RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 SCAND2PQ9GZW5 306 aaPredicted RBP16.24■□□□□ 0.19
RNF43-205ENST00000581868 SNRKQ9NRH2 765 aa16.24■□□□□ 0.19
RNF43-205ENST00000581868 CCDC9Q9Y3X0 531 aaKnown RBP16.24■□□□□ 0.19
RNF43-205ENST00000581868 NEURL1BA8MQ27 555 aa16.23■□□□□ 0.19
RNF43-205ENST00000581868 GOLGA6L6A8MZA4 724 aa16.23■□□□□ 0.19
RNF43-205ENST00000581868 TAF5LO75529 589 aa16.23■□□□□ 0.19
RNF43-205ENST00000581868 ANO6Q4KMQ2 910 aa16.23■□□□□ 0.19
RNF43-205ENST00000581868 COPS6Q7L5N1 327 aa16.23■□□□□ 0.19
RNF43-205ENST00000581868 ELP1O95163 1332 aa16.23■□□□□ 0.19
RNF43-205ENST00000581868 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
RNF43-205ENST00000581868 PTGS1P23219 599 aa16.23■□□□□ 0.19
RNF43-205ENST00000581868 GCKRQ14397 625 aa16.23■□□□□ 0.19
RNF43-205ENST00000581868 CCDC129Q6ZRS4 1044 aa16.23■□□□□ 0.19
RNF43-205ENST00000581868 LEO1Q8WVC0 666 aaPredicted RBP16.23■□□□□ 0.19
RNF43-205ENST00000581868 DDX11Q96FC9 970 aa16.23■□□□□ 0.19
RNF43-205ENST00000581868 MED23Q9ULK4 1368 aa16.23■□□□□ 0.19
RNF43-205ENST00000581868 ADGRL3Q9HAR2 1447 aa16.22■□□□□ 0.19
RNF43-205ENST00000581868 DRC7Q8IY82 874 aa16.22■□□□□ 0.19
RNF43-205ENST00000581868 BICD2Q8TD16 824 aa16.22■□□□□ 0.19
RNF43-205ENST00000581868 DNAJC2Q99543 621 aaKnown RBP16.22■□□□□ 0.19
RNF43-205ENST00000581868 NCAPD2Q15021 1401 aa16.22■□□□□ 0.19
RNF43-205ENST00000581868 PDIA4P13667 645 aaKnown RBP16.22■□□□□ 0.19
RNF43-205ENST00000581868 CBX8Q9HC52 389 aa16.22■□□□□ 0.19
RNF43-205ENST00000581868 HMG20BQ9P0W2 317 aa16.22■□□□□ 0.19
RNF43-205ENST00000581868 TPM3P06753 285 aa16.21■□□□□ 0.19
RNF43-205ENST00000581868 TFCP2Q12800 502 aa16.21■□□□□ 0.19
RNF43-205ENST00000581868 ZNF790Q6PG37 636 aa16.21■□□□□ 0.19
RNF43-205ENST00000581868 SEC62Q99442 399 aaKnown RBP16.21■□□□□ 0.19
RNF43-205ENST00000581868 LRRC2Q9BYS8 371 aa16.21■□□□□ 0.19
RNF43-205ENST00000581868 DBNLQ9UJU6 430 aaKnown RBP16.21■□□□□ 0.19
RNF43-205ENST00000581868 NR1I2O75469 434 aa16.21■□□□□ 0.19
RNF43-205ENST00000581868 ZNF710Q8N1W2 664 aa16.21■□□□□ 0.19
RNF43-205ENST00000581868 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
RNF43-205ENST00000581868 NEK1Q96PY6 1258 aa16.21■□□□□ 0.19
RNF43-205ENST00000581868 KIF3AQ9Y496 699 aa16.21■□□□□ 0.19
RNF43-205ENST00000581868 NPHP3Q7Z494 1330 aa16.2■□□□□ 0.18
RNF43-205ENST00000581868 FOSBP53539 338 aa16.2■□□□□ 0.18
RNF43-205ENST00000581868 CEBPZQ03701 1054 aaKnown RBP16.2■□□□□ 0.18
RNF43-205ENST00000581868 Q6ZUG5 572 aa16.2■□□□□ 0.18
RNF43-205ENST00000581868 NFATC2IPQ8NCF5 419 aa16.2■□□□□ 0.18
RNF43-205ENST00000581868 BRF1Q92994 677 aa16.2■□□□□ 0.18
RNF43-205ENST00000581868 ALDH8A1Q9H2A2 487 aaPredicted RBP16.2■□□□□ 0.18
RNF43-205ENST00000581868 H3BQV1 296 aa16.2■□□□□ 0.18
RNF43-205ENST00000581868 IFFO2Q5TF58 517 aa16.2■□□□□ 0.18
RNF43-205ENST00000581868 PGBD1Q96JS3 809 aa16.2■□□□□ 0.18
RNF43-205ENST00000581868 COL15A1P39059 1388 aa16.2■□□□□ 0.18
RNF43-205ENST00000581868 FGD1P98174 961 aa16.19■□□□□ 0.18
RNF43-205ENST00000581868 TNNI3KQ59H18 835 aa16.19■□□□□ 0.18
RNF43-205ENST00000581868 CCDC186Q7Z3E2 898 aa16.19■□□□□ 0.18
RNF43-205ENST00000581868 GTF3C6Q969F1 213 aa16.19■□□□□ 0.18
RNF43-205ENST00000581868 METTL22Q9BUU2 404 aaPredicted RBP16.19■□□□□ 0.18
RNF43-205ENST00000581868 TRIM5Q9C035 493 aa16.19■□□□□ 0.18
RNF43-205ENST00000581868 DDX19AQ9NUU7 478 aaKnown RBP16.19■□□□□ 0.18
RNF43-205ENST00000581868 FPGT-TNNI3KV9GXZ4 949 aa16.19■□□□□ 0.18
RNF43-205ENST00000581868 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.19■□□□□ 0.18
RNF43-205ENST00000581868 ZC3H6P61129 1189 aaKnown RBP16.19■□□□□ 0.18
RNF43-205ENST00000581868 CHAF1AQ13111 956 aaPredicted RBP16.19■□□□□ 0.18
RNF43-205ENST00000581868 KRT32Q14532 448 aa16.19■□□□□ 0.18
RNF43-205ENST00000581868 TSGA10IPQ3SY00 556 aa16.19■□□□□ 0.18
RNF43-205ENST00000581868 UBE3BQ7Z3V4 1068 aa16.19■□□□□ 0.18
RNF43-205ENST00000581868 ANKLE2Q86XL3 938 aa16.19■□□□□ 0.18
RNF43-205ENST00000581868 CLSTN2Q9H4D0 955 aa16.19■□□□□ 0.18
RNF43-205ENST00000581868 NRBP1Q9UHY1 535 aa16.19■□□□□ 0.18
RNF43-205ENST00000581868 ATP5JP18859 108 aa16.18■□□□□ 0.18
RNF43-205ENST00000581868 GTF2F1P35269 517 aaKnown RBP eCLIP16.18■□□□□ 0.185e-8■■■■□ 25.1
RNF43-205ENST00000581868 ANKRD13DQ6ZTN6 518 aa16.18■□□□□ 0.18
RNF43-205ENST00000581868 DDX46Q7L014 1031 aaKnown RBP16.18■□□□□ 0.18
RNF43-205ENST00000581868 DNAJC25Q9H1X3 360 aa16.18■□□□□ 0.18
RNF43-205ENST00000581868 ATP5J2-PTCD1G3V325 749 aa16.18■□□□□ 0.18
RNF43-205ENST00000581868 PTCD1O75127 700 aaKnown RBP16.18■□□□□ 0.18
RNF43-205ENST00000581868 LRMPQ12912 555 aa16.18■□□□□ 0.18
RNF43-205ENST00000581868 DBNDD2Q9BQY9 259 aa16.18■□□□□ 0.18
RNF43-205ENST00000581868 RIOK3O14730 519 aaKnown RBP16.17■□□□□ 0.18
RNF43-205ENST00000581868 CYP21A2P08686 494 aa16.17■□□□□ 0.18
RNF43-205ENST00000581868 PTPN12Q05209 780 aaKnown RBP16.17■□□□□ 0.18
RNF43-205ENST00000581868 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
RNF43-205ENST00000581868 ZNF496Q96IT1 587 aaPredicted RBP16.17■□□□□ 0.18
RNF43-205ENST00000581868 ZNF165P49910 485 aa16.17■□□□□ 0.18
RNF43-205ENST00000581868 RAPGEF4Q8WZA2 1011 aa16.17■□□□□ 0.18
RNF43-205ENST00000581868 CCDC94Q9BW85 323 aaPredicted RBP16.17■□□□□ 0.18
RNF43-205ENST00000581868 SLC52A2Q9HAB3 445 aa16.17■□□□□ 0.18
RNF43-205ENST00000581868 BCL2L12Q9HB09 334 aa16.17■□□□□ 0.18
RNF43-205ENST00000581868 COPRSQ9NQ92 184 aa16.17■□□□□ 0.18
RNF43-205ENST00000581868 NLRP2Q9NX02 1062 aa16.17■□□□□ 0.18
RNF43-205ENST00000581868 USP16Q9Y5T5 823 aa16.17■□□□□ 0.18
RNF43-205ENST00000581868 OVOS2A0A0G2JMS6 1433 aa16.17■□□□□ 0.18
RNF43-205ENST00000581868 PPFIA3O75145 1194 aa16.16■□□□□ 0.18
RNF43-205ENST00000581868 RESTQ13127 1097 aa16.16■□□□□ 0.18
RNF43-205ENST00000581868 FER1L4A9Z1Z3 1794 aa16.16■□□□□ 0.18
RNF43-205ENST00000581868 RFX5P48382 616 aaPredicted RBP16.16■□□□□ 0.18
RNF43-205ENST00000581868 SLFNL1Q499Z3 407 aa16.16■□□□□ 0.18
RNF43-205ENST00000581868 PRDM10Q9NQV6 1147 aa16.16■□□□□ 0.18
RNF43-205ENST00000581868 U3KPZ7 1027 aaPredicted RBP16.16■□□□□ 0.18
RNF43-205ENST00000581868 CHD2O14647 1828 aaKnown RBP16.16■□□□□ 0.18
RNF43-205ENST00000581868 JCADQ9P266 1359 aa16.16■□□□□ 0.18
RNF43-205ENST00000581868 ZNF75DP51815 510 aa16.15■□□□□ 0.18
RNF43-205ENST00000581868 MCMDC2Q4G0Z9 681 aa16.15■□□□□ 0.18
RNF43-205ENST00000581868 ZNF609O15014 1411 aa16.15■□□□□ 0.18
RNF43-205ENST00000581868 SCRN1Q12765 414 aa16.15■□□□□ 0.18
RNF43-205ENST00000581868 NAP1L2Q9ULW6 460 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms