RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 NBPF26B4DH59 902 aa11.71□□□□□ -0.53
CDK5RAP3-224ENST00000582275 ZNF157P51786 506 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-224ENST00000582275 HLFQ16534 295 aa11.71□□□□□ -0.53
CDK5RAP3-224ENST00000582275 NBPF10Q6P3W6 841 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-224ENST00000582275 USP48Q86UV5 1035 aa11.71□□□□□ -0.53
CDK5RAP3-224ENST00000582275 RTF1Q92541 710 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-224ENST00000582275 CNOT7Q9UIV1 285 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-224ENST00000582275 HPS5Q9UPZ3 1129 aa11.71□□□□□ -0.53
CDK5RAP3-224ENST00000582275 U2SURPO15042 1029 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-224ENST00000582275 HIRAP54198 1017 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-224ENST00000582275 KIAA2012Q0VF49 1180 aa11.7□□□□□ -0.54
CDK5RAP3-224ENST00000582275 DPP8Q6V1X1 898 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-224ENST00000582275 KIF6Q6ZMV9 814 aa11.7□□□□□ -0.54
CDK5RAP3-224ENST00000582275 KRT26Q7Z3Y9 468 aa11.7□□□□□ -0.54
CDK5RAP3-224ENST00000582275 DPF2Q92785 391 aa11.7□□□□□ -0.54
CDK5RAP3-224ENST00000582275 NLRP3Q96P20 1036 aa11.7□□□□□ -0.54
CDK5RAP3-224ENST00000582275 MAP3K15Q6ZN16 1313 aa11.69□□□□□ -0.54
CDK5RAP3-224ENST00000582275 PRAMEF22A3QJZ6 481 aa11.69□□□□□ -0.54
CDK5RAP3-224ENST00000582275 TCERG1O14776 1098 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-224ENST00000582275 BBOX1O75936 387 aa11.69□□□□□ -0.54
CDK5RAP3-224ENST00000582275 SLC10A3P09131 477 aa11.69□□□□□ -0.54
CDK5RAP3-224ENST00000582275 PPP1R42Q7Z4L9 355 aa11.69□□□□□ -0.54
CDK5RAP3-224ENST00000582275 TRPM4Q8TD43 1214 aa11.69□□□□□ -0.54
CDK5RAP3-224ENST00000582275 DCPSQ96C86 337 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-224ENST00000582275 HDAC9Q9UKV0 1011 aa11.69□□□□□ -0.54
CDK5RAP3-224ENST00000582275 RAD17O75943 681 aa11.68□□□□□ -0.54
CDK5RAP3-224ENST00000582275 PARP10Q53GL7 1025 aa11.68□□□□□ -0.54
CDK5RAP3-224ENST00000582275 MICALL2Q8IY33 904 aa11.68□□□□□ -0.54
CDK5RAP3-224ENST00000582275 MPNDQ8N594 471 aa11.68□□□□□ -0.54
CDK5RAP3-224ENST00000582275 HSPA5P11021 654 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-224ENST00000582275 RPS12P25398 132 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-224ENST00000582275 HABP4Q5JVS0 413 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-224ENST00000582275 TMC4Q7Z404 712 aa11.67□□□□□ -0.54
CDK5RAP3-224ENST00000582275 SP8Q8IXZ3 490 aa11.67□□□□□ -0.54
CDK5RAP3-224ENST00000582275 CSRNP1Q96S65 589 aa11.67□□□□□ -0.54
CDK5RAP3-224ENST00000582275 HTATSF1O43719 755 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-224ENST00000582275 FKBP1BP68106 108 aa11.66□□□□□ -0.54
CDK5RAP3-224ENST00000582275 NOM1Q5C9Z4 860 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-224ENST00000582275 SUSD4Q5VX71 490 aa11.66□□□□□ -0.54
CDK5RAP3-224ENST00000582275 FBXO46Q6PJ61 603 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-224ENST00000582275 SULF1Q8IWU6 871 aa11.66□□□□□ -0.54
CDK5RAP3-224ENST00000582275 NUP98P52948 1817 aa11.65□□□□□ -0.54
CDK5RAP3-224ENST00000582275 NTSR2O95665 410 aa11.65□□□□□ -0.54
CDK5RAP3-224ENST00000582275 GPTP24298 496 aa11.65□□□□□ -0.54
CDK5RAP3-224ENST00000582275 PRKAR2BP31323 418 aa11.65□□□□□ -0.54
CDK5RAP3-224ENST00000582275 SLC10A5Q5PT55 438 aa11.65□□□□□ -0.54
CDK5RAP3-224ENST00000582275 ZNF34Q8IZ26 560 aa11.65□□□□□ -0.54
CDK5RAP3-224ENST00000582275 NGEFQ8N5V2 710 aa11.65□□□□□ -0.54
CDK5RAP3-224ENST00000582275 PNISRQ8TF01 805 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-224ENST00000582275 ABCC4O15439 1325 aa11.64□□□□□ -0.55
CDK5RAP3-224ENST00000582275 UBN2Q6ZU65 1347 aa11.64□□□□□ -0.55
CDK5RAP3-224ENST00000582275 TAF7Q15545 349 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-224ENST00000582275 GIGYF2Q6Y7W6 1299 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-224ENST00000582275 SAMD7Q7Z3H4 446 aa11.64□□□□□ -0.55
CDK5RAP3-224ENST00000582275 UTP14AQ9BVJ6 771 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-224ENST00000582275 NUDCQ9Y266 331 aa11.64□□□□□ -0.55
CDK5RAP3-224ENST00000582275 COL3A1P02461 1466 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-224ENST00000582275 PRR29P0C7W0 189 aa11.63□□□□□ -0.55
CDK5RAP3-224ENST00000582275 TBC1D10BQ4KMP7 808 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-224ENST00000582275 DDX46Q7L014 1031 aaKnown RBP11.63□□□□□ -0.55
CDK5RAP3-224ENST00000582275 ZNF296Q8WUU4 475 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-224ENST00000582275 PHACTR3Q96KR7 559 aa11.63□□□□□ -0.55
CDK5RAP3-224ENST00000582275 CFAP53Q96M91 514 aa11.63□□□□□ -0.55
CDK5RAP3-224ENST00000582275 RSPH6AQ9H0K4 717 aa11.63□□□□□ -0.55
CDK5RAP3-224ENST00000582275 ZBTB3Q9H5J0 574 aa11.63□□□□□ -0.55
CDK5RAP3-224ENST00000582275 ERBB4Q15303 1308 aa11.62□□□□□ -0.55
CDK5RAP3-224ENST00000582275 LAMB4A4D0S4 1761 aa11.62□□□□□ -0.55
CDK5RAP3-224ENST00000582275 POLR2AP24928 1970 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-224ENST00000582275 YDJCA8MPS7 323 aa11.62□□□□□ -0.55
CDK5RAP3-224ENST00000582275 ADM5C9JUS6 153 aa11.62□□□□□ -0.55
CDK5RAP3-224ENST00000582275 PSMD14O00487 310 aa11.62□□□□□ -0.55
CDK5RAP3-224ENST00000582275 CC2D1BQ5T0F9 858 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-224ENST00000582275 INTS3Q68E01 1043 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-224ENST00000582275 C3orf67Q6ZVT6 689 aa11.62□□□□□ -0.55
CDK5RAP3-224ENST00000582275 MCM10Q7L590 875 aa11.62□□□□□ -0.55
CDK5RAP3-224ENST00000582275 RASAL3Q86YV0 1011 aa11.62□□□□□ -0.55
CDK5RAP3-224ENST00000582275 RRP7AQ9Y3A4 280 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-224ENST00000582275 SHTN1A0MZ66 631 aa11.61□□□□□ -0.55
CDK5RAP3-224ENST00000582275 GRAPQ13588 217 aa11.61□□□□□ -0.55
CDK5RAP3-224ENST00000582275 WASHC4Q2M389 1173 aa11.61□□□□□ -0.55
CDK5RAP3-224ENST00000582275 KIF4BQ2VIQ3 1234 aa11.61□□□□□ -0.55
CDK5RAP3-224ENST00000582275 TTLL7Q6ZT98 887 aa11.61□□□□□ -0.55
CDK5RAP3-224ENST00000582275 GRAPLQ8TC17 118 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-224ENST00000582275 NECTIN2Q92692 538 aa11.61□□□□□ -0.55
CDK5RAP3-224ENST00000582275 GGA3Q9NZ52 723 aa11.61□□□□□ -0.55
CDK5RAP3-224ENST00000582275 CLSPNQ9HAW4 1339 aa11.6□□□□□ -0.55
CDK5RAP3-224ENST00000582275 GPR25O00155 361 aa11.6□□□□□ -0.55
CDK5RAP3-224ENST00000582275 MYL6BP14649 208 aa11.6□□□□□ -0.55
CDK5RAP3-224ENST00000582275 FXR2P51116 673 aaKnown RBP eCLIP11.6□□□□□ -0.55
CDK5RAP3-224ENST00000582275 HSP90AB3PQ58FF7 597 aa11.6□□□□□ -0.55
CDK5RAP3-224ENST00000582275 RBM26Q5T8P6 1007 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-224ENST00000582275 SLC51AQ86UW1 340 aa11.6□□□□□ -0.55
CDK5RAP3-224ENST00000582275 CDCA5Q96FF9 252 aa11.6□□□□□ -0.55
CDK5RAP3-224ENST00000582275 EYA3Q99504 573 aa11.6□□□□□ -0.55
CDK5RAP3-224ENST00000582275 PER1O15534 1290 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-224ENST00000582275 FKTNO75072 461 aa11.59□□□□□ -0.55
CDK5RAP3-224ENST00000582275 TBC1D8O95759 1140 aa11.59□□□□□ -0.55
CDK5RAP3-224ENST00000582275 SREBF2Q12772 1141 aa11.59□□□□□ -0.55
CDK5RAP3-224ENST00000582275 DLK2Q6UY11 383 aa11.59□□□□□ -0.55
CDK5RAP3-224ENST00000582275 PAPPA2Q9BXP8 1791 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms