RNA–Protein interactions for RNA: ENST00000569709.5

RNPS1-225, Transcript of RNA binding protein with serine rich domain 1, human

TSL 4

Gene RNPS1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNPS1-225	ENST00000569709	SUPT20H	Q8NEM7	779 aa		13.96	□□□□□ -0.17
RNPS1-225	ENST00000569709	ABHD8	Q96I13	439 aa		13.96	□□□□□ -0.17
RNPS1-225	ENST00000569709	GPR101	Q96P66	508 aa	Predicted RBP	13.96	□□□□□ -0.17
RNPS1-225	ENST00000569709	BEGAIN	Q9BUH8	593 aa		13.96	□□□□□ -0.17
RNPS1-225	ENST00000569709	ZNRF3	Q9ULT6	936 aa		13.96	□□□□□ -0.17
RNPS1-225	ENST00000569709	TLL2	Q9Y6L7	1015 aa		13.96	□□□□□ -0.17
RNPS1-225	ENST00000569709	GMPS	P49915	693 aa	Predicted RBP	13.95	□□□□□ -0.18
RNPS1-225	ENST00000569709	DPP8	Q6V1X1	898 aa	Predicted RBP	13.95	□□□□□ -0.18
RNPS1-225	ENST00000569709	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.95	□□□□□ -0.18
RNPS1-225	ENST00000569709	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.95	□□□□□ -0.18
RNPS1-225	ENST00000569709	LRRC37A	A6NMS7	1700 aa		13.94	□□□□□ -0.18
RNPS1-225	ENST00000569709	BBOX1	O75936	387 aa		13.94	□□□□□ -0.18
RNPS1-225	ENST00000569709	HCLS1	P14317	486 aa	Predicted RBP	13.94	□□□□□ -0.18
RNPS1-225	ENST00000569709	RIPK4	P57078	832 aa		13.94	□□□□□ -0.18
RNPS1-225	ENST00000569709	AIMP1	Q12904	312 aa	Known RBP	13.94	□□□□□ -0.18
RNPS1-225	ENST00000569709	HSP90AB3P	Q58FF7	597 aa		13.94	□□□□□ -0.18
RNPS1-225	ENST00000569709	NLRP10	Q86W26	655 aa		13.94	□□□□□ -0.18
RNPS1-225	ENST00000569709	MPND	Q8N594	471 aa		13.94	□□□□□ -0.18
RNPS1-225	ENST00000569709	NECTIN2	Q92692	538 aa		13.94	□□□□□ -0.18
RNPS1-225	ENST00000569709	DDX60	Q8IY21	1712 aa	Known RBP	13.93	□□□□□ -0.18
RNPS1-225	ENST00000569709	RAD17	O75943	681 aa		13.93	□□□□□ -0.18
RNPS1-225	ENST00000569709	CELF2	O95319	508 aa	Known RBP	13.93	□□□□□ -0.18
RNPS1-225	ENST00000569709	KIAA2012	Q0VF49	1180 aa		13.93	□□□□□ -0.18
RNPS1-225	ENST00000569709	CIAPIN1	Q6FI81	312 aa		13.93	□□□□□ -0.18
RNPS1-225	ENST00000569709	DDX46	Q7L014	1031 aa	Known RBP	13.93	□□□□□ -0.18
RNPS1-225	ENST00000569709	COPS6	Q7L5N1	327 aa		13.93	□□□□□ -0.18
RNPS1-225	ENST00000569709	SP8	Q8IXZ3	490 aa		13.93	□□□□□ -0.18
RNPS1-225	ENST00000569709	XAGE3	Q8WTP9	111 aa		13.93	□□□□□ -0.18
RNPS1-225	ENST00000569709	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.93	□□□□□ -0.18
RNPS1-225	ENST00000569709	BABAM1	Q9NWV8	329 aa		13.93	□□□□□ -0.18
RNPS1-225	ENST00000569709	CDHR2	Q9BYE9	1310 aa		13.92	□□□□□ -0.18
RNPS1-225	ENST00000569709	DUOX1	Q9NRD9	1551 aa		13.92	□□□□□ -0.18
RNPS1-225	ENST00000569709	AOC2	O75106	756 aa		13.92	□□□□□ -0.18
RNPS1-225	ENST00000569709	LMOD3	Q0VAK6	560 aa		13.92	□□□□□ -0.18
RNPS1-225	ENST00000569709	GRAP	Q13588	217 aa		13.92	□□□□□ -0.18
RNPS1-225	ENST00000569709	TNIP1	Q15025	636 aa		13.92	□□□□□ -0.18
RNPS1-225	ENST00000569709	SAPCD2	Q86UD0	394 aa		13.92	□□□□□ -0.18
RNPS1-225	ENST00000569709	GRAPL	Q8TC17	118 aa	Predicted RBP	13.92	□□□□□ -0.18
RNPS1-225	ENST00000569709	BCL2L13	Q9BXK5	485 aa		13.92	□□□□□ -0.18
RNPS1-225	ENST00000569709	TRMT112	Q9UI30	125 aa	Known RBP	13.92	□□□□□ -0.18
RNPS1-225	ENST00000569709	TSKS	Q9UJT2	592 aa		13.92	□□□□□ -0.18
RNPS1-225	ENST00000569709	SH3TC1	Q8TE82	1336 aa		13.91	□□□□□ -0.18
RNPS1-225	ENST00000569709	CASP8AP2	Q9UKL3	1982 aa		13.91	□□□□□ -0.18
RNPS1-225	ENST00000569709	MAP2K2	P36507	400 aa		13.91	□□□□□ -0.18
RNPS1-225	ENST00000569709	TMPO	P42166	694 aa	Known RBP	13.91	□□□□□ -0.18
RNPS1-225	ENST00000569709	TCIRG1	Q13488	830 aa		13.91	□□□□□ -0.18
RNPS1-225	ENST00000569709	ZNF408	Q9H9D4	720 aa		13.91	□□□□□ -0.18
RNPS1-225	ENST00000569709	YDJC	A8MPS7	323 aa		13.9	□□□□□ -0.18
RNPS1-225	ENST00000569709	HIRA	P54198	1017 aa	Predicted RBP	13.9	□□□□□ -0.18
RNPS1-225	ENST00000569709	FAM161A	Q3B820	660 aa		13.9	□□□□□ -0.18
RNPS1-225	ENST00000569709	TRPM4	Q8TD43	1214 aa		13.9	□□□□□ -0.18
RNPS1-225	ENST00000569709	ZC3H15	Q8WU90	426 aa	Known RBP	13.9	□□□□□ -0.18
RNPS1-225	ENST00000569709	ZNF428	Q96B54	188 aa		13.9	□□□□□ -0.18
RNPS1-225	ENST00000569709	PGAP2	Q9UHJ9	254 aa		13.9	□□□□□ -0.18
RNPS1-225	ENST00000569709	POLR2A	P24928	1970 aa	Known RBP	13.89	□□□□□ -0.19
RNPS1-225	ENST00000569709	SHTN1	A0MZ66	631 aa		13.89	□□□□□ -0.19
RNPS1-225	ENST00000569709	CCDC85C	A6NKD9	419 aa		13.89	□□□□□ -0.19
RNPS1-225	ENST00000569709	KRT24	Q2M2I5	525 aa		13.89	□□□□□ -0.19
RNPS1-225	ENST00000569709	TMC4	Q7Z404	712 aa		13.89	□□□□□ -0.19
RNPS1-225	ENST00000569709	HHIPL1	Q96JK4	782 aa		13.89	□□□□□ -0.19
RNPS1-225	ENST00000569709	CNOT7	Q9UIV1	285 aa	Known RBP	13.89	□□□□□ -0.19
RNPS1-225	ENST00000569709		H7C1D1	291 aa		13.88	□□□□□ -0.19
RNPS1-225	ENST00000569709	CA12	O43570	354 aa		13.88	□□□□□ -0.19
RNPS1-225	ENST00000569709	CDC37L1	Q7L3B6	337 aa		13.88	□□□□□ -0.19
RNPS1-225	ENST00000569709	MICALL2	Q8IY33	904 aa		13.88	□□□□□ -0.19
RNPS1-225	ENST00000569709	CHPF2	Q9P2E5	772 aa		13.88	□□□□□ -0.19
RNPS1-225	ENST00000569709	TNRC18	O15417	2968 aa	Predicted RBP	13.87	□□□□□ -0.19
RNPS1-225	ENST00000569709	BRPF1	P55201	1214 aa	Predicted RBP	13.87	□□□□□ -0.19
RNPS1-225	ENST00000569709	NEUROD2	Q15784	382 aa		13.87	□□□□□ -0.19
RNPS1-225	ENST00000569709	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.87	□□□□□ -0.19
RNPS1-225	ENST00000569709	LAS1L	Q9Y4W2	734 aa	Known RBP	13.87	□□□□□ -0.19
RNPS1-225	ENST00000569709	COL4A1	P02462	1669 aa		13.87	□□□□□ -0.19
RNPS1-225	ENST00000569709	PSMD14	O00487	310 aa		13.86	□□□□□ -0.19
RNPS1-225	ENST00000569709	CHL1	O00533	1208 aa		13.86	□□□□□ -0.19
RNPS1-225	ENST00000569709	WASHC4	Q2M389	1173 aa		13.86	□□□□□ -0.19
RNPS1-225	ENST00000569709	HDGFL1	Q5TGJ6	251 aa		13.86	□□□□□ -0.19
RNPS1-225	ENST00000569709	CCDC146	Q8IYE0	955 aa		13.86	□□□□□ -0.19
RNPS1-225	ENST00000569709	PLBD2	Q8NHP8	589 aa		13.86	□□□□□ -0.19
RNPS1-225	ENST00000569709	FAM89A	Q96GI7	184 aa		13.86	□□□□□ -0.19
RNPS1-225	ENST00000569709	DBNDD1	Q9H9R9	158 aa		13.86	□□□□□ -0.19
RNPS1-225	ENST00000569709	ATP5J2-PTCD1	G3V325	749 aa		13.85	□□□□□ -0.19
RNPS1-225	ENST00000569709	WDR43	Q15061	677 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
RNPS1-225	ENST00000569709	SAMD7	Q7Z3H4	446 aa		13.85	□□□□□ -0.19
RNPS1-225	ENST00000569709	USP48	Q86UV5	1035 aa		13.85	□□□□□ -0.19
RNPS1-225	ENST00000569709	DPF2	Q92785	391 aa		13.85	□□□□□ -0.19
RNPS1-225	ENST00000569709	CELF1	Q92879	486 aa	Known RBP	13.85	□□□□□ -0.19
RNPS1-225	ENST00000569709	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.85	□□□□□ -0.19
RNPS1-225	ENST00000569709	SCN9A	Q15858	1988 aa		13.84	□□□□□ -0.19
RNPS1-225	ENST00000569709	C6orf229	H3BNL8	230 aa		13.84	□□□□□ -0.19
RNPS1-225	ENST00000569709	RIMBP2	O15034	1052 aa		13.84	□□□□□ -0.19
RNPS1-225	ENST00000569709	HUNK	P57058	714 aa		13.84	□□□□□ -0.19
RNPS1-225	ENST00000569709	NOG	Q13253	232 aa		13.84	□□□□□ -0.19
RNPS1-225	ENST00000569709	SF3B3	Q15393	1217 aa	Known RBP	13.84	□□□□□ -0.19
RNPS1-225	ENST00000569709	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.84	□□□□□ -0.19
RNPS1-225	ENST00000569709	RTL5	Q5HYW3	569 aa	Predicted RBP	13.84	□□□□□ -0.19
RNPS1-225	ENST00000569709	DLK2	Q6UY11	383 aa		13.84	□□□□□ -0.19
RNPS1-225	ENST00000569709	ANKRD13D	Q6ZTN6	518 aa		13.84	□□□□□ -0.19
RNPS1-225	ENST00000569709	ISCA1	Q9BUE6	129 aa		13.84	□□□□□ -0.19
RNPS1-225	ENST00000569709	EGFR	P00533	1210 aa		13.83	□□□□□ -0.2
RNPS1-225	ENST00000569709	HOXB7	P09629	217 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms