5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	GNB5	O14775	395 aa		5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	ALB	P02768	609 aa		5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	ARHGAP4	P98171	946 aa		5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	EHHADH	Q08426	723 aa		5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	ECM1	Q16610	540 aa		5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	TTC39B	Q5VTQ0	682 aa	Predicted RBP	5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	C20orf204	Q6ZNR8	217 aa		5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	ZNF438	Q7Z4V0	828 aa		5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	FAM35A	Q86V20	835 aa		5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	MICALL1	Q8N3F8	863 aa		5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	OR13H1	Q8NG92	308 aa		5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	ZNF417	Q8TAU3	575 aa		5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	ZNF587	Q96SQ5	575 aa	Predicted RBP	5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	ELP3	Q9H9T3	547 aa		5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	ABI2	Q9NYB9	513 aa	Predicted RBP	5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	NAGPA	Q9UK23	515 aa		5.73	□□□□□ -1.49
MSI2-215	ENST00000582453	SOWAHD	A6NJG2	315 aa		5.72	□□□□□ -1.49
MSI2-215	ENST00000582453	IRS1	P35568	1242 aa		5.72	□□□□□ -1.49
MSI2-215	ENST00000582453	C8orf34	Q49A92	452 aa		5.72	□□□□□ -1.49
MSI2-215	ENST00000582453	PSAPL1	Q6NUJ1	521 aa		5.72	□□□□□ -1.49
MSI2-215	ENST00000582453	GGNBP2	Q9H3C7	697 aa		5.72	□□□□□ -1.49
MSI2-215	ENST00000582453	CCDC87	Q9NVE4	849 aa		5.72	□□□□□ -1.49
MSI2-215	ENST00000582453	FRRS1L	Q9P0K9	344 aa		5.72	□□□□□ -1.49
MSI2-215	ENST00000582453	MYO15B	Q96JP2	1530 aa		5.72	□□□□□ -1.49
MSI2-215	ENST00000582453	LOC102724428	A0A0B4J2F2	783 aa		5.71	□□□□□ -1.5
MSI2-215	ENST00000582453	NDUFB5	O43674	189 aa		5.71	□□□□□ -1.5
MSI2-215	ENST00000582453	LILRB5	O75023	590 aa		5.71	□□□□□ -1.5
MSI2-215	ENST00000582453	RGS9	O75916	674 aa	Predicted RBP	5.71	□□□□□ -1.5
MSI2-215	ENST00000582453	PDIA4	P13667	645 aa	Known RBP	5.71	□□□□□ -1.5
MSI2-215	ENST00000582453	CPB1	P15086	417 aa		5.71	□□□□□ -1.5
MSI2-215	ENST00000582453	SIK1	P57059	783 aa		5.71	□□□□□ -1.5
MSI2-215	ENST00000582453	MLLT1	Q03111	559 aa	Predicted RBP	5.71	□□□□□ -1.5
MSI2-215	ENST00000582453	GJD3	Q8N144	294 aa		5.71	□□□□□ -1.5
MSI2-215	ENST00000582453	NOP53	Q9NZM5	478 aa	Known RBP	5.71	□□□□□ -1.5
MSI2-215	ENST00000582453	TMEM63C	Q9P1W3	806 aa		5.71	□□□□□ -1.5
MSI2-215	ENST00000582453	BRPF3	Q9ULD4	1205 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms