RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 CLASRPQ8N2M8 674 aaKnown RBP23.24■■□□□ 1.31
AC009041.2-204ENST00000568394 CCDC34Q96HJ3 373 aa23.24■■□□□ 1.31
AC009041.2-204ENST00000568394 C9orf78Q9NZ63 289 aaPredicted RBP23.24■■□□□ 1.31
AC009041.2-204ENST00000568394 ZFYVE9O95405 1425 aa23.24■■□□□ 1.31
AC009041.2-204ENST00000568394 FAM227BQ96M60 508 aa23.24■■□□□ 1.31
AC009041.2-204ENST00000568394 PPP6R1Q9UPN7 881 aa23.24■■□□□ 1.31
AC009041.2-204ENST00000568394 BMS1Q14692 1282 aaKnown RBP23.23■■□□□ 1.31
AC009041.2-204ENST00000568394 ANKLE2Q86XL3 938 aa23.23■■□□□ 1.31
AC009041.2-204ENST00000568394 ERO1AQ96HE7 468 aa23.23■■□□□ 1.31
AC009041.2-204ENST00000568394 PTPN21Q16825 1174 aa23.23■■□□□ 1.31
AC009041.2-204ENST00000568394 CCDC73Q6ZRK6 1079 aa23.23■■□□□ 1.31
AC009041.2-204ENST00000568394 LRRN4CLQ8ND94 238 aa23.23■■□□□ 1.31
AC009041.2-204ENST00000568394 KNDC1Q76NI1 1749 aa23.23■■□□□ 1.31
AC009041.2-204ENST00000568394 URI1O94763 535 aaPredicted RBP23.23■■□□□ 1.31
AC009041.2-204ENST00000568394 TEX35Q5T0J7 233 aa23.23■■□□□ 1.31
AC009041.2-204ENST00000568394 TMC6Q7Z403 805 aa23.23■■□□□ 1.31
AC009041.2-204ENST00000568394 UBXN4Q92575 508 aa23.23■■□□□ 1.31
AC009041.2-204ENST00000568394 KIF1BPQ96EK5 621 aa23.23■■□□□ 1.31
AC009041.2-204ENST00000568394 CCDC8Q9H0W5 538 aaPredicted RBP23.23■■□□□ 1.31
AC009041.2-204ENST00000568394 CLSTN2Q9H4D0 955 aa23.23■■□□□ 1.31
AC009041.2-204ENST00000568394 CCDC171Q6TFL3 1326 aa23.22■■□□□ 1.31
AC009041.2-204ENST00000568394 KINO60870 393 aaKnown RBP23.22■■□□□ 1.31
AC009041.2-204ENST00000568394 DNAJC2Q99543 621 aaKnown RBP23.22■■□□□ 1.31
AC009041.2-204ENST00000568394 CPSF1Q10570 1443 aaKnown RBP23.22■■□□□ 1.31
AC009041.2-204ENST00000568394 ME1P48163 572 aa23.22■■□□□ 1.31
AC009041.2-204ENST00000568394 C1orf141Q5JVX7 400 aa23.22■■□□□ 1.31
AC009041.2-204ENST00000568394 USP44Q9H0E7 712 aa23.22■■□□□ 1.31
AC009041.2-204ENST00000568394 EPC1Q9H2F5 836 aa23.22■■□□□ 1.31
AC009041.2-204ENST00000568394 DNAI1Q9UI46 699 aa23.22■■□□□ 1.31
AC009041.2-204ENST00000568394 SOS1Q07889 1333 aaPredicted RBP23.22■■□□□ 1.31
AC009041.2-204ENST00000568394 PLA2G4DQ86XP0 818 aa23.21■■□□□ 1.31
AC009041.2-204ENST00000568394 FSD1Q9BTV5 496 aa23.21■■□□□ 1.31
AC009041.2-204ENST00000568394 BOLA2Q9H3K6 86 aa23.21■■□□□ 1.31
AC009041.2-204ENST00000568394 ZCCHC17Q9NP64 241 aaKnown RBP23.21■■□□□ 1.31
AC009041.2-204ENST00000568394 VPS53Q5VIR6 699 aa23.21■■□□□ 1.31
AC009041.2-204ENST00000568394 NPHP3Q7Z494 1330 aa23.21■■□□□ 1.31
AC009041.2-204ENST00000568394 PLEKHG3A1L390 1219 aa23.21■■□□□ 1.31
AC009041.2-204ENST00000568394 SEC31AO94979 1220 aaKnown RBP23.21■■□□□ 1.31
AC009041.2-204ENST00000568394 TMCO3Q6UWJ1 677 aa23.21■■□□□ 1.31
AC009041.2-204ENST00000568394 AACSQ86V21 672 aa23.21■■□□□ 1.31
AC009041.2-204ENST00000568394 C10orf67Q8IYJ2 551 aa23.21■■□□□ 1.31
AC009041.2-204ENST00000568394 AXIN2Q9Y2T1 843 aa23.21■■□□□ 1.31
AC009041.2-204ENST00000568394 NRDCO43847 1150 aa23.2■■□□□ 1.3
AC009041.2-204ENST00000568394 CCAR1Q8IX12 1150 aaKnown RBP23.2■■□□□ 1.3
AC009041.2-204ENST00000568394 IPO4Q8TEX9 1081 aaKnown RBP23.2■■□□□ 1.3
AC009041.2-204ENST00000568394 BRF1Q92994 677 aa23.2■■□□□ 1.3
AC009041.2-204ENST00000568394 USP6P35125 1406 aa23.2■■□□□ 1.3
AC009041.2-204ENST00000568394 STAP2Q9UGK3 403 aa23.2■■□□□ 1.3
AC009041.2-204ENST00000568394 CREB3L3Q68CJ9 461 aa23.2■■□□□ 1.3
AC009041.2-204ENST00000568394 ADAMTS13Q76LX8 1427 aa23.19■■□□□ 1.3
AC009041.2-204ENST00000568394 DIP2BQ9P265 1576 aa23.19■■□□□ 1.3
AC009041.2-204ENST00000568394 GYS2P54840 703 aa23.19■■□□□ 1.3
AC009041.2-204ENST00000568394 SF3A1Q15459 793 aaKnown RBP23.19■■□□□ 1.3
AC009041.2-204ENST00000568394 PI4K2BQ8TCG2 481 aa23.19■■□□□ 1.3
AC009041.2-204ENST00000568394 PGBD1Q96JS3 809 aa23.19■■□□□ 1.3
AC009041.2-204ENST00000568394 ATP5J2-PTCD1G3V325 749 aa23.18■■□□□ 1.3
AC009041.2-204ENST00000568394 PTCD1O75127 700 aaKnown RBP23.18■■□□□ 1.3
AC009041.2-204ENST00000568394 TDRD7Q8NHU6 1098 aaKnown RBP23.18■■□□□ 1.3
AC009041.2-204ENST00000568394 ZSWIM4Q9H7M6 989 aa23.18■■□□□ 1.3
AC009041.2-204ENST00000568394 ATP7BP35670 1465 aa23.18■■□□□ 1.3
AC009041.2-204ENST00000568394 GLRX3O76003 335 aaKnown RBP23.18■■□□□ 1.3
AC009041.2-204ENST00000568394 GPATCH3Q96I76 525 aa23.18■■□□□ 1.3
AC009041.2-204ENST00000568394 SALL3Q9BXA9 1300 aa23.18■■□□□ 1.3
AC009041.2-204ENST00000568394 ST3GAL1Q11201 340 aa23.17■■□□□ 1.3
AC009041.2-204ENST00000568394 KRBA2Q6ZNG9 492 aa23.17■■□□□ 1.3
AC009041.2-204ENST00000568394 ARGLU1Q9NWB6 273 aaPredicted RBP23.17■■□□□ 1.3
AC009041.2-204ENST00000568394 FLT4P35916 1363 aa23.17■■□□□ 1.3
AC009041.2-204ENST00000568394 CLCN6P51797 869 aa23.17■■□□□ 1.3
AC009041.2-204ENST00000568394 STRN4Q9NRL3 753 aa23.17■■□□□ 1.3
AC009041.2-204ENST00000568394 HSP90AA4PQ58FG1 418 aa23.16■■□□□ 1.3
AC009041.2-204ENST00000568394 TAF6LQ9Y6J9 622 aa23.16■■□□□ 1.3
AC009041.2-204ENST00000568394 PSMA5P28066 241 aa23.16■■□□□ 1.3
AC009041.2-204ENST00000568394 GCP02774 474 aa23.16■■□□□ 1.3
AC009041.2-204ENST00000568394 SYCP1Q15431 976 aa23.16■■□□□ 1.3
AC009041.2-204ENST00000568394 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.16■■□□□ 1.3
AC009041.2-204ENST00000568394 ZNF446Q9NWS9 450 aa23.16■■□□□ 1.3
AC009041.2-204ENST00000568394 CAPN2P17655 700 aa23.15■■□□□ 1.3
AC009041.2-204ENST00000568394 SFPQP23246 707 aaKnown RBP eCLIP23.15■■□□□ 1.3
AC009041.2-204ENST00000568394 NMIQ13287 307 aaPredicted RBP23.15■■□□□ 1.3
AC009041.2-204ENST00000568394 ANKRD24Q8TF21 1146 aa23.15■■□□□ 1.3
AC009041.2-204ENST00000568394 SSH2Q76I76 1423 aa23.15■■□□□ 1.3
AC009041.2-204ENST00000568394 CCT2P78371 535 aaKnown RBP23.15■■□□□ 1.3
AC009041.2-204ENST00000568394 STX1AQ16623 288 aa23.15■■□□□ 1.3
AC009041.2-204ENST00000568394 CEP57L1Q8IYX8 460 aa23.15■■□□□ 1.3
AC009041.2-204ENST00000568394 PDIA4P13667 645 aaKnown RBP23.14■■□□□ 1.3
AC009041.2-204ENST00000568394 FSIP1Q8NA03 581 aa23.14■■□□□ 1.3
AC009041.2-204ENST00000568394 IFNKQ9P0W0 207 aa23.14■■□□□ 1.3
AC009041.2-204ENST00000568394 REREQ9P2R6 1566 aa23.14■■□□□ 1.3
AC009041.2-204ENST00000568394 RNF20Q5VTR2 975 aa23.14■■□□□ 1.29
AC009041.2-204ENST00000568394 ZSWIM6Q9HCJ5 1215 aa23.14■■□□□ 1.29
AC009041.2-204ENST00000568394 TBX22Q9Y458 520 aa23.14■■□□□ 1.29
AC009041.2-204ENST00000568394 GOLGA8FQ08AF8 430 aa23.13■■□□□ 1.29
AC009041.2-204ENST00000568394 GOLGA8DPQ0D2H9 430 aa23.13■■□□□ 1.29
AC009041.2-204ENST00000568394 EDC3Q96F86 508 aaKnown RBP23.13■■□□□ 1.29
AC009041.2-204ENST00000568394 MAP3K2Q9Y2U5 619 aa23.13■■□□□ 1.29
AC009041.2-204ENST00000568394 LMAN1P49257 510 aa23.13■■□□□ 1.29
AC009041.2-204ENST00000568394 NFATC2IPQ8NCF5 419 aa23.12■■□□□ 1.29
AC009041.2-204ENST00000568394 CARD6Q9BX69 1037 aa23.12■■□□□ 1.29
AC009041.2-204ENST00000568394 RIMS1Q86UR5 1692 aaKnown RBP23.12■■□□□ 1.29
AC009041.2-204ENST00000568394 CHGBP05060 677 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms