RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 UTP14AQ9BVJ6 771 aaKnown RBP13.2□□□□□ -0.3
CALCOCO2-227ENST00000575560 GLIS2Q9BZE0 524 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO2-227ENST00000575560 KDM3BQ7LBC6 1761 aa13.2□□□□□ -0.3
CALCOCO2-227ENST00000575560 ABCC4O15439 1325 aa13.19□□□□□ -0.3
CALCOCO2-227ENST00000575560 CDHR2Q9BYE9 1310 aa13.19□□□□□ -0.3
CALCOCO2-227ENST00000575560 TNRC18O15417 2968 aaPredicted RBP13.19□□□□□ -0.3
CALCOCO2-227ENST00000575560 KIAA2012Q0VF49 1180 aa13.19□□□□□ -0.3
CALCOCO2-227ENST00000575560 CIAPIN1Q6FI81 312 aa13.19□□□□□ -0.3
CALCOCO2-227ENST00000575560 NEFMP07197 916 aa13.18□□□□□ -0.3
CALCOCO2-227ENST00000575560 TNIP1Q15025 636 aa13.18□□□□□ -0.3
CALCOCO2-227ENST00000575560 NFE2L2Q16236 605 aa13.18□□□□□ -0.3
CALCOCO2-227ENST00000575560 DPP8Q6V1X1 898 aaPredicted RBP13.18□□□□□ -0.3
CALCOCO2-227ENST00000575560 CDC37L1Q7L3B6 337 aa13.18□□□□□ -0.3
CALCOCO2-227ENST00000575560 MPNDQ8N594 471 aa13.18□□□□□ -0.3
CALCOCO2-227ENST00000575560 MCOLN1Q9GZU1 580 aa13.18□□□□□ -0.3
CALCOCO2-227ENST00000575560 RAD17O75943 681 aa13.17□□□□□ -0.3
CALCOCO2-227ENST00000575560 CNOT7Q9UIV1 285 aaKnown RBP13.17□□□□□ -0.3
CALCOCO2-227ENST00000575560 YDJCA8MPS7 323 aa13.16□□□□□ -0.3
CALCOCO2-227ENST00000575560 PROSER3Q2NL68 480 aa13.16□□□□□ -0.3
CALCOCO2-227ENST00000575560 TRPM4Q8TD43 1214 aa13.16□□□□□ -0.3
CALCOCO2-227ENST00000575560 BCL2L13Q9BXK5 485 aa13.16□□□□□ -0.3
CALCOCO2-227ENST00000575560 SHTN1A0MZ66 631 aa13.15□□□□□ -0.3
CALCOCO2-227ENST00000575560 HCLS1P14317 486 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO2-227ENST00000575560 EIF2S2P20042 333 aaKnown RBP13.15□□□□□ -0.3
CALCOCO2-227ENST00000575560 HOXD11P31277 338 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO2-227ENST00000575560 NLRP10Q86W26 655 aa13.15□□□□□ -0.3
CALCOCO2-227ENST00000575560 ZIC5Q96T25 663 aa13.15□□□□□ -0.3
CALCOCO2-227ENST00000575560 DLG5Q8TDM6 1919 aa13.15□□□□□ -0.3
CALCOCO2-227ENST00000575560 ANXA1P04083 346 aa13.14□□□□□ -0.31
CALCOCO2-227ENST00000575560 NOGQ13253 232 aa13.14□□□□□ -0.31
CALCOCO2-227ENST00000575560 GRAPQ13588 217 aa13.14□□□□□ -0.31
CALCOCO2-227ENST00000575560 DDX46Q7L014 1031 aaKnown RBP13.14□□□□□ -0.31
CALCOCO2-227ENST00000575560 COPS6Q7L5N1 327 aa13.14□□□□□ -0.31
CALCOCO2-227ENST00000575560 GRAPLQ8TC17 118 aaPredicted RBP13.14□□□□□ -0.31
CALCOCO2-227ENST00000575560 DPF2Q92785 391 aa13.14□□□□□ -0.31
CALCOCO2-227ENST00000575560 ZNF408Q9H9D4 720 aa13.14□□□□□ -0.31
CALCOCO2-227ENST00000575560 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
CALCOCO2-227ENST00000575560 BABAM1Q9NWV8 329 aa13.14□□□□□ -0.31
CALCOCO2-227ENST00000575560 TSPYL4Q9UJ04 414 aa13.14□□□□□ -0.31
CALCOCO2-227ENST00000575560 H7C1D1 291 aa13.13□□□□□ -0.31
CALCOCO2-227ENST00000575560 TCIRG1Q13488 830 aa13.13□□□□□ -0.31
CALCOCO2-227ENST00000575560 DGKZQ13574 1117 aa13.13□□□□□ -0.31
CALCOCO2-227ENST00000575560 HSP90AB3PQ58FF7 597 aa13.13□□□□□ -0.31
CALCOCO2-227ENST00000575560 DLK2Q6UY11 383 aa13.13□□□□□ -0.31
CALCOCO2-227ENST00000575560 TMC4Q7Z404 712 aa13.13□□□□□ -0.31
CALCOCO2-227ENST00000575560 USP48Q86UV5 1035 aa13.13□□□□□ -0.31
CALCOCO2-227ENST00000575560 MICALL2Q8IY33 904 aa13.13□□□□□ -0.31
CALCOCO2-227ENST00000575560 PNNQ9H307 717 aaKnown RBP13.13□□□□□ -0.31
CALCOCO2-227ENST00000575560 CASP8AP2Q9UKL3 1982 aa13.12□□□□□ -0.31
CALCOCO2-227ENST00000575560 FAM155AB1AL88 458 aaPredicted RBP13.12□□□□□ -0.31
CALCOCO2-227ENST00000575560 HUNKP57058 714 aa13.12□□□□□ -0.31
CALCOCO2-227ENST00000575560 TRMT112Q9UI30 125 aaKnown RBP13.12□□□□□ -0.31
CALCOCO2-227ENST00000575560 ZBTB12Q9Y330 459 aaPredicted RBP13.12□□□□□ -0.31
CALCOCO2-227ENST00000575560 SH3TC1Q8TE82 1336 aa13.12□□□□□ -0.31
CALCOCO2-227ENST00000575560 PSMD14O00487 310 aa13.11□□□□□ -0.31
CALCOCO2-227ENST00000575560 AIMP1Q12904 312 aaKnown RBP13.11□□□□□ -0.31
CALCOCO2-227ENST00000575560 WASHC4Q2M389 1173 aa13.11□□□□□ -0.31
CALCOCO2-227ENST00000575560 SAMD7Q7Z3H4 446 aa13.11□□□□□ -0.31
CALCOCO2-227ENST00000575560 XAGE3Q8WTP9 111 aa13.11□□□□□ -0.31
CALCOCO2-227ENST00000575560 CFAP44Q96MT7 982 aa13.11□□□□□ -0.31
CALCOCO2-227ENST00000575560 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
CALCOCO2-227ENST00000575560 ANKRD36CQ5JPF3 1778 aa13.11□□□□□ -0.31
CALCOCO2-227ENST00000575560 EGFRP00533 1210 aa13.1□□□□□ -0.31
CALCOCO2-227ENST00000575560 RIPK4P57078 832 aa13.1□□□□□ -0.31
CALCOCO2-227ENST00000575560 RGMBQ6NW40 437 aa13.1□□□□□ -0.31
CALCOCO2-227ENST00000575560 KRT26Q7Z3Y9 468 aa13.1□□□□□ -0.31
CALCOCO2-227ENST00000575560 DUOX1Q9NRD9 1551 aa13.1□□□□□ -0.31
CALCOCO2-227ENST00000575560 MAPK8IP3Q9UPT6 1336 aa13.1□□□□□ -0.31
CALCOCO2-227ENST00000575560 RPS12P25398 132 aaKnown RBP13.09□□□□□ -0.31
CALCOCO2-227ENST00000575560 SF3B3Q15393 1217 aaKnown RBP13.09□□□□□ -0.31
CALCOCO2-227ENST00000575560 TBC1D10BQ4KMP7 808 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO2-227ENST00000575560 C2orf69Q8N8R5 385 aa13.09□□□□□ -0.31
CALCOCO2-227ENST00000575560 NECTIN2Q92692 538 aa13.09□□□□□ -0.31
CALCOCO2-227ENST00000575560 CCDC102AQ96A19 550 aa13.09□□□□□ -0.31
CALCOCO2-227ENST00000575560 GBA2Q9HCG7 927 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO2-227ENST00000575560 KCNQ5Q9NR82 932 aa13.09□□□□□ -0.31
CALCOCO2-227ENST00000575560 SAGE1Q9NXZ1 904 aa13.09□□□□□ -0.31
CALCOCO2-227ENST00000575560 POLLQ9UGP5 575 aa13.09□□□□□ -0.31
CALCOCO2-227ENST00000575560 LAMB2P55268 1798 aa13.09□□□□□ -0.31
CALCOCO2-227ENST00000575560 KIF23Q02241 960 aaPredicted RBP13.08□□□□□ -0.32
CALCOCO2-227ENST00000575560 CELF1Q92879 486 aaKnown RBP13.08□□□□□ -0.32
CALCOCO2-227ENST00000575560 DBNDD1Q9H9R9 158 aa13.08□□□□□ -0.32
CALCOCO2-227ENST00000575560 NSFL1CQ9UNZ2 370 aaKnown RBP13.08□□□□□ -0.32
CALCOCO2-227ENST00000575560 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
CALCOCO2-227ENST00000575560 TMPOP42166 694 aaKnown RBP13.07□□□□□ -0.32
CALCOCO2-227ENST00000575560 GPSM2P81274 684 aa13.07□□□□□ -0.32
CALCOCO2-227ENST00000575560 DCPSQ96C86 337 aaKnown RBP13.07□□□□□ -0.32
CALCOCO2-227ENST00000575560 FAM89AQ96GI7 184 aa13.07□□□□□ -0.32
CALCOCO2-227ENST00000575560 ISCA1Q9BUE6 129 aa13.07□□□□□ -0.32
CALCOCO2-227ENST00000575560 RNF186Q9NXI6 227 aa13.07□□□□□ -0.32
CALCOCO2-227ENST00000575560 TAF1P21675 1872 aa13.07□□□□□ -0.32
CALCOCO2-227ENST00000575560 RTL9Q8NET4 1388 aa13.07□□□□□ -0.32
CALCOCO2-227ENST00000575560 LRRC37AA6NMS7 1700 aa13.06□□□□□ -0.32
CALCOCO2-227ENST00000575560 ADM5C9JUS6 153 aa13.06□□□□□ -0.32
CALCOCO2-227ENST00000575560 C6orf229H3BNL8 230 aa13.06□□□□□ -0.32
CALCOCO2-227ENST00000575560 CHL1O00533 1208 aa13.06□□□□□ -0.32
CALCOCO2-227ENST00000575560 ECE2O60344 883 aa13.06□□□□□ -0.32
CALCOCO2-227ENST00000575560 VIL1P09327 827 aaKnown RBP13.06□□□□□ -0.32
CALCOCO2-227ENST00000575560 ZNF157P51786 506 aaPredicted RBP13.06□□□□□ -0.32
CALCOCO2-227ENST00000575560 KRT24Q2M2I5 525 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms